Hemitrygon akajei (red stingray): 140731683
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Entry
140731683 CDS
T11019
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140731683 (ddx52)
Enzymes [BR:
haka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140731683 (ddx52)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
90S particles
Helicases
140731683 (ddx52)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Motif
Other DBs
NCBI-GeneID:
140731683
NCBI-ProteinID:
XP_072909450
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Position
8:16965625..17000765
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AA seq
611 aa
AA seq
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MAMEALDLFRALGAGATFDWKRFGRDAERLRITKSSNAILSETSADLDFFKNQHTANRKL
VENISKSRGQKDRSDGECEDLCIFTSTGKRKLAINESEKSKRSKKDAKDDFPSVKDDEGI
TSSLECKIKRSPGTELSAEQLEHQRREKINKFRRKHRIYVDGTDIPEPVATFEQLRQEYK
VHPKIIQHMQEAGFQLPTPIQMQAIPIMLHNREILACAPTGSGKTLAFCVPLLTCLKQPM
NKGFRALILSPTRELASQTHRELVKLSEGIGFRIHMINKAAEAAKKFGPKTSNKFDILVT
TPNRLIYLLKQEPPALDLSRVEWLVVDESDKLFEDGKSGFRDQLATIFLACTSHNVRRAM
FSATFAMDVEQWCKLNLDNVVSVSIGIRNSAVETVEQELLFVGTESGKLLAMRDLIKKGF
SPPVLVFVQSIERAKELFREFIYEGINVEVIHAERTQQQRDNVVFSFRAGKIWVLICTAL
MARGIDFKGVSLVINYDFPTSAIEYIHRIGRTGRAGHQGKAITFFTEDDKPLLRSIANVI
KQAGCPVPDYMMQIDKLQSKQRKRLIKNPIKRATIKTTPKYFLEMAAKKKKLIQKSKKKK
EKSQKTSVTSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaggcgttagacctgttccgagcgctgggcgccggcgccacgtttgactgg
aagcggttcggccgcgacgccgagaggctgaggatcacgaaatcaagcaatgctatctta
agtgaaacctctgcagaccttgacttttttaagaatcagcatactgcaaatagaaagcta
gtggagaatatttcgaagagcagggggcagaaagaccgttctgatggagagtgtgaagat
ctctgcatctttacatccacaggaaaaagaaaacttgcaattaatgaatcagaaaagagc
aaaaggagcaagaaggatgccaaagacgattttcccagtgtaaaggatgatgaaggtata
acatcctcgcttgaatgcaagatcaaaagaagtcctggcacagaactcagtgctgagcaa
ctggaacaccagcgacgagaaaagataaacaagttccggcggaagcatcggatctatgtg
gatgggactgatatccctgaaccagtcgctacctttgagcaactccgtcaagaatacaag
gtccacccgaagattattcaacatatgcaggaagctgggttccaacttcctactccgata
cagatgcaagccatacccatcatgctacataatcgtgaaatcctggcctgtgccccaact
ggatcaggaaagaccttggctttttgcgttccactcttgacgtgtctaaaacagccaatg
aacaaaggcttcagggcattgatcttatctcctactcgagaacttgccagtcagactcat
cgggagctagtaaaactctctgaaggtattggttttagaattcacatgatcaacaaagca
gctgaagctgccaaaaagtttggtcccaagacatcaaataaatttgatattttggtgaca
actccaaacagactgatttacctgttaaaacaagagcccccagcactggatctcagcagg
gtggagtggttggttgttgatgaatcggataaattgtttgaggatggcaaatctggattt
cgagatcagttggccactatcttcctggcctgtacttctcataatgtgcggcgagctatg
ttcagtgccacatttgcgatggatgtggagcagtggtgcaagctgaacttggacaacgtg
gtttcagtgtcaatcggtataaggaactctgctgtggagactgttgagcaggagttactt
tttgttggtactgaaagtggaaaattgttggcaatgcgagacctcattaaaaagggtttt
tcacctccagtgctggtttttgttcagtccattgaaagagcaaaagagctcttccgtgag
tttatctatgaaggtattaacgttgaagttatccatgcagaaagaacacagcaacagaga
gataatgttgtgttcagcttcagagcaggaaaaatttgggttctcatctgcactgcactc
atggcccgaggtatcgacttcaaaggagtgagtttagtcatcaactatgattttccaacc
agtgccattgaatacatccatagaatcggacgtactggaagagctggtcaccaaggaaag
gctattacgtttttcacagaagatgataaaccactactgcgaagcatagcaaatgtcatc
aaacaagctggctgccctgtaccagattacatgatgcaaatagataaattgcaaagtaaa
caaagaaaaaggttgatcaaaaatccaatcaaacgagccaccatcaagaccacaccaaaa
tacttcctagaaatggcagccaaaaagaaaaaattgattcagaagagtaagaagaaaaaa
gaaaaatcccagaagacgtcagtcaccagttcttaa
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