Hemitrygon akajei (red stingray): 140731678
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Entry
140731678 CDS
T11019
Symbol
srsf1b
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
haka05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140731678 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140731678 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140731678 (srsf1b)
Spliceosome [BR:
haka03041
]
Common components
Common spliceosomal components
SR proteins
140731678 (srsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
140731678
NCBI-ProteinID:
XP_072909438
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All DBs
Position
8:complement(16461377..16466816)
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AA seq
251 aa
AA seq
DB search
MQNHSGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGSIRDIDLKNRRGGPPFAFV
EFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGQTPRGRYGPPSRRS
EYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMSYAVRKLDNTK
FRSHEGETAYIRVKVDGPRSPSYGRSRSRSAVEPEAVAEVAAEAVVTLPDEAEDLPATHP
VIADRVLVARL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccacagcggtgtaatccgtgggccggcaggcaacaacgactgtcgaatatac
gtgggcaacctgccgccggacatccgcaccaaggacatcgaggacgtcttctacaagtac
ggcagcatcagggacatcgacctgaaaaatcgccgcggcggcccgcccttcgctttcgtc
gagttcgaggacccgagagatgccgaagatgctgtatatggtcgcgatggttacgattac
gatggctaccgtctgcgtgttgaatttccacggagtgggagagggactggaagaggagga
ggaggtggtggaggtggccaaacaccaaggggaagatacggacccccctctaggcgttca
gagtacagagtggtggtttcaggacttcctcccagtggtagttggcaggatttgaaagat
cacatgcgggaagcaggtgatgtatgttacgctgatgtttttcgtgatgggactggtgtc
gtggagtttgttcgcaaagaagatatgagctatgcagtacgaaagctggataacacaaaa
ttccgatcacatgagggagaaacagcatatatccgtgtgaaagttgatggtccacgaagt
ccaagctatggaagatctcgttcacgtagcgcagtcgaaccagaagccgtagccgaagtc
gcagcagaagccgtagttactctcccagacgaagcagaggatctccccgctactcacccc
gtcatagcagatcgcgttctcgtagctagattgtaa
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