Hemitrygon akajei (red stingray): 140731838
Help
Entry
140731838 CDS
T11019
Name
(RefSeq) general transcription factor II-I-like isoform X1
KO
K03121
transcription initiation factor TFII-I
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140731838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140731838
03036 Chromosome and associated proteins [BR:
haka03036
]
140731838
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140731838
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
140731838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTF2I
CDC45
Motif
Other DBs
NCBI-GeneID:
140731838
NCBI-ProteinID:
XP_072909825
LinkDB
All DBs
Position
8:43239588..43400391
Genome browser
AA seq
1069 aa
AA seq
DB search
MAQVGTTPVIHEEPSSAENLLAVKFLMSALESMCQEIAKSKAEVACIAVYEKDIFVVGTE
RGRSFIGNRKDFQTDFVKYCVAEEQKVSQRLGGKAVRCVTPAAMDNQADIEKFRKLVEDL
FCLLYGKALGKPAPIPVPYEKIFKDPAALAIHGLPDGVCFKHPSKYDPITLKKILEQKSK
IIFTIKRPFLDTAIHHLETKRPTGKENAQMPPGGFVPVKVKTEPCDDNQPSTSIESIPIK
AEAEDPDYYRYSVQGPGVTTSDVIDTARPSHSKSFKGGELPNEANASSEETEEEFTADDS
TQQEHSETSEDPEVEVTIEDDEYFPPNKRPKNTVQATDAGATVKRKSREFNFEQWNARIT
DLRRQVEELFEKKYAEATLATGPVVIPYPLFQSNSEDLCVDGLPEGIPFRRPSTYGIPRL
ERILLAKDKIKFVIKRPELLTNEREETTPDKVVPGAKEEWNTRITKLRRMVEELFSKKYG
EAMGQTQAMIVPYRKFESHPKDLYVEGLPDNIPFRSPSWYGIPRLEKILQASNHIKFVIK
RADLLVNESNDTNIQRLSSTGKEDWNVRITKLRKQVEEIFNTKFGEALNLPQPVKVPYPL
FESNPQHLYVEGLPDGIPFRSPTWFGIPRLERIIRGSAKIKFIVKKPELVEPYLPDELKK
GKSTDGTPPTNRGRRRVSCPSEPNLTRPVKDSSSVPEKTAQVLTPSSPEIEVTLEASDET
PPVKTVGNNTQANGSNVASNTMFKPRGREFSFEQWNAKITELKQQVEALFNEKCGEALGV
SEPVRVPYALFESHPEDFYIEGLPDGVPFRRPSTFGIPRLEKILRAKAKIKFIIKKPDMF
QTALQEASKRPLTRSQTSSEEKIPEVKKAMPATLAPAVAGLANRAGGLPTAAGVEDLNII
QVTVPEGENEKVSKVEKARQLREQVNDLFSKKFGEAIGMNFPVKVPYRKITTNPGCVIVD
GMPPGVPFKAPSYLEISGMKKILESANFIKFTVIRPFPGLLINNQLAEQTVVETPAVSPG
AAAPASILPTASLVPPSTLVLPTAPPTAQEHDVNLREKSQPPESSNVKV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagttggaactacaccagttatacatgaagaaccctctagtgccgaaaatctt
ctggcagtaaaattccttatgtcagcactggaatctatgtgccaggaaattgcaaagtca
aaagctgaagtggcatgtattgctgtatatgagaaagacatatttgtggtggggactgaa
cgaggaagatctttcattggaaaccgaaaggattttcaaactgactttgtgaaatattgt
gtggctgaagagcaaaaggtatctcaaaggctaggaggtaaagctgtacgttgtgtgact
ccagctgctatggataaccaagctgacattgaaaaattcagaaaattagttgaagatttg
ttctgcttactttatggaaaagcgcttgggaaacctgctccaattcctgtgccttatgag
aagatctttaaggaccctgctgctttagcaatacacggattgcctgatggtgtatgtttt
aagcatccgtcaaaatatgaccctataacattgaaaaaaattctggagcaaaagtcaaaa
atcatatttacaattaaaaggccttttctggacactgccattcatcatttggaaacaaag
cgaccaactgggaaggagaacgcacagatgccccctgggggctttgttccagttaaggtg
aaaactgagccatgtgatgataaccaaccgagtacttcaattgaatcaattccaatcaaa
gctgaagcagaagatccagattattatcgatacagtgttcaagggccaggtgtgacgact
tcagatgttattgatactgcaagaccttcccattcaaagtcttttaaaggaggagagttg
ccaaatgaagccaatgcatcaagtgaagagactgaagaggagtttacggcagatgattca
actcagcaagagcattctgaaactagtgaggacccagaagtagaagttactattgaagat
gatgaatatttcccaccaaataagcgaccaaagaatactgtacaggcaacagatgctggg
gccacagtgaagcggaaaagtagggaattcaattttgagcagtggaatgctagaattact
gatttaagaaggcaagtggaagaactcttcgaaaagaaatacgctgaagcaactctagct
accggaccagttgtgatcccatatccactcttccagtccaattctgaagatctttgtgtt
gatggcttacctgaagggattccatttaggaggccgtccacctatggaattccaagatta
gaaagaattcttctagcaaaagacaagataaaatttgttataaaaagaccagaattgtta
actaatgagcgtgaagaaacaactccggacaaagtggttccaggagctaaagaagagtgg
aataccaggatcactaaactaaggaggatggttgaagaactctttagcaagaaatatggt
gaagccatggggcagacacaagcaatgattgttccctatcggaaatttgaatctcatcct
aaagacctttatgtggaaggtttacctgacaacattccattcagaagtccttcttggtat
ggaattccaaggctagagaagatcctgcaagcaagtaatcatattaagtttgttattaaa
agagcagacctactcgtgaatgagtcaaatgataccaatatacagagattaagctcaaca
ggaaaagaagattggaatgttaggattaccaaactcagaaaacaggttgaggagattttt
aatacaaaatttggtgaagctttgaatcttccacaaccagtaaaggtgccatatccatta
tttgaatccaatccacagcacctctatgttgaaggattaccagatggaattcctttcaga
agtcctacatggtttggaatacctagactggaaagaattattcgaggcagtgcaaagatt
aaattcattgtgaaaaagccagaactagtcgagccttaccttcctgatgagttaaaaaaa
ggaaaaagcactgatgggaccccacccaccaacagagggaggagacgtgtatcctgtcca
tctgagcccaatttgacccgacctgtgaaagactccagttctgtaccagagaagacagca
caagttctgactccaagcagcccagagatagaagttacgttagaagcttctgatgaaaca
ccaccagtcaagacagttggaaataacactcaagcaaatggttcaaatgttgcctcaaat
accatgttcaaaccaagaggcagggagttttcatttgaacagtggaatgccaaaattact
gagttgaaacaacaagtagaggcgcttttcaatgaaaaatgtggtgaagcattgggggtt
tcagagcctgtgagagtgccctatgcactatttgaatcacatcctgaggatttctatatt
gaaggtttgccagatggtgtgccttttagaaggccatcaacctttggaattcctagattg
gaaaagatactccgagcaaaggctaagatcaaatttataattaaaaaacctgatatgttt
cagactgcattacaggaagcctccaaacggcccctgacaaggtcgcaaacatcctctgag
gagaaaatacctgaagtgaaaaaggcaatgcctgctactttggctccagctgttgcaggt
ttagcaaatcgagctggtgggctaccgactgcagcaggtgttgaagaccttaacatcatt
caagttacagtccctgaaggtgaaaatgaaaaagtgtccaaggtggaaaaggctagacaa
ctgagagaacaagtaaatgacctgttcagcaagaaatttggtgaagcaattggaatgaat
tttccagtgaaggtcccttacagaaagataactacaaaccctggttgcgtaatagttgat
ggtatgcctccaggagttccatttaaagcacccagttatcttgaaataagtggcatgaaa
aagatcttggagtctgcaaacttcatcaaatttactgttataagaccttttccaggactc
ctgattaataatcagctagctgagcaaactgtagtagaaactccagcagtgtcacctgga
gcagcagcacctgcatccattttaccaactgcctcactggtacccccttcaacacttgtg
ctaccaactgcaccacctacagcacaagaacacgatgtcaatctgcgtgagaaatctcag
cctccagaatcatccaatgtgaaggtgtga
DBGET
integrated database retrieval system
