Hemitrygon akajei (red stingray): 140731110
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Entry
140731110 CDS
T11019
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140731110
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140731110
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
140731110
NCBI-ProteinID:
XP_072908505
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Position
7:161586718..161717268
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AA seq
1579 aa
AA seq
DB search
MELLTVLPAFFMHLCAVLAGMDSCYEQESGKAQRCMPEFCNAAFGRTVLASDVCGFPARE
EYCLQTGVTGVTKSCHVCDAHDPPQSHNASYLNDFHNEQEPTWWQSPSMLHGVQFPNSVN
LTLHLGKSFEITYIRLKFHTSRPESFAIYKRTREDSPWTPYQFYSASCRQTYSTSPGVFL
RPGDEERVPFCTEEFSDISPLTGGNVAFSTLEGRPSAYSFDTSPALQEWVTATDLLISLN
RLNTFGDDLFKDPQVLRSYYYAISDLSVGGRCKCNGHASECFTNDQGRLVCDCQHNTTGV
DCEKCRPFFHDRPWARGSSQAANPCLPCNCSGRSEQCTFNAELYRQTGHGGLCLNCRDHT
AGQHCEVCEENFHREHAFERCRPCNCSVLGSLSLQCDRNGNCTCKATVMGRKCDQCLPGF
HSLSEGGCRRCACHPDGSVGDCSPSNGDCTCKENVEGALCHSCKSGTFNLQPHNPHGCIS
CFCYGHSVACSSALEFREHRVVSTFSQDADDWRGQKSDGRESQLSWEKNRISLFPENGRW
EYFIAPEKFRGNQLLSYGQNLTFILDLENEEVRPFSLVLEGSENHTSVTLSPQVQKERSA
QQWEVTFILHEAEDSIHTPTLSSFQFQQMLSNLTTVKFGCLGASAFHLREVTLVTAVAGL
SPRATWVEECMCPKGYIGQFCEFCAPDYKREIPFGGPMTPCVPCTCNHHGTCNPDSGVCQ
CLHNTDGSSCEQCANGYYGNPFRGRYDDCKPCPCPNQSSCAVIEETKEVVCTSCLDGQTG
NRCEICDDGFFGDPLGQNGFGRPCRPCYCNGNSDLNAVGNCDHLTGDCLKCLFHTVGHHC
DRCEDGFYGNALDPISSNKCQPCNCSPVGSVLELLTCNAISGQCECLPNVTGRDCSQCEL
GYYDLQPGVGCLRCDCHAVGSRSSFCQAETGQCSCRPGVEGRSCDKCKLGYFDLSEKGCR
ACDCSPLGSLVMQCRENGSCICKKGFTGWKCEECQENYFYQPSSFHCQQCPVCYGLVQHE
VKQLGQRMNGLEEELDKFSSHPEQFYQLYTNHLQLALRDMETQSKEGPQMLLLQQVREVE
TSLLTISLKLTNITQASDCEGDGDKRCQLLSDSQLFISTSRRELQAAREALDNTLPVLTR
HFAGDRSQNWTRVVQESRTLVESHNREAAEVELIVRQALAASNQSYLLLSSIIEDNSIAG
DIAEAEDRLQVFQNKIEELEAEVDEVLKEAKRQYSYIQKTRSSTSVQLLNRTELELENWD
NLTTKIEDLESTLWSKDQQIKELLMEMEPQMKVLIRGFETKQSYEQLLSRVRTVQANANE
SLHQALQIQTAGTSLLKTLEDNKRMFSVKNLKSKGAFRKMGLRERIISEAKRKTAQAKRM
LGTAQSSSTLSNATAVQTSRVSRGIAKEAQKIRRQARNQALQSSSLRSQLQATQEQLDAQ
EKQVAAWKAVVQENTETAAEVFGETEALRKNMKQAKQSLDRDMKQLTELLRKIDILQVGR
VTDETLNKTRNQIGALRLAIDQKLMQKVRELEAASEMQLLKMKVFEKDIAEIQADKYNLE
DIVQNLPHGCYDQMGLRKQ
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atggagctcctgacagttctgcctgcctttttcatgcacctctgcgctgtcctggccggg
atggactcgtgttacgagcaggagtcagggaaagcccaaaggtgcatgccggaattctgc
aacgctgccttcggccggacggtgctggccagcgacgtttgcggctttcccgcccgggag
gaatactgcctgcagaccggcgtgactggagtcaccaaatcgtgccatgtgtgcgacgcg
cacgacccgccgcagagccacaacgccagttacctgaacgacttccacaatgagcaggag
cccacttggtggcagagcccgtccatgttgcacggtgtgcagttccccaactcagtcaat
ctgaccctacacctgggaaagtcgtttgagatcacctacatccgactgaagtttcacacc
agcaggccggagagctttgccatttacaagaggacgagggaggactccccctggactccc
taccagttttacagtgcttcatgccgtcaaacgtacagcacttctcccggggtctttctc
cgtccgggggatgaagagcgagtgccattctgcacggaggagttcagcgacatctccccg
ctgactggagggaacgtggccttctccaccttggaagggaggcccagcgcttacagtttt
gacaccagccctgcgctgcaggagtgggtgacagccactgatctgctaatatccttaaac
cgactgaacacctttggtgacgatctcttcaaagatccccaggtcctccggtcctattat
tatgccatatccgatctatctgtgggaggcaggtgtaaatgcaatggccatgccagtgag
tgcttcaccaacgaccagggcaggctggtgtgcgattgccagcacaacacaacgggcgtg
gactgtgaaaagtgccgtccgtttttccacgaccggccctgggcacgtgggtcctctcag
gctgcgaacccgtgtctgccctgcaactgcagtgggaggtccgagcaatgtaccttcaac
gcggagctgtatcgccagactggacacggagggctgtgcctgaactgcagggatcacacg
gctgggcagcattgtgaggtctgtgaagagaacttccacagggagcatgcatttgaacgc
tgtcgaccctgcaactgcagtgtcttggggtcactcagtttgcagtgtgaccgcaatgga
aactgcacctgcaaagcaaccgtcatgggaaggaaatgtgaccagtgcctgccggggttt
cactcgctgtccgagggaggatgcagacgatgcgcgtgccaccctgacggcagtgtcggt
gactgcagtccatccaacggagactgtacctgcaaagagaatgtggagggagccctgtgc
cacagttgtaagtcgggaacctttaacctccaacctcacaaccctcatggctgcatcagt
tgcttctgctatggacactcagtggcttgttcctcggccttggagttcagagagcatcga
gtagtgtccaccttcagccaagacgcagatgattggagaggacagaaatcagatggcagg
gaatctcagctgtcctgggagaagaatcggatcagtttgtttccagagaacgggagatgg
gaatatttcattgcaccagaaaagttccgggggaaccagctgctcagctatggccagaat
cttaccttcattcttgacttggaaaacgaggaagtgcggcccttcagcctggttctggaa
ggttccgaaaaccacacatcagtcactctttctccgcaggtgcagaaggaaaggtcggcc
cagcagtgggaagtcaccttcatactccatgaggcagaggacagcatccacacacccacc
ttgtccagcttccagttccaacagatgctctccaatctcaccacagtgaaatttggctgc
ctgggagcttctgcctttcacctgagagaggtcaccctggtgacggccgtggctggcctc
tcgccccgtgctacctgggtggaggagtgcatgtgtcctaaaggctacatcggacagttc
tgtgagttttgtgcccctgattacaagcgggaaatcccctttggaggtccgatgactccc
tgtgtcccctgcacctgcaaccatcatggaacgtgcaatcctgattcgggtgtttgccag
tgcttacacaataccgatggatcctcctgtgaacagtgtgcaaacggctactatggaaac
ccctttcggggcaggtacgatgactgcaaaccttgcccttgtcccaatcagtccagctgc
gctgtgatcgaagagacgaaggaagtggtctgcacaagctgccttgatggacagacaggg
aaccgctgtgaaatttgtgatgatggtttctttggtgatccattggggcaaaatggattt
ggccgcccctgtaggccgtgctactgtaacgggaatagtgacctcaacgccgtgggcaac
tgtgaccatctgacaggagattgcctgaagtgcttgttccacacagttggccatcactgt
gacaggtgtgaggatggtttctatgggaatgctctggaccccatctcatccaacaagtgc
caaccctgtaactgcagtccagttggatcagttcttgagcttctgacctgcaacgccatc
agcggccagtgtgagtgcctgcccaacgtaactggccgagattgcagccaatgtgagctg
ggctactacgatctgcagcctggtgtgggttgcctcagatgtgactgccacgctgtggga
tcgcgcagcagcttctgccaggctgagaccggccagtgcagctgtcgacctggtgtcgag
gggagatcgtgtgacaagtgcaagctgggatactttgacctctctgagaaaggatgtcga
gcctgtgactgctctccgctgggttccttggtgatgcagtgcagggaaaatggctcctgt
atctgtaagaagggcttcactggatggaaatgcgaggaatgccaggagaactatttctat
cagccctcctccttccactgccagcagtgccctgtctgctacggcctggtccaacatgag
gtgaagcagctggggcagcggatgaacgggctggaggaggaactggacaagttcagcagc
caccccgagcagttctatcagctctacactaaccacctgcagttagctctcagggacatg
gagacccagtcaaaggagggtccacagatgctccttctgcagcaggtcagagaggtggag
acttccctgctcaccattagcctgaaactgaccaacatcacccaagcctcggactgcgag
ggcgacggggacaaacgttgccagctgttgtctgacagccagctcttcatcagtaccagc
cgcagggagctgcaagcagcccgagaggccctggacaacacgttgcccgtgctgactcgt
cactttgctggcgacagatcccagaactggaccagggtggttcaggagtcccgcactctc
gtggaaagtcacaacagggaagcagcagaagtggaattaattgtgagacaagccctggct
gcatccaaccaaagctacctcctcctgtccagcatcatcgaggacaattccatagctggg
gacattgcagaggccgaggaccggcttcaggtatttcagaataaaatagaagagctggag
gcagaggtggatgaggtgctgaaagaggcaaagagacaatacagctacatccaaaaaact
cgaagctcaacatcagtgcagctgctgaatcgcacggaattggagctggagaactgggac
aatctaaccacaaagattgaggatctggagagcactctttggtccaaagaccagcaaatc
aaggagcttctcatggagatggagcctcagatgaaggtcttgatcaggggattcgaaacc
aagcagtcctatgagcagcttttgagtcgagtcagaactgtccaggccaatgcaaatgaa
tcactgcaccaagctctacagatacaaacagcaggaacgtccttgctgaaaaccttggaa
gataacaagcggatgttttctgtgaagaatctgaaaagcaagggggctttcaggaagatg
gggctcagagaaaggatcatttcagaggccaagaggaagaccgcccaggccaagcggatg
ctgggaactgcccagtcaagttccacactcagcaatgccacagctgtccaaacctcgcgt
gtcagcagaggcattgcaaaggaagcccagaagattaggaggcaagcaaggaaccaggct
ttgcaatcttcatcactgcgttcacagctgcaggccacgcaagaacaacttgatgcccag
gagaagcaggtggcagcttggaaggcagttgtccaggaaaacacagaaacagcagccgag
gtttttggtgagacagaggcgctgagaaagaacatgaagcaagcgaagcaatccctggat
cgcgatatgaagcagttgacagaactgctaagaaaaatagacatcctacaagttggccga
gtaacagacgaaaccctgaacaaaacacggaatcagataggagccctgagattggcaatt
gatcagaaactaatgcagaaagtacgggagctggaggctgcctccgagatgcagttgctg
aagatgaaagtatttgaaaaggacattgcagagatccaggcagacaagtacaacctggag
gacattgttcagaacttgcctcatggttgttatgatcaaatggggctcagaaagcaatga
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