Hemitrygon akajei (red stingray): 140730500
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Entry
140730500 CDS
T11019
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140730500 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140730500 (pnpt1)
03016 Transfer RNA biogenesis [BR:
haka03016
]
140730500 (pnpt1)
Enzymes [BR:
haka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
140730500 (pnpt1)
Messenger RNA biogenesis [BR:
haka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
140730500 (pnpt1)
Transfer RNA biogenesis [BR:
haka03016
]
Prokaryotic type
tRNA degradation factors
140730500 (pnpt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
140730500
NCBI-ProteinID:
XP_072907128
LinkDB
All DBs
Position
7:complement(61451329..61520034)
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AA seq
801 aa
AA seq
DB search
MAASCTGSVGSVKLLQCCRGTCRLSLWRLLAPRKSPPVASTSIGQLRRTHQQPWTTVGER
GRVAVDLGSSRKLEISTGKLARFADGSAMVQLGDTSVMVTAVSKTKPTSSQFMPLVVDYR
QKAAAAGRIPTTYLRKELGYTDSEILTSRVIDRSIRPLFPSGYFYDTQVICNLLAVDGIN
DPDVLAINGASAALALSDIPWNGPIGAVRVGLVDGECVINPTRKEMALSTLNLLLAGAPQ
SQVVMMEAAAANILQQDFCHAIKIGVKHTQQIIQAIQQLARKHGNSKRTPQKMFIPSREI
VEAARQLASEKICEVFKDFTHDKISRDDAINKIRLETEEQLRAKFSDVEPYDIMEAFNVV
SKEVFRNIIMNEYIRCDGRDLRSLRNIHCEVDLYKPLHGSALFQRGQTQVFCTVTFDSIE
SSVKTDLITTLISGVKEKNFMLHYEFPPYATNEIGKLIGQNRRELGHGALAEKALKPVIP
EEFPFTIRVTSEVLESNGSSSMASVCGGSMALMDAGVPVSAPVAGVAVGLITKTNPENPA
NIEDYRLLTDILGIEDYYGDMDFKMAGTSKGITALQADIKLAGLPLKIVMEAVQQASVAK
KEILNIMNKEIAKPREKRKENGPVLETIQVPLSKRARFIGPGGYNLRKLQAETGVTISQI
DEETFSIFAPTPNAMHEASEFISELCKDDQEQHLEFGAVYTATITEIRDIGVMVKLYPNM
TPVLLHNSQLDLRKIKHPSAIGLEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPATTVVKN
LSDRSSIVMGARDSTSSSASS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcctgtaccggcagcgttggctctgtgaagttgttgcaatgctgccgggga
acgtgtcgcttgtcgttatggagactgcttgcgcctcgcaaatctccgccggttgcgagc
accagcatcgggcagctgcggcgaacacatcagcagccttggaccactgtgggtgagcgt
ggccgagtcgccgtggatctgggcagcagcaggaagcttgaaatttccacagggaagctt
gctcggtttgcagatggatctgcaatggttcagttgggagacacatcagtgatggttaca
gctgtcagtaaaacaaagcctacttcgtcccaatttatgccattggtggttgattaccgt
cagaaagctgcagcagcaggaagaataccaactacatacttgcgaaaagaattgggctac
acagatagtgagatcttaaccagcagagtaattgatcgttcaatcagaccactatttcct
tcaggatatttttatgatacacaggttatatgcaatctccttgcagtggatggcatcaat
gatcctgatgttcttgcaattaatggagcatctgcagccttggcattgtctgacattcca
tggaatggtcctataggtgctgtaagagttggtcttgtagatggagaatgtgtaattaac
ccaactcggaaagaaatggcattgagcactttaaatttgctactggctggagcacctcaa
agccaagtagtcatgatggaagccgcagcagcgaatatattgcaacaggatttttgtcat
gctatcaaaattggtgtaaagcacactcagcaaatcatccaagccattcaacaactagca
cgcaagcatggaaattccaaaaggacacctcagaagatgttcattccatccagagaaata
gttgaagctgcaaggcagcttgcttcagagaagatctgtgaagtatttaaagattttacg
catgataaaatttcaagagatgatgccattaacaaaatcagacttgaaacagaagaacag
ttaagagcaaagttttctgatgttgaaccgtatgacattatggaggcatttaatgtggtt
tccaaagaggtgtttaggaatattatcatgaatgaatacataagatgtgacggcagggac
ttgagatctcttaggaacattcattgtgaagttgatctgtataaacctcttcacggatct
gcgttgtttcagaggggacagacacaggtcttctgtacagtaacttttgattctatagaa
tcaagtgtaaaaactgatcttatcaccactcttataagtggggtgaaagagaaaaatttc
atgctgcactatgagtttccaccttatgcaactaatgaaataggaaaattaattggtcaa
aataggagagagctaggccatggtgctcttgctgagaaagcattgaagcctgtgattcct
gaggagtttccatttacaataagagtaacatcagaagtactagaatccaatggttcatca
tccatggcatcggtatgtggaggaagtatggccttgatggatgcaggtgttccagtatca
gctcctgtggctggtgtagctgttggcctcatcacaaagacaaatccagagaaccctgcc
aacattgaagattaccgtctcctgactgatattttgggtattgaagattattatggtgac
atggattttaagatggctggtacaagcaaaggcattacagctttacaggcagacattaaa
ctagcaggattaccattgaaaattgtaatggaagctgttcagcaagcttcagttgccaag
aaagagatcttgaacataatgaataaagagattgctaaacccagggagaagaggaaagag
aacggccctgtgctagaaactatacaagtgccattatcaaaaagggccaggtttattgga
ccaggtggctacaaccttagaaaacttcaggctgaaactggagttacaatatctcagatt
gatgaagaaactttttcaatttttgcaccaactcccaatgctatgcatgaagctagtgaa
ttcataagtgaactctgcaaagatgatcaagaacagcatctcgagtttggagcagtttac
actgccaccataactgaaatacgggatattggagtaatggtgaagctatatcccaatatg
actccagttttattgcataattcacagcttgacctcagaaagataaaacatcccagtgca
attggcctggaagttggacaacagattcaggtgaagtattttggccgtgacccaacagac
ggaaggatgagactttcccgcaaagtactacaatctccagctacgacagtagttaagaac
ctgagtgacagaagtagcattgtaatgggggcaagagattctacatcatcgagtgcttcc
tcataa
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