Hemitrygon akajei (red stingray): 140731862
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Entry
140731862 CDS
T11019
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140731862 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140731862 (taf15)
03019 Messenger RNA biogenesis [BR:
haka03019
]
140731862 (taf15)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140731862 (taf15)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140731862 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
140731862
NCBI-ProteinID:
XP_072909887
LinkDB
All DBs
Position
8:46036938..46070238
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AA seq
422 aa
AA seq
DB search
MSDYGNYNQPGAQAQSYGGYSGQSSQSYGHASQGYGGYEQSGGASGYGQGQSGYGSSCGQ
AQSGLNSGSSTSGYGQSGQGYGNEGSRNTYGQQQMYGSYGQHSDSPSSYGSKSETEYSSQ
SSQSSYSQSTSYHPPHEGYGQQRPRDDYEQDRPGRSKFGDDNRNFGRQQGRGRGGYSHSG
YENDRGERGRMGSGDRGGFNNFGDSRDHGQGPNPASDDNSDNNTIFVQGLGDNVTTEQVA
EFFKQIGVIKTNKKTGNAMINLYTDKVTGKLKGEATVSFDDPPSAKAAIDWFDGKDFHGN
IIKVSFATRRSEFVRGGRGGRGGGHMGRGHGRGFRGGGGGGGGPRGDDWTCPNLSCGNVN
FSWRNECNQCRTPRVDGGGGGEYRGRSGFRGRGGRGGDHGFGSGKMGGGRSDHRMDRRDR
PY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatggaaattacaatcagcctggagctcaagcacaaagctatggaggctac
agtggacagtcaagccaaagttatggacatgcctcacagggttatggtggctatgagcag
tctggtggtgcatctggatatggacaaggccaaagtgggtatggttcaagttgtggacaa
gcgcagtcaggattgaattcagggtcttcaacatcaggctatggacagagtggacaaggc
tatggaaatgaaggttctcgtaatacttatggacaacaacagatgtacggcagttatggc
cagcattctgattcccccagcagttatggctcaaaatcggaaacagagtatagttcccag
tcaagccaatcaagttacagccagtcgacctcctaccatccaccacatgagggctatggc
cagcagagaccacgagatgactacgagcaggatagacctgggaggagtaaatttggagat
gacaaccgaaactttggcaggcaacaaggtagaggtcgtggaggatacagccatagtgga
tatgaaaatgacagaggggaacgtggtagaatgggcagtggtgaccgtggtggcttcaat
aattttggtgactcaagagatcatggacaaggtcctaatcctgcctctgatgataactct
gataacaacaccatttttgtccagggcttgggagataatgtgacaactgaacaagttgct
gagttctttaaacaaattggtgtgattaagactaataagaaaactggaaatgccatgatc
aacctctataccgataaggtgacaggcaaactgaaaggtgaagcaacagtgtcttttgat
gacccgccatcagcaaaagcagcaattgattggtttgatgggaaggatttccatggaaac
ataataaaagtttcattcgcaacaaggcgatcagagttcgtgcgaggtggcagaggtggt
cgtggaggtggccatatgggtagaggacacggtcgtggttttcgtggtggtggtggtggt
ggtggtggtccgagaggtgatgattggacttgcccaaatctatcttgtggtaatgtcaat
ttctcatggagaaatgaatgcaaccagtgcagaacacccagagtggatggtggaggtggt
ggtgaatatcgtggcagaagtggattcaggggccgtgggggtagaggtggagatcatggt
ttcggttctggaaaaatgggtggaggaagaagtgatcacagaatggatcgacgcgacagg
ccttactga
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