Hemitrygon akajei (red stingray): 140731823
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Entry
140731823 CDS
T11019
Symbol
nsun5
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140731823 (nsun5)
Enzymes [BR:
haka01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
140731823 (nsun5)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Other ribosome biogenesis factors
140731823 (nsun5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
140731823
NCBI-ProteinID:
XP_072909784
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All DBs
Position
8:complement(42210664..42233121)
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AA seq
481 aa
AA seq
DB search
MALYGKAAAVLRQAEEQRGSVKSLVYNSGYENIKQLYALVCETLRYTPVLEEIISTTDLL
KKEKKLQINIAKVLVYDLLFGKGLKCGGSWKVLIMKHRSQLKSALARLKVKRKVYRNEDL
IQSKHSDAKDCQLPRYVRVNLLKNNMEDVIDYFKREDYAYLGQATDAIDLKNLTHRQFIS
DPHLPELLVFHPKTDLHEHFLYTAGHIILQDKASCLPAHLLNPPVGSHVIDACAAPGNKT
SHLAAILCNKGKLFAFDLDTKRLATMGTLLLRAGVTCHEMANQDFLLVDSSNPKYRDVKY
ILLDPSCSGSGIVNRLNQFTDDEESSSAQRLQALAAFQHRALSHALSFPSVERVIYSTCS
VHREENEDVIEKILQHYASSFRLVNLMPSWPCRGLDTFPEGPRCLRATPGDTLTNGFFVA
MLEKHNGQSEMEQNRESFAEECAPPAASSLASVKVLEGNAAACSPTARHKKKKLKKVKSI
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtacgggaaggcggctgctgtgttgcggcaggccgaggagcagcgtggctct
gtcaaatctctggtgtataacagtgggtatgagaatattaagcagctgtatgccctggtg
tgtgaaacactgcgatacacccctgtgctggaagagatcattagcacgacagacctcttg
aagaaggagaaaaaactgcagatcaatattgctaaggtgcttgtgtatgatctcctcttt
gggaagggtctgaagtgtggcgggagttggaaggtattgattatgaaacatcgttcgcaa
ctaaaatcagcactggccagattaaaggtaaaaagaaaggtttaccgcaacgaggacctc
attcaatcaaaacattctgatgcaaaagattgccagctgcctcgttacgtccgagtgaat
ctgctgaaaaacaacatggaggatgtaattgactacttcaaacgcgaggattatgcttat
ctcgggcaggcaactgatgcaatagatctgaaaaatctcactcatagacaattcatctct
gaccctcatctccctgaattactcgttttccacccaaagaccgatcttcatgaacacttt
ttgtacacggctggacatattattctgcaagataaggccagttgtctcccggcccatctc
ttgaaccctccagtgggttctcatgtaattgatgcttgtgcagctcccggtaacaagacc
agccatcttgctgctattctttgcaataaagggaaactcttcgcgtttgatctggacacc
aagcgcttggctacgatgggcaccctgctgttgagggctggagttacgtgccatgaaatg
gccaaccaggacttcctgcttgtggattccagcaacccgaagtaccgggatgtaaagtat
attttactggatccttcatgcagtggctctggaattgtgaaccgcttaaaccagttcaca
gacgacgaggaatcgtcgtccgcacagcgcctgcaggcattggcggctttccagcacaga
gcactcagtcacgcactgagctttccaagtgtggagagagtcatttactctacttgttca
gtccatcgtgaggagaatgaagatgttatagagaagatactgcagcattatgcaagcagc
ttcagactagttaatttgatgccttcgtggccatgtcgtggtctggatacattcccagaa
ggtcccagatgtcttcgggccacgccgggtgacaccctgacaaatggcttctttgttgct
atgttggaaaagcacaatgggcaaagtgagatggagcaaaacagagagagctttgctgag
gagtgtgcgccacctgcagcatctagccttgcttctgtgaaggtattggaaggaaatgct
gcagcttgctcaccaacagctcgacacaaaaaaaagaaattgaagaaagtcaaatcaatt
gtatga
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