Hemitrygon akajei (red stingray): 140730888
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Entry
140730888 CDS
T11019
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140730888 (arvcfb)
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140730888 (arvcfb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
HEAT
Cnd1
Atx10homo_assoc
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
140730888
NCBI-ProteinID:
XP_072907983
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All DBs
Position
7:complement(125203456..125742161)
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AA seq
984 aa
AA seq
DB search
MDDYDVRSAASILASVKEQEARFEKLTRALEEERRNVSMQLERANIPSDRASISHIGNSE
SFAWQHLVLQEQSPNNQTCKATMQEPHELVEETVTVEEDPGTPTSHVSVVTSDDGTTRRT
ETKVTKVVKTVTTRTVRQVPLGPDGLPLEGSSPAGSCTDSIDRRYMKNGDRYITPQANST
LTRVYNSYPDSYDNHHDLYRSYTGQDGFADVSDNYGSLSRGVHYRPRYAYMPRDNYRPDE
TYTLPSRNKYPVAQPQVQPDGTLDLNRSQPERFQPEPYGLEDDHRSLGPDDDGYELDGEP
EPDYSTAGRRAPTRANGRRPRRGYEDPIEAEIIEDRMPYLTGVYNAPLAQPERGSMASLD
RLGRRSPSIDSIRKDPRWRDPDLPEVIAMLSHHLDPVKSNAAAYLQHLCYENDKIKKEVR
QLKGIPILVGLLDHPKPDVHRRACGALRNISYGKDHDSKVAIKNCDGIPALVRLLRKTND
MEVRELITGTLWNLSSYEPLKIVIINHGLQTLTNEVIIPHSGWENEPNEDSKPRDAEWTT
VFKNTSGCLRNVSSDGSDARRRLRECEGLVDALLHALQSAVGKKDMDRKSVENCVCIMRN
LSYQVHREVPGADKFREPFTEQQTGTGGAQKKKKDDSGCFGGKKAKEEWFNQGKRNVDTD
KNFDTLDLPKRIEPVKGYELLYQPEVVRLYLSLLTESRNYNTLEAAAGALQNLSAGQWTW
SNYIRSTVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSVDGRNKDLIGNYAMHDLVSN
LSGGQQRPAKNLEEDTIVAILNTIHEIVTDSSSNARSLIQAQGIEKLVAINKSSQSVREM
KAAAHVLQTVWSYKELRNPLHKDGWNKSHFQPNVTTLPKGAKTGGKSSGYDDSTLPLIER
NQKDGNKWSGEMIPMEQFGPDTYSTLDQSEKERKYKTTDISGDAFERQPLRNDTNKRNFD
RINRASVNLVDAHDTKPQPVDSWV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatgattacgatgtaagatctgctgctagcattctagcttcggttaaagaacaggaa
gcccggtttgagaagttgaccagagcacttgaggaggagcgtcgtaatgtatccatgcaa
cttgagcgtgccaatattccctcagacagagcgagtatatcccacattggcaacagtgag
tcctttgcatggcagcatctagtgttacaggagcaaagtccaaataatcagacttgtaaa
gcaacaatgcaggaaccacacgagttggtggaagagactgttactgttgaggaggaccca
ggcactcccacctcccacgtgtcagtggtgacatccgatgatggaactacaagacgaaca
gaaactaaggttactaaagtggttaaaactgtgacaactcgaacagttcgccaagtacca
cttggtccagatggattgcccctggagggttcctcccctgctggcagttgtacagattcc
atcgacagaagatacatgaaaaatggagaccgctacatcacaccgcaggccaactccact
ttaactagagtctacaacagttatccagattcgtatgataatcatcatgacctgtatcgc
tcatacacaggccaggatggatttgcagatgtatctgataactacgggagcttgtcacga
ggagtccattaccgccctcgctatgcctatatgccacgtgacaactacagaccagatgaa
acctacacactgcctagcagaaataaatatcctgttgcccagccacaagtgcaaccagat
ggcacccttgacctgaatcggtctcagccagagcgtttccagccagagccgtatggactt
gaagatgaccacagaagtctaggacctgatgatgatgggtacgaactggatggggagcca
gaacctgattactccacagcaggtcgaagagcacccacaagggctaatggaaggagacca
aggagaggctatgaagacccgattgaagcagaaatcattgaagatcggatgccgtacttg
acgggagtgtacaatgcaccactcgctcagcctgaaaggggcagcatggccagcctcgac
cggcttgggaggcgctcaccttcaatagacagcatccggaaagatccccggtggcgtgat
ccggatctgccggaggttattgcaatgctcagccatcacctcgaccccgttaaatcgaat
gccgcagcctacctgcagcatctgtgctatgaaaatgacaaaataaagaaggaagtaaga
cagctgaaaggcattcctattctagtgggacttctggatcacccaaagccagatgtccat
cgtcgggcctgcggtgctctgagaaatatatcttatggcaaggatcatgacagcaaagtg
gcaatcaagaactgtgatggaattcctgcactggttcgtttgctacggaagaccaatgac
atggaagttagagaactaattacaggtacactgtggaacctgtcatcttatgaacccctc
aaaattgtgattattaatcacggcctccagactctcacaaacgaggtcatcatcccacat
tcgggctgggagaatgaacccaacgaggattccaagccacgtgatgctgaatggacaaca
gtcttcaaaaacacatcaggatgtctgaggaatgtgagttcagatgggagtgatgctcgt
cgaaggcttcgcgaatgcgagggtttggttgacgcacttctgcacgcactgcagtcagca
gtgggtaagaaggacatggaccggaagtcagttgagaattgtgtatgcattatgaggaac
ctctcctaccaagtccacagagaagtaccaggagctgacaagtttcgtgaaccattcacc
gagcaacaaactggaaccgggggtgcgcagaagaaaaagaaagatgattctggttgtttt
ggcggaaagaaggcaaaagaggagtggtttaatcaaggcaaaaggaatgtggacactgac
aaaaatttcgatactttggacttgccaaaacggattgaaccagtgaaaggttatgagctg
ctgtaccagcctgaagtggtgcgactctacctgtccttgctcacagaaagccgaaactac
aacacgttggaggcagcagcaggcgccctgcaaaatctgagtgctgggcaatggacatgg
tcgaattacattcgctcgactgtgcgtaaagagaaaggcctcccgatcctggtggaactg
ctgagatcagattctgataaggttgtacgagcagtggcaatagcgttacggaatctctca
gtggatgggcgtaataaggatctcataggtaattatgccatgcatgatctggttagcaat
ctgtcaggtggccaacaaagacctgccaagaaccttgaagaagacacgatagtggcgata
ctcaacactatccatgagattgtgaccgacagttcgtcaaatgcaaggtccctcattcaa
gcacagggcattgaaaagctggtggcaattaacaagtcaagccagtcagtgagggagatg
aaggctgcggcccatgtcttgcaaactgtatggagttacaaggagttgagaaaccctttg
cataaagatggttggaacaagtcccactttcagccaaatgtgactacgcttcccaaagga
gctaaaactggtggaaagtcaagtggttatgatgacagcaccctgccattaattgaaagg
aaccagaaagatggtaacaaatggtctggtgaaatgatacccatggaacagtttggtcca
gatacgtattctactcttgatcagagcgagaaagagcgcaagtacaagactacagatatt
tctggggacgcctttgaacggcaaccattgcggaatgatacaaataagagaaactttgac
aggattaatagggcctcagtgaatcttgtggatgctcatgacactaaacctcagcccgtt
gactcctgggtctaa
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