Hemitrygon akajei (red stingray): 140731673
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Entry
140731673 CDS
T11019
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140731673 (vps53)
Membrane trafficking [BR:
haka04131
]
Protein recycling
Others
EARP complex
140731673 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
140731673 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
GrpE
FBF1
COG4_N
ATG17_like
Laminin_II
Snf7
HAUS1
Syndetin_C
Sec8_N
NBD94
COG3_N
Med11
WHD_1st_NFRKB
COG5_N
TPR_CAND1
Motif
Other DBs
NCBI-GeneID:
140731673
NCBI-ProteinID:
XP_072909426
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All DBs
Position
8:complement(15855084..16129971)
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AA seq
834 aa
AA seq
DB search
MMAATMEEEELEFVDELEGVLHLTPEVQQAIEQVFPSQDPLDRADFNAVEYINTLFPTEQ
SLANIDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFAKIKDIKD
KAEKSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVAN
LMQGVVNVLEHFHKYMGIPQIRQLSERVRAAQTELGQQILADFEEAFPSQGTKRPAGPSN
ILRDACLVANVLDPKIKQEIIKKFTKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLV
DYEEKYGRMFPVEWCMSERITVEFCHVTRIELAKIMRTRAKEIEVKLLLFAIQRTTNFES
LLAKRFSGSTLTDGIVKKPEPAPPPTNPILEDETGVDCDPEKESDLEKPKKPKVPDNPFH
GIISKCFEPHLYVYIESQDRNLNELIDKFVADFKAHGPPKPNTDDGGVVLPSCADLFVYY
KKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSTGLTISSLLKEKEG
SEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLVERINLMSEMDTFSTVI
SNSIQLLVQDLDAACDPALTAMSKMPWQNVEHVGDQSAYVTSIIQHIKQNVPIIRDNLAS
TRKYFTQFCIKFVNSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVV
RKAPASYTKIVVKGMTRAEMILKVVMAPHEASVVFVDNYIKLLADCSTDTFQKVLDMKGL
KRSEQSSMLELFRQRLPIPPSGGENTLTTALSAPSPEQESSRIRKLEKLIKKRL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccaccatggaggaggaagagctggagtttgttgatgagttggaaggggtt
ctgcacctgacgccggaggtgcagcaggcaatcgaacaggtgttccccagccaggatccc
ttggatagggctgatttcaatgcagtggaatatatcaacacactcttcccaactgaacag
tctttagccaacattgatgaagttgtaaacaagataagactgaagataagacggttggat
gataacattcgaacagtggtaagaggacagacgaatgtaggacaagatggccgacaggct
ttggaagaagcacagaaagccattcaacagctttttgccaagattaaggacattaaggac
aaggcagagaaatcagaacagatggtcaaggaaatcacacgggatattaaacaacttgat
cacgccaaacgtcaccttacaacttccatcaccacacttaatcacctgcatatgcttgca
ggtggtgtcgactccttggaggctatgactcgccgtagacagtatggagaagtggctaac
ctcatgcaaggggtggtaaacgtattggaacattttcataagtacatgggcattccgcag
atccgccagctctccgaaagagtacgagccgcacaaaccgaactgggacagcagatcctg
gcagactttgaagaggccttcccatcccagggaactaagagacctgcaggtcccagtaac
atcctgcgtgatgcctgccttgttgccaacgtgctggaccccaaaattaaacaggagatc
atcaaaaaatttacaaaacaacatctttcagagtaccttgttctgttccaggaaaaccaa
gatgtggcgtggctagataagatagatcgacggtatgcttggatcaaacggcagttggta
gactacgaggagaaatatggccggatgtttccagtggaatggtgcatgagtgaaaggatc
actgtggaattctgccatgttaccaggattgagctggctaaaataatgcgaacaagagcc
aaggaaattgaagtaaaattgctgctgtttgctattcaaagaacaacaaattttgagagt
ctgttggccaagcggttctcaggcagcacgctgacagacggcattgtgaaaaagccagaa
cctgcgccacctcctacaaatccaatcctggaggatgaaactggagtggattgcgaccct
gagaaagaaagtgatctggagaagccaaagaagcccaaagtcccagacaaccctttccat
ggcattatctccaaatgctttgagccacacttgtatgtttacatcgagtcccaggatagg
aatctcaatgaactgatagacaaatttgtggcagatttcaaagcccacggtcctccaaag
ccaaacactgatgatgggggagtagtgctccccagctgtgccgatttatttgtctactac
aagaaatgcatggtgcagtgctcacaactcagcaccggagagccaatgattgctttaacc
accattttccagaaatacttacgagaatatgcatggaaaatcctctctggaaatctgcct
aagaccacaagcagcagcactggcttgaccatctctagtctgctgaaggagaaggaaggc
tcggaggttgccaagttcacactggaggagctctgcctcatttgcagcatcctcagcaca
gcagagtactgcctggcaacaacacaacagctcgaagaaaagctcaaagagaaggtggat
gtaagtctggtagaaaggattaacctgatgtcagaaatggacaccttcagcacagtgatt
tctaatagtatccagctgttggttcaggacttggatgcagcctgtgatcctgcgctgact
gctatgagtaaaatgccatggcaaaatgtggaacatgtgggtgaccagagtgcatatgtt
acttctataatccaacatatcaaacagaacgtgcccatcatccgagataacctggcttcc
actcgcaaatactttactcagttctgcatcaaatttgtcaactccttcattccaaagttc
atcaaccaccttttcaagtgcaaaccaatcagcatggtaggagcagagcagcttctgctg
gacactcattccctcaaaactgttttgcttgaccttccttccattggttcacaagtggta
cgaaaggctccagcgagctacacgaagatcgttgtcaaaggcatgactcgtgcagagatg
attttgaaggtggttatggctccccatgaagcatcggtggtgtttgtagataattacatc
aaacttctggcagactgcagcactgatacattccagaaggttctcgacatgaagggttta
aagcggagtgagcagagtagcatgctggaactgttccgtcaaagactgccgattcctcct
tcggggggagagaacactttaacgacggcactgtctgccccttccccggagcaggagtct
tctaggatccgcaaactggagaaactcattaaaaagaggttgtaa
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