Hemitrygon akajei (red stingray): 140730342 Help Entry 140730342         CDS       T11019                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism haka  Hemitrygon akajei (red stingray) Pathway haka03430   Mismatch repair Brite KEGG Orthology (KO) [BR:haka00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     140730342 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:haka03400]     140730342 (msh6) DNA repair and recombination proteins [BR:haka03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      140730342 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  140730342 NCBI-ProteinID:  XP_072906730 LinkDB All DBs Position 7:complement(35512213..35528960) Genome browser AA seq 1373 aa AA seqDB search MAKQRTLFSFFTKSPPLSTRSGSGPDIITAPTKKAGNDREVVKHSDSEAGKTRRSPPKKL RTTASSSPFFTREAKAAHKQAASPRTTTLSQTCDFTPGDLVWAKMEGYPWWPSLVYNHPT TKEHLRGKGKSLRIHVQFFDQPPTRGWVSVKYVKMYTGSDCKEAQRGGVYFSGKPEIRRA IVDADNALRKPREKRLELAVCTEPSEPEDEDSDDDDEGEKMEVDGPSIASEEDKENNSED ENKANKRPSRATRLACVKAKRRRIVVESDSDVESSEEEFKPDQQEGSSDECSSGVDENDI SEPETDTDPESPVKTPFKRKCSTTSAAVKTPSRSPPEAPKRPAAVSSGTKSKLSAFSAPE TFECQSSGGGLGGASTATVWDHEKLEWLKAGKRKDAARRREDHPDYDPSSLYVPDDFVSK CTPGMRRWWELKSQMLDTVIFYKVGKFYELYHMDAVTAVNELGLMYMKGTWAHSGFPEIA FGRFSDAMVQKGYKVARVEQTETPEMMEARCRSMAHPTKFDRVVRREVCRVITQGTQTYS VLDGSPSEGSSKYLLCLREAANADSPGHPRSYGVCFVDTSVGRFRLGQFQDDRHCSRLRM LVAHHAPVQVLTERGNPSMETRRVLKGCLLSAAQETLQAGSQFWDAAKTLKVLAEEGYFS EEPGATLPSAIRGMVAESDALGLTPAEGRELALSALGACVFYLKKCLVDQELLSMGNFEE YVPVDVGAQGPPGQAWSGRRLVLDGVTLTNLEVLRNSTTGTREGTLLEQLDGCCTYFGKR LLKQWLCAPLCHPPAIDDRLNAIEDLMAVPDKVTEVLELLRKVPDLERLLSRIHSIGSPL KSKDHPDSRAVLYEETTYSKKKITDFLSALEGFKIFQEVLQVMESSVDGFKSKLLRQVLS LKGSGSEGLFPDLSAELKRWDTAFDHQKAKNTGVITPKSGFDPDYDQALADIKETDASLR EYLEKQRKRLGCRAVVYWGTGRNRYQLEVPEAVADRHVPEEYELKSTKKGFKRYWTKAIE KLLDTMSNAEDRRDAALQDCMRRLFYNFDRNYKDWQAAVDCVAVLDVLLSLTHYSQSGEG PMCRPVVTFVSSEARPFLELRGSRHPCILKTFLGDFIPNDVVIGCEDVEGLENGRSNQQA SCLLVTGPNMGGKSTLMRQVGLLVIMAQLGCYVPAESCKFNPVDRVFTRLGASDRIMSGE STFFVELSETSSILQHATRHSLVLLDELGRGTATYDGTAIASAVVKELAENTKCRTLFST HYHSLVEDFSHSSAVSLGHMACMVENECEDPSQETITFLYKFIEGACPKSYGFNAARLAD IPEEIIQKGHKKAEEFEKTTISLRLFKEICFLVEDPNVNHLKLQRVLKMIAEL NT seq 4122 nt NT seq  +upstreamnt  +downstreamnt atggccaagcagcggaccttgttcagcttctttaccaagtctccgccactcagcacccgg agcgggtcgggacccgacatcatcacagcgcccacaaagaaggccggtaatgaccgggaa gtggtcaagcacagtgacagcgaagcgggcaagacccgccggagcccgcccaagaagctc cggactactgcctcctccagccctttcttcactagggaagcgaaagcagcccacaaacag gcggcgagtccccggacgaccaccctgagtcaaacatgtgattttacacctggcgatcta gtgtgggccaagatggaaggctatccatggtggccaagtctagtttataatcatcccact accaaggagcacctcagaggaaaagggaagtctcttcgtattcatgtccagttcttcgat caacctccaacaagaggctgggtcagtgtgaagtacgtaaagatgtacacaggttctgat tgtaaagaggctcagagaggtggtgtctactttagtggaaagcctgaaatccgcagggca attgttgatgcagataacgcccttcggaaaccgagagagaagcgtttagaattggcagtg tgcactgaaccttctgagccagaagatgaagacagtgatgatgacgatgaaggtgaaaaa atggaggtcgatggtccgtccatagcaagcgaggaggacaaagagaataacagcgaagat gagaataaagcaaataaacggccgtcacgggcgacacgtttggcctgtgtcaaggccaaa aggaggcggattgtggttgagtcggacagtgatgttgaaagctcagaggaagagtttaaa ccggaccagcaggaggggagcagcgatgagtgcagcagtggcgtcgatgagaacgacatc agtgagcccgaaacggacaccgatcctgagagtccagtaaagactcccttcaagcgcaaa tgcagcacgacttcagccgccgtgaagactccgtctcgttctcccccggaagctccaaag agaccggccgcggtgtcctcgggcaccaagtccaagctgtcggcgttctctgctccagag accttcgagtgccagtccagtggaggtggcctgggcggtgcctctaccgcgaccgtgtgg gaccacgagaagctcgagtggctgaaagcgggcaagaggaaggacgcggcgaggcgaagg gaagaccaccctgattacgacccctcctcgctgtacgtgccagacgacttcgtgagcaag tgcacgcccggcatgcggaggtggtgggagctcaagtcccagatgctggacactgtgatc ttctacaaggtcggcaagttttacgagctctaccatatggatgccgtcacagccgtcaac gagctgggcctgatgtacatgaagggcacttgggctcactccggtttccccgaaatcgct tttggccgcttctccgacgcgatggtccagaaggggtacaaggtggcgcgggtggagcag acggagacgcccgagatgatggaggcgcgttgcaggtcgatggcgcaccccaccaagttc gaccgtgtggtgcggcgggaggtgtgccgggttatcacgcaggggacgcagacgtacagt gtcctggacggcagcccctcggagggcagcagcaagtacctcctgtgcctgcgggaggcg gcgaacgccgactcaccgggccacccccgctcctacggcgtctgcttcgtcgacacctct gtcggcaggttccggctgggtcagttccaggacgaccgccattgctccaggctgcggatg ctggtggcccaccacgccccggtgcaggtgctgaccgagaggggcaacccctcgatggag accaggagggtgctgaaaggctgcctcctctctgccgcgcaggagacgctgcaggccggc tcccagttctgggatgccgccaagaccctgaaggtgctggcggaggagggctacttcagc gaggagccgggcgccaccttgccgtcggccatccgggggatggtggcggagtcagacgca ctgggcctgaccccggcagaagggcgggagctggccttgtcggctctcggcgcctgcgtg ttctacctgaagaagtgcttggtcgaccaggagctcctgtccatgggcaacttcgaggag tacgtgccagtggacgtgggggcccaggggccgccggggcaggcctggagcggacggcgg ctggtcctggacggggtcaccctcaccaacctggaggtcctgcgcaacagcaccacaggc acgagggagggcaccctgctcgagcagctggacggctgctgcacctactttggcaagcgc ctcctgaagcagtggctctgtgcccccctctgccaccccccggccattgatgaccgcctg aacgccatcgaggacctgatggcagtgccagacaaggtgactgaggtgctggagctgctg agaaaggtgcccgacctggaacggctcctgagccggattcacagcatcggctcgcctctg aagagcaaggaccatcccgacagccgggcggtgttgtatgaggagactacgtacagcaag aagaagattactgacttcctctctgccttggagggtttcaaaatcttccaggaggtgctg caggtcatggaatcgtccgtggacggcttcaaatccaagctattgaggcaggtgctgagc ctgaagggtagtggctccgaaggcctcttcccggacttgtcggccgagctgaagaggtgg gacacggcctttgatcaccagaaggcgaaaaacactggagtgattacgcccaagtctggc tttgatccggactacgatcaggcactggctgatatcaaggagactgacgctagcctccgg gagtacctggaaaagcagcgcaagaggctggggtgccgcgccgtggtgtactggggcacg ggcaggaaccgctaccagctggaggttccagaagccgtggccgaccgccacgtgcccgag gagtacgagctgaaatccaccaagaagggcttcaagcgttactggaccaaagccatcgag aagctgttggacacaatgagcaatgccgaggacaggcgggatgctgccctccaggactgc atgaggaggctcttctacaactttgacagaaactacaaagactggcaggcagccgtggac tgcgtcgccgttcttgatgtcttgctcagtctaacacactacagtcagagtggcgagggg cccatgtgcagacccgtcgtaacgttcgtcagcagcgaagcccggccattcctggagctt agaggctcgcgacatccatgcatcttaaaaaccttcctgggcgatttcatcccgaacgat gtggtgattggctgtgaggatgttgaaggtttagaaaatggtcgcagtaaccaacaggct tcctgcttgcttgtgacagggccaaatatgggtggtaaatccacactcatgagacaggtt ggcttattggtgatcatggctcaactggggtgctacgtacctgctgaaagctgcaaattt aacccagtggacagagtcttcactcgccttggagcctcagatagaattatgtcgggtgaa agcaccttctttgtggagctcagtgaaacgtccagcatcctccaacatgcaactcggcat tccctcgtgcttttggacgaattgggccgtggtacagcaacatatgatggcactgcaata gctagtgcagtggtaaaagagcttgctgaaaataccaagtgccgcactctattctcaaca cactaccattcccttgtggaagatttctctcattcctccgcagtcagtttaggacatatg gcttgtatggttgagaatgagtgtgaagatccaagccaggaaactatcacattcctctac aagtttattgaaggagcctgtccaaaaagttatggatttaatgcagcaagactagcagat attcctgaggaaataattcagaaaggacacaagaaagctgaagaatttgagaagactact atttccttgcgactcttcaaggaaatatgctttttggtggaagacccaaatgttaatcat ctcaagctacagagagtattgaagatgattgctgaactctga

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