Hemitrygon akajei (red stingray): 140731729
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Entry
140731729 CDS
T11019
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140731729 (supt6h)
03036 Chromosome and associated proteins [BR:
haka03036
]
140731729 (supt6h)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140731729 (supt6h)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
140731729 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Spt6_S1
SPT6_acidic
Tex_central_region
S1
HHH_3
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
140731729
NCBI-ProteinID:
XP_072909557
LinkDB
All DBs
Position
8:complement(24372465..24444222)
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEESEEEYDEEGSVVQKKPKKFIEDDDEEEEEEDENADDQDEQGNLKDFIND
DVEEDDEEEEEEEDDDAGSERSGGSDAIIKKRKRKSYDDRLEDDDFDLIEENLGVKVKRQ
KFRRVKKVSDDEDEEEEETTKKGHEKEAIADELFPEFEGEEGEQAEAPVVAPEEEEEEEE
EESDIDDFIVDDDGQPLKKPKWKRKFSGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEL
EEEYEFEDEELGEGETRVRPKKTAKKRVSRRSIFEIYEPSELESSHLTDQDNEIRVTDMP
ERFQLRAIPVKSCEDEELEEESEWIYRNAFSTPTVSLQESSEYLERGQGISNFSRKGPAT
IQKIKEALNFMRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKENLTR
LFQKMQAYQYEQISADPDKPLADGVRALDTADIERLKDVQSTDELRDVYNHFLLYYGRDI
PKMQNALKPSKKKYKKNQQGGEDEEEGERDEEVEDDEHHGPELKQASRRDMYTICQNAGL
DGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGSRYMV
AMQIAREPLVKQVLRQTFQERAKINITPTKKGRKDIDEAHFAYSFKYVKNKPVKELRDDQ
FLKMCLAEDDNLLTVDICIDMKGLEGYGNEQTYFDEIKQFYYRDEFSHQVQEWNRQRSMA
IERALNQFLYPQMGKELKNKLLNEARDYICKCCSRKLYNWLKVAPYRPDQQNEEDDDDFM
EENQSKGVRVLGLAFASERDTPAFCSLVNGEGEVTDFLRLPYFLKRRNAWREEEREKKAH
DIETLKKFLLSKKPHVVAVGGENRDALMVVEDIKRIVNELEQEHQMSPIGVHLVDNELAV
LYMNSKKSENDFRDYPPLLRQAVSLARRVQDPLVEFAQVCGTDDDIVCLKFHPLQEQVIK
EELLNALYCEFINRVNEVGVDVNRAITHPHTQALVQYVCGLGPRKGSHLQKILKQNNTRL
ENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAV
DALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELS
CRYKDLRVPCRAPNSEEIFNMLTKETPETFYIGKLITCNVTGIAHRRPQGESYDQAIRND
ETGLWQCPFCQQDNFPELSEVWNHFDSGACPGQAIGVKTRLDNNVTGFIPTKFLSDKNVK
HPEERVKIGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHK
VEEDAKKKQQRTTYIKRVIVHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGANHLTVTW
KVTDGIYQHIDVREEGKENAFSLGQSLWINNEEFEDLDEITARYVQPMASFARDLLYHKY
YQDCNGGDRKKMEEILSKSKREKPSFIPYYISASKELPGKFLLGYQPRAKPRVEFVTVTP
EGYRYRGQVFPTVNGLFRWFKDHFQDPVPGITPSSTSRSSRTPASMDATPANINLADLTR
AVNALPQNMTTQMFNAIAAVTGQGQNPNATPAQWGSSQYGYGGSSAYHVFATPAQQPVAT
PLMTPSYSYTTPSQQPITTPQYHGSATPQTPATTRQRSQPKTSTAHTAVDWGKIAEQWLQ
EKEQERRKQKAKMTPRPSPSPMIEGTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagtgaagctgaggagtctgaggaagagtatgatgaagaagga
tcagttgtgcagaaaaagcccaagaagttcatagaagatgatgatgaagaagaggaggaa
gaagacgaaaatgctgatgatcaagatgagcaggggaatttgaaggacttcattaatgat
gatgtggaagaggatgatgaggaggaagaggaggaggaagacgatgatgcagggagtgaa
agatcaggaggttcagatgctatcattaagaaaaggaaacgcaaatcttacgatgacaga
ctggaagatgatgattttgacctaattgaggaaaacttgggtgtcaaagtcaaaaggcaa
aaattccgacgtgtgaaaaaagtatctgatgatgaagatgaagaggaagaagaaaccacc
aagaaaggacatgaaaaggaggctattgctgatgaacttttcccggagtttgaaggggaa
gaaggagagcaggcggaagcaccggtagtagcccctgaagaagaggaggaggaagaagag
gaagaatcagatatcgatgacttcattgttgatgatgatgggcaaccactcaagaaacca
aagtggaagagaaaattttcggggtacacagatgctgctcttcaagaagctcaggagatc
ttcggagtagattttgattacgatgaatttgaaaaatataatgaatatgatgaggagctg
gaggaggaatatgagtttgaagatgaggaattaggagaaggtgaaacaagagttcgccca
aagaaaaccgccaaaaagcgtgtaagccggcgtagcatctttgagatctatgaacccagt
gaactggagagcagccatctcacagaccaggacaacgagatcagagtcacagacatgcca
gaaagattccagcttcgtgcaattccagtcaagtcatgtgaagatgaagaacttgaggag
gagtctgagtggatttacagaaatgccttctcaacacccactgtttcattacaggagagt
tcagagtacctggaacgtgggcagggtatcagcaattttagccgaaaaggtcctgcaact
atccagaagataaaagaagcactcaattttatgagaaaccagcattttgaggtgcctttt
attgccttctacagaaaggagtatgtagagccagaactaaacatcaatgatctgtggaag
gtttggcagtgggatgagaagtggacacagctgaagactcgaaaagaaaaccttacccga
ctattccagaagatgcaagcataccagtatgaacaaatctctgctgatccagacaaaccc
ctggccgatggtgttagggcactggacactgcagatattgaaagattaaaggatgtgcag
tcaactgatgagctgcgagatgtgtataaccacttcttgttgtattatggtcgtgatatt
ccaaaaatgcaaaatgccttaaaaccaagtaagaagaaatacaaaaagaatcaacaaggt
ggagaggatgaggaggaaggagagcgtgatgaagaagttgaagatgatgaacatcacgga
ccagagcttaagcaggcttctcgcagagatatgtacaccatttgccagaatgctggtcta
gatgggcttgcaaagaaatttggtctgacccctgagcagtttggtgaaaatctaagagac
agttaccagcgtcatgagactgagcaatttccagcggaaccattggaactagcaaaagac
tatgtctgcagtcaatttccatcacctgaggctgtattagaaggttctcgatacatggtg
gccatgcagattgccagagaaccattggtcaaacaagttctaagacaaacttttcaagag
agagccaagattaatattactcccacaaagaaaggcagaaaggatattgatgaagctcac
ttcgcttattctttcaaatatgtaaagaataagcctgtcaaagaattaagagatgatcag
ttcttgaagatgtgccttgcagaggatgataacttattaactgtggatatctgcattgat
atgaaaggacttgagggatatggaaatgagcagacttattttgatgaaatcaagcaattt
tattaccgtgatgaattcagtcaccaagtgcaagagtggaatagacaacgcagcatggca
attgaacgagcgttgaatcagttcctgtacccacagatgggcaaggagctgaaaaacaaa
ctgctgaatgaggcacgagactacatctgcaagtgttgtagtcgcaaactttacaattgg
ttgaaggtcgcaccatatcgacctgaccaacaaaatgaagaggacgatgatgattttatg
gaggaaaatcagagtaaaggtgttcgagtgttgggcctggcatttgcaagtgaaagggat
acaccagccttctgttctcttgtcaatggagaaggggaagtaacagacttcctccgtttg
ccatatttcttaaaacgtaggaatgcttggcgagaggaagaacgagagaagaaggcacat
gacattgaaaccttgaagaagtttctattgagtaagaagcctcacgttgtggctgtcggt
ggagaaaatagagatgcacttatggttgtagaggacataaagcgaatagtgaatgaactg
gagcaggagcatcaaatgtcgcctattggagtgcatttagtagacaatgagctagctgtt
ctctacatgaacagcaaaaaatccgagaatgacttcagggattatccaccactattacgt
caggcagtatcgctcgctcgccgggtacaagatccacttgttgagtttgctcaagtttgt
gggacagatgatgacattgtttgtctcaaattccatcctttgcaggaacaagtaataaaa
gaagaattgctgaatgcactttactgtgaattcattaaccgagtgaatgaagtaggggtg
gatgtaaacagagcaataactcatccacatactcaagcgctagttcagtatgtttgtggt
ttaggacctcgtaaaggatcgcacctacagaagatcctcaaacagaataatactcgcttg
gaaaataggacgcagctagttacgatgtgtcatatgggtccaaaggtcttcatcaattgt
gcaggatttattaaaatagatactgcatcgttaggggacagcactgattcctacattgag
gttctggatggctccagagttcacccagaaacttacgagtgggccaggaaaatggctgtg
gatgctcttgaatatgatgaatcagcggaggatgccaacccagccggagcacttgaagaa
attttggaaaatcctgaacgactaaaggatcttgaccttgatgcgtttgcagaagaactg
gaaaggcagggctatggtaacaaaggtatcacattgtatgacattcgagctgaactgagc
tgcagatataaggatttgcgtgtaccatgccgtgcacccaactctgaggagattttcaac
atgcttacaaaagaaacgccagaaacattttatattggtaaattaataacgtgcaatgtc
acgggaattgctcacaggaggcctcagggtgagagttatgatcaggctatcaggaatgat
gaaactggtctttggcaatgtcctttctgccagcaggacaattttccagagcttagtgag
gtttggaatcattttgacagtggtgcgtgtcctggccaggctataggagtgaagacaagg
ctggacaacaatgttacaggttttattccaacaaagttcctcagtgataaaaatgttaaa
catcctgaagaaagggtcaagattggcatgactgtgcattgccgaataatgaaaatagac
attgaaaagtttagtgtggaccttacttgtcgaacatctgatctgatggataagaacaat
gagtggaagttacccaaggatacatattatgattttgactctgaggctgcagatcataaa
gttgaagaggatgcaaagaaaaagcaacaacgcacaacatacatcaagcgagtaatagtg
cacccatcattccacaatatcaacttcaagcaggctgagaagatgatggagactatggac
caaggagatgtcattatcagacccagcagcaaaggagcgaatcatctcactgtaacctgg
aaagtgacagatgggatctatcaacatatagatgtgagagaagaaggcaaggagaatgcc
ttcagtttgggacaatctctttggatcaacaatgaggaatttgaagatcttgatgaaatt
actgctcgatatgtgcagccgatggcatcttttgctcgtgacttgctctatcataaatat
taccaggattgcaatggtggagaccgtaagaaaatggaagagatcctatcaaaatccaaa
agggaaaagccttcttttattccctattacatttcagcatcaaaggaactgcctggaaag
tttttgttaggctaccaacctcgtgccaagccaagggtagagtttgtcacagtgacacca
gaaggatatcgatatagagggcaagttttcccaactgtgaatggtttatttagatggttt
aaggatcacttccaggacccagtgccaggtataacaccttcaagtacaagtaggtccagt
agaactcctgcctcgatggatgcaacaccagctaatattaatttggcagatcttacccga
gcagttaatgctctcccacagaacatgacaacgcagatgttcaatgcaatagctgctgtt
actggacagggtcagaatccaaatgccacaccagcacagtggggatccagtcagtatggc
tatggaggaagcagtgcctatcatgtttttgcaacccctgcacaacaaccagtagcaacg
ccattaatgactccaagctattcgtatacaacacccagtcagcaaccaattacaacgcca
cagtaccacggcagtgctactccacagactcctgccacaacccgacaaaggtcacagcca
aagacttcaactgcccatactgctgttgactggggcaaaatagcagagcagtggctacag
gagaaggaacaagagaggcgaaaacagaaagccaagatgactcctagaccttcacccagt
cccatgattgaaggcaccccaatgtctatcgctggtgatgccacaccattgctagatgaa
atggatcgatag
DBGET
integrated database retrieval system
