Hemitrygon akajei (red stingray): 140731179
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Entry
140731179 CDS
T11019
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140731179 (gapvd1)
Membrane trafficking [BR:
haka04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
140731179 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
EF-hand_14
Motif
Other DBs
NCBI-GeneID:
140731179
NCBI-ProteinID:
XP_072908705
LinkDB
All DBs
Position
7:171557501..171685751
Genome browser
AA seq
1501 aa
AA seq
DB search
MVKPDLHTLAHHLKQERLYVNSEKQLLQRLNAEVLKTAEKLYCSAWIAKQQRINLDRLIL
TSVEASPAECCKHAKILEDTQFVDGYKQLGFQETLYGEFLNRLRENPRLVASCLVAGEKL
NHESTHSVILTVFTALYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRKGACTFSI
LFKLFSEGLYSAKLFLTATLHEPIMLLLVEDEDHLETDPSKLIERFTPAQQEKLFGEKGT
EQFKRRVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCMECLDIG
EVKAMCTDLLLAYFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMMGSEEAD
PRLKNSLSKFDKSCVAAFLDVIIGGRTVETPPMSSVNLLEGLSRTVVYMTHSQLLNLVSF
ARHVMPGELLREEDRMALENLIINVPHHRTGKSNSLELTPSSTPQLSPATTPANKKNRLQ
IGQQLASITAWDTSATNLTAHIPLVAPFAGRNKIRTNEAKEHTEHENAIQETLQEVQPEE
VLVISLGVASQMTPGMMSENEVLSMQLSESGQGEVPVEDGKLHGKPDKTLRFSLCSDNME
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQDIAGAAAENMLGSLLGLPG
SSSVLLDPCTGSTISETTSEAWSVEVLPSDSEATDLKQEERLQELESCSGVGSTSDDTDV
REVSSRPSTPGLSVVSGFLHNLTGISVTSEDIPNKVEDIRSECSSDFGGKDSVTSPDVEE
VVQGGHQMTSSLSQTDTLLAMFDPLSSDASTIPSIVRPKVHYARPSHPPPDPPILEGAIG
GSDARLPPFASHICCQTEAELLKQRHSFPERLVRSRSSDVVLASRRPMSDPGWNIPGSRR
AANEELFASGAATGICGPTSSPSKDSLGEDRKDSDDEKSDRSKSWWKKRFVSAIPKAPIS
FRKNKDKQEKDREDGAQERFQAMSGWLILPFIKNDEPIPKLNAQAQAAEDILDKYRSAIK
RSSPSEAVANDEVTEVIGDESVHDSPRDETLQNLSADDLPDSASQTAQTQDSTFSFRDTK
KKLRMALCSADSIAFPLVSHSATRNGPPGGLDQGESEDNEIVCFLKVQLAEAINLQDKHL
MAQIQETMRCVSRFDNRTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQR
VLRDKEVANRYFTTVCVRLLLESREKHILEFIKDFQNLTAADDKTALVEEFLQSLYGAMA
QDVIWQNASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQLFYEHIQRLCKVVTA
NHRALQIPEVYLKEAPWPSAQSEVRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVP
GADDFVPVLVFVLIKANPPCLLSTVQYINNFYASRLSGEESYWWMQFTAAVEFIKTIDDR
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcctgaccttcacactttggctcatcacctcaagcaagaacgtctttatgtg
aactctgaaaaacaattgcttcagcggttaaatgctgaagtgctcaaaactgcagaaaag
ctatactgttcagcatggattgcaaagcaacagcgaattaacttagaccgtctaatatta
acaagtgttgaagcatctccagcagaatgctgcaaacatgcaaagatcttggaggatact
cagtttgtggatggttacaagcagttgggtttccaagagacgctgtatggtgaattttta
aatcggctcagagaaaacccacgactcgttgcctcatgtcttgttgctggagagaagctt
aatcatgagagtacccacagtgtcatccttacagtgtttactgccctttatggaaactgc
attatgcaggaagatgagagttacctcctacaggtgttgcgttacctgattgagtttgaa
ctgaaagaaagtgataatcctcggcggttgcttcgaaaaggtgcctgtaccttcagcatt
ttattcaaacttttttcagaggggctgtactcggccaagctttttctcactgcgaccttg
cacgaaccaataatgctgcttcttgtggaagatgaggatcacttggaaactgatccaagt
aagcttattgaaagatttactccagcacaacaggagaaactttttggggaaaaaggcaca
gagcagttcaaacggagggtgcaggagatggtagaaagcaacgaagcaaagctagtagct
ttggtaaacaaatttattggatatctcaaacagaatacgtactgttttccacatagctta
cgttggattgtatctcaaatgtataaaaccttatcttgcatggagtgtctggatattggg
gaggtgaaggccatgtgcacagatctattgcttgcctacttcatttgcccagcaatcgtg
aatccagaacagtatgggataatttctgatgctccaattaatgaagtggcaagatttaat
ttgatgcaggtgggtcaactcttacaacagttggcaatgatgggaagtgaggaagctgat
ccacgactgaagaacagcctttccaagtttgataaaagttgcgttgcagctttcttggat
gtgatcattggaggccgtacagtggaaacccctcccatgtcctcagtgaacttgctggag
ggactcagcagaactgtggtctacatgacacacagccaacttctgaacttggttagcttt
gcaagacatgtaatgcctggggaattgctaagagaagaggacagaatggctctggaaaac
cttatcattaatgttccacatcatagaacggggaagagcaatagtcttgagctgactcca
tccagcacaccccagctatctcctgcgactactccagccaacaaaaaaaatcgactacaa
ataggacaacagttagcatccattactgcctgggatacctccgctacaaatctgactgct
cacatccctcttgtagctccatttgctggaagaaataaaatccggacaaatgaagccaag
gaacacacagaacatgaaaatgcaatacaagaaaccctgcaggaagtgcagcctgaagaa
gtattggttatttcactgggcgttgcttcgcaaatgacaccagggatgatgtctgaaaat
gaggtgctgagcatgcagctttctgagagtggtcagggtgaagtacctgtagaggatgga
aaactccatgggaaaccagataaaactctacgcttttctctatgcagtgataatatggag
ggaatatcagaaggaccttcaaaccgatcaaactctgtgtcgtcattggatctggaagga
gaatcagtctctgaacttggagcaggaccgtctgggagtaacggggttgaggctttacaa
ttgttggaacatgagcaagccaccacccaagacaatcttgatgacaaactccgtaagttt
gaaattagggacatgatggggctgaccgatgacagggacatttcggaaactgtgagtgag
acttggagcacagatgtcctgggaagtgattttgatccgaacattgatgaagatagacta
caagatattgcaggtgcagcagcagagaatatgctgggtagtttgctaggattgccaggt
tcaagttcagtgctactcgatccctgcacagggtcaacgatctctgaaacgaccagtgag
gcttggagtgtggaggttctgcccagtgactcagaagctacagatctgaaacaagaggag
cgattacaggagctggaaagttgctctggagttggcagcacatctgatgataccgatgtg
agagaagtgagctcaaggcccagtactcctggacttagtgttgtgtcaggctttttacac
aatttaacaggcatcagtgttacctcagaagatatacccaacaaggttgaggatatacga
tcagaatgcagctctgactttggaggaaaagattctgtaacaagccctgatgtagaggaa
gttgtacaaggtggacatcagatgacttcttcactttcccagacagacacattgcttgca
atgtttgatccactgtcttcagatgcttcaaccataccatcaatagtcaggcctaaagtg
cactatgcaagaccatcacacccaccaccggatcctccaatattggaaggtgctataggg
ggcagtgacgcccgattaccaccgtttgcatcacacatttgctgccaaactgaagctgag
ctgcttaaacagcgacattcctttccagaaaggctggtacgcagcaggagttctgatgtt
gttttggcatctcgaagaccaatgagtgatcctgggtggaatattccaggcagtagaagg
gcagcaaatgaagagctgtttgcatctggggcagcaactggaatctgtggaccaacttca
tctccaagcaaagactccctgggagaggatagaaaggacagtgacgacgagaaatcggat
cgtagcaaatcttggtggaagaagcgctttgtatctgctattcctaaagctcccatttcc
ttcaggaagaataaagataagcaagaaaaagacagagaagatggtgcacaggaaaggttt
caggccatgtcaggttggctgatcctacctttcataaagaatgatgagccaatccccaaa
ttgaatgcacaagcccaggctgctgaggatattctggataaatacagaagtgctattaaa
aggtccagtccaagtgaagcagttgcaaatgatgaggttacagaggttattggagatgaa
agtgtgcatgattcgccacgtgacgaaactcttcagaacctttcagcagatgatctgccg
gactcggccagtcagactgcccagactcaagactctacattctcctttagggacacaaag
aagaaattgcgaatggccctgtgctcagctgactcaattgccttccctttggtgagccat
tcagcaacaagaaatgggcctcctggaggactggatcagggagaatctgaggataatgag
attgtctgttttctcaaagttcagctggccgaagccatcaatttgcaagataagcacttg
atggcacagattcaggaaacaatgcgctgcgtcagcagatttgacaacaggacctgtcgc
aaattgcttgctgccatcgctgaggactatagaaaacgagctccatatattgcttatctg
acacgatgtcgccaggggctccagactacacaagcccaccttgagagactcttgcaaagg
gtgctgagagataaagaagttgccaacagatatttcacaacagtttgtgtgaggctattg
cttgaaagtagggagaagcatattctggaatttattaaagacttccagaatctcactgca
gcagatgacaaaacagccttagtggaagaattcttgcagtcgttgtatggagcaatggca
caggatgttatctggcagaacgccagtgaggaacagctccaggatgcacagatggcaatt
gagcgcagtgtcatgaaccgcattttcaaacttgccttctaccccaatcaggatggtgat
attttacgtgaccagctcttctatgagcacattcaacgtctctgtaaagtcgtcactgca
aatcacagggcacttcaaattccagaggtgtatttgaaagaggctccatggccgtctgca
caatcagaggttcgaacaatcaatgcatacaagaccccaagagataaggttcagtgtatc
ctgcgaatgtgctccaccataatgaatctgttaagcttggccaatgaggactcagtccct
ggggcagacgactttgttcccgttcttgtctttgtcctcatcaaggctaacccaccctgc
ctgctgtccactgttcagtacatcaataatttctatgccagccggctcagtggagaggaa
tcctattggtggatgcagttcacagcagcagttgaattcattaaaaccattgatgatcgc
aagtga
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integrated database retrieval system
