Hemitrygon akajei (red stingray): 140731159
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Entry
140731159 CDS
T11019
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140731159 (strbp)
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
140731159 (strbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
SGP
Motif
Other DBs
NCBI-GeneID:
140731159
NCBI-ProteinID:
XP_072908656
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All DBs
Position
7:complement(168297095..168525093)
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AA seq
701 aa
AA seq
DB search
MKYIERMKKTIQKRPIRTFANDDRHVMAKHSAVYPSQEELEAVQNMVSTVECALKHVSDY
LDESNLQSVNVDADEDGAGDAKKSDSSESNSSEQSGRVLCGVMRIGLVAKGLLIKGDLDL
ELVLMCKERPTEKLLSIVCDNLPLQIQKLTEEKYEVEKCTEEAAIIVQNTKEPKLTLKIV
LSSPAVRDEVEKKQDGVENFAMKDPADLLDRQKCLNALASLRHAKWFQARANGLKSCVIV
IRILRDLCNRVPTWGPLKGWPLELICEKAIGTSNRPLGAGEALRRVMECLASGILLPGGP
GLHDPCEKELTDVLISMTSQEMDNITHSAQHALRLMAFGQIYKVLEMDPLPSTRSSLQKW
SRSLSERDGPLSAPLKRPYEDSMGDDKDPNKKMKRNLRKIMESKAIDVNQPMNALMRLNQ
IKPGLQYKLLSQSGPVHAPVFTMSVDVDGKTYEASGPSKKTAKLNVAVKVLQSMGCPTGM
DLKMGLESQEVEEKSSGDDKNETVSTNSSNDAVGCVPATSTNTLEMRTQGPILTASGKNP
VMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFKGAGPNKKVAKASAALAALEKL
FSGPSAANIKKKRTGPPTKGPIAAPAVAVQSLRGRGRGALNRGAFAGAAVTAAPGYLTPG
YGAPYGYSAAAPAYGLPGKRMLLFPVMKIPTYPVPLYSFFS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatattgaaagaatgaagaagaccatacagaagaggccaattcgaacttttgct
aatgatgatcgtcatgtcatggcaaaacattctgcagtatacccttcccaagaagagctt
gaagctgtacagaatatggtttctaccgtggaatgtgcactgaaacacgtatctgattat
ttggatgaaagtaatttgcagtcagttaatgtggatgcagatgaagatggagctggagat
gccaagaaaagtgattcttcagagagcaactcaagtgaacagagtggccgtgtcttgtgc
ggagtgatgcgaattggattggttgcaaaaggcttgctaataaaaggagacttggatttg
gagctggtgttgatgtgtaaagaaagaccaactgagaagttattaagtatagtctgtgac
aatctgccattacaaattcagaaactaacagaagaaaaatatgaagttgaaaaatgcaca
gaagaggcagccatcattgtgcaaaatactaaagaacccaagttgacactgaaaattgtt
ctcagttcaccagcagtcagggatgaagtggaaaagaaacaagatggagtagaaaatttt
gcgatgaaagatccagcggacttattggacaggcagaaatgcctaaacgccttggcgtct
ctgcgacatgccaaatggtttcaggcaagggcaaatggattaaagtcatgtgtaattgtg
attcgtattctgcgtgatttatgcaacagagtacccacatggggaccattgaaaggatgg
cctctagagcttatttgtgaaaaagccataggtactagtaataggccattaggggctggt
gaagccctgagacgtgtaatggagtgcttggcatctgggattcttctacctggtggtcca
ggattgcatgacccttgtgaaaaagagttaactgatgtattgatctcaatgacttcacaa
gaaatggataatattactcatagtgcccagcatgcacttagacttatggcttttggtcag
atctacaaagtactggagatggaccctcttccatcaacgagatcctcacttcagaaatgg
tctcgatcattgagtgagcgagatggacctctctcggcacctttgaagagaccgtatgaa
gatagtatgggagatgacaaagatccaaacaaaaagatgaaaagaaacctgcggaaaata
atggaaagcaaagcaatagatgttaaccaacctatgaatgctctgatgagattgaatcag
attaaacctggactgcagtacaagcttctctcacagtctggtccagtgcatgcgcctgtt
ttcactatgtcagtagacgttgatggcaaaacctatgaggcttcaggaccatctaaaaaa
actgccaaacttaatgttgcagttaaggtgttacagtccatgggctgtccaactggtatg
gatttgaagatgggtttggaatctcaggaagtggaggaaaagtcctctggcgatgataaa
aatgaaactgtttctacaaactccagtaatgacgcagttggctgtgttcctgctaccagc
accaatactctcgagatgagaacgcagggccctatcctaacagccagtggaaaaaaccct
gttatggaactgaatgaaaagagaaggggtttgaaatatgaattgatatcagaaactggc
ggaagtcatgacaaacggtttgtcatggaggtggaagtggatggtcagaaattcaaggga
gcaggtcctaataagaaagtagcaaaggccagtgctgctctagctgcccttgaaaaactg
ttctctggtcccagtgctgccaacatcaagaaaaaaaggacaggtcctccgactaagggt
ccaatagctgctccagcagttgccgtccagtcactcaggggcagaggcagaggagctttg
aatagaggagcttttgccggcgcagcagtaacagctgctccagggtatctaacaccaggt
tatggtgcaccatatggatacagtgctgctgccccggcttatggtttgccaggcaagaga
atgcttctgttcccagttatgaaaattccaacatatcctgttcccctttactcctttttc
agctaa
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