Hemitrygon akajei (red stingray): 140731795
Help
Entry
140731795 CDS
T11019
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140731795 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140731795 (rnf43)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140731795 (rnf43)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140731795 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
140731795
NCBI-ProteinID:
XP_072909699
LinkDB
All DBs
Position
8:36163080..36384816
Genome browser
AA seq
848 aa
AA seq
DB search
MRSAALLLAVQWLWSAALAATSQDSESVPSAETEAEIEVVQYQDGVVASNSTLRLQGHFA
GAGMREAAEGKLLQFHPLWLCNTSEDEQQDYGFVSMIKLERPDRDPHPCLSLFNKAKFAI
KRGATAVIFDVTDDARAVAQLKQNPEELLSRPVILIQGLDAAQLMNVINTNNEAVVRIHV
KNVEGRPAYDVGILMTLIVAFSVVVMILAVRIKCKQNQTRNSLQQQTINAISRLATRRYR
SRCRPLGHERQSSQDSQASSMSEPVCAICLEEFADGQDLRIISCFHEFHKECVDPWLLQH
RTCPLCMYNIIEGSSTIAQPEVHEQATPDAQVNQRIHLFRRYPGHAHLHRPTTAIPSRAP
HLNNPRTPGMQAPPSGHYIVTPEVYPVGFNTMRYVATRPRHPPALHRCTYRHGEGQGASY
RHQRPFVVRKGPPWLDRPHHGPFLHKPCRQQQLPICSAPLSSHKSNCTPLRSQLASSHDN
RSLSGDSFGINRSVCSGYLADSPGSDSSSGPCHYSSSDSTLDCTDISNRCIYGSQSTFRS
SLSSEYDPLVYCGASEESVKASSFEESRPRSVDSPSGPQDNQVLNHTHYHHHRHHHYSKP
HPRQKDEYCRNASQRQEGELLEDYVGDFQHCQRQADFPCQSQCSPHPAQCPCLEQGLLLP
PGLCLPEPSLQKVDTERDKSKVACAKPDPVPSEAKSNQSSKRRRRRRKSGFQAESPVVYF
HQDCDALEDYRVHVHYGNSGSPCHPPSIQTSVPIPLVLNSGASGEWHFPFCECPNPHCQQ
PLHHVHSESMLAGKPHVSNVDQGRPFQDGCCERHCDTEPVQDKSFYCQTFPDNTGTKSSV
EEICEEVV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgcagcgctgctgctggctgtgcagtggctgtggagcgcggcgctggcggcg
acgagccaggactcggagtcggtcccatcggcggagacagaggcagagatcgaggtggtt
cagtatcaggacggcgtggtggcgagcaacagcaccctccgcctccagggacatttcgcc
ggagccggcatgagagaggcggccgagggcaagctgctgcagtttcatcctctgtggctg
tgtaacaccagtgaagatgaacaacaagactatggctttgtcagtatgatcaaactggag
agacctgatcgagacccacatccttgtctctcgctcttcaacaaggccaaatttgctatt
aagagaggtgccaccgcagtgatcttcgatgtaactgatgatgcaagggctgtggctcag
ctaaaacagaatccagaagaactgttgtctcgtcctgttatcctgatccaaggcctggat
gctgcccagctgatgaatgtcatcaacaccaataatgaagcagtggtcaggattcatgtt
aagaatgttgagggtcggccagcctacgacgtgggaatcttaatgaccctgattgttgct
ttctcagttgttgtcatgatcctggcagtgagaatcaagtgcaagcagaatcaaacgcgg
aattccttgcagcagcagacgatcaacgcaatcagccggctggccacgcgccgttatcga
tcgcggtgccgccctctgggtcacgagcgtcagagcagccaggactcccaggccagcagc
atgtccgagcccgtgtgcgccatatgtctggaggagtttgccgatgggcaggatctacgg
atcatatcatgtttccatgaatttcacaaggaatgtgtggatccttggctgcttcaacat
cgcacctgccccctctgcatgtacaacatcattgaaggaagttcaactatcgcacagcca
gaggttcatgagcaagctacgcctgacgctcaagtaaaccagcgaatccacctgttccga
cgctatccaggccacgcccatcttcacagaccgaccactgccattccttccagagcacct
catctgaacaaccccagaaccccagggatgcaggctcccccctccggtcattacattgtt
acgccggaagtctaccccgtggggtttaacaccatgaggtacgtagccaccaggccacgg
catcctccggccctgcacaggtgcacctatcgtcacggcgaaggccagggagcgtcctac
cggcaccagagacccttcgtggtgcggaaaggtccgccctggctggacaggcctcaccat
ggaccgtttcttcataagccctgcaggcagcagcagcttccaatatgcagcgcaccactg
tcctctcacaagtccaactgtacccccttacgctcacagctcgccagcagccatgacaac
cgcagcctctcaggggacagctttggtatcaaccggtccgtgtgcagcgggtacctggca
gacagccccggcagcgactccagctcgggtccttgccactactcctcgagcgactccacg
ctggactgcactgacataagcaaccgctgcatttacgggagccagtcaactttccgcagc
tcactgagcagcgagtacgatccccttgtgtactgtggggcaagtgaagagagcgtaaag
gcttcatcctttgaggagtcgaggcccaggtcggtggactcgcccagtggtcctcaggac
aaccaggtacttaatcacacccactaccaccatcaccggcaccatcactacagcaaacct
cacccacgccagaaagatgagtattgcaggaacgcgtcacagagacaggaaggtgagctg
ctggaggactacgtgggcgacttccagcactgccagcgccaggcggactttccctgccag
tcccagtgcagcccgcaccctgcccagtgcccctgcttggagcagggtttgttgcttccc
ccaggactttgcctccccgagccctcgctgcaaaaagtggacacagagagggacaagagc
aaagtggcgtgcgccaaacccgacccagtgccttcagaagctaagtcgaaccagagcagc
aagaggaggaggaggaggaggaaaagcggcttccaggcggagtctcctgtagtttacttc
catcaggactgtgatgccctggaggactacagggtgcacgttcactatggcaacagtggg
agcccatgccaccctccaagcattcagacgtctgtgccaatccctttagttctcaacagt
ggagcctctggtgagtggcatttcccattctgtgagtgcccgaacccccactgtcagcag
ccactgcatcacgttcactctgagtccatgttggccggcaagccgcacgtcagcaacgtg
gatcaaggccgcccatttcaagatggctgttgcgaaagacactgtgatacagaaccagtt
caagacaagtccttctactgccagacattccccgacaacacaggtaccaaatcaagtgtg
gaagaaatttgtgaggaagtcgtgtaa
DBGET
integrated database retrieval system
