Hemitrygon akajei (red stingray): 140731877
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Entry
140731877 CDS
T11019
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140731877 (rffl)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
140731877 (rffl)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
140731877 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
Prok-RING_4
HeH
zf-RING_2
zf-C3HC4_2
FYVE
SWI-SNF_Ssr4_C
DUF7573
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
140731877
NCBI-ProteinID:
XP_072909915
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All DBs
Position
8:complement(49078632..49127017)
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AA seq
355 aa
AA seq
DB search
MWASCCNWFCLDNQTMDEPEYNSRRQAYTNAGYNSQSSSPGLENTCRACGSQFENASRKH
VCVDCKKNFCTSCSIHSENSPKICHICQRFRTTDFHRGELMKLKVKELRDYLQLHEISME
MCREKSDLVDLVMGQNPQSVPTGQIHIPLYRMDIPEQQTFISNTHTATVASTSHDAPPPY
GAANPNNPRHSQEANLANAEVTADNQNETLAQAEENESDSEEVIVPGRHRASLSDLTCAE
DVEALSVRQLKEILARNFVNYKGCCEKWELMERVTRLFNDQKDLQNQALEFKSQDGGTGT
SALEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQFVIRAVHVFRS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcttcctgctgcaactggttttgtttggataatcaaacaatggatgaacctgag
tacaattctagaaggcaggcatacactaatgcaggctataactctcagtcgtcttcacct
ggattggaaaacacatgtcgagcttgtggctctcaatttgaaaatgcctcacggaagcat
gtatgtgtggattgtaagaagaatttttgtacgtcctgttcaatccactctgaaaatagc
ccaaaaatatgccatatttgccagcgatttcgtactaccgacttccaccggggagaactg
atgaaattgaaagtaaaagaattacgtgactacttacagctacatgaaatttcaatggag
atgtgccgagaaaaatcagatctcgtagacttggtcatgggacagaatcctcagtctgta
ccaactggtcagatacatattcctctttatagaatggatatacctgagcagcagaccttc
atttcaaacacgcacacagcaacagtggcttctacctcacatgatgctcccccaccatat
ggagcagccaacccaaataacccaagacattctcaggaagcaaacctggcgaatgcagaa
gtgactgcagacaatcagaatgagactttggcacaagctgaagagaatgagtccgattca
gaggaagtaattgtaccaggccgacacagagcctctttatcagacttgacttgtgccgaa
gatgttgaagctctctcagtgcgccagttaaaagaaatactggcacgaaactttgtaaat
tataaaggatgttgtgaaaaatgggagttaatggagagagtaacaagattgttcaatgac
caaaaagaccttcagaatcaggctttggaattcaaatctcaagatggtggcacagggaca
tcagctcttgaagaaaacctctgtaaaatatgcatggactctccaattgactgtgtgctg
cttgagtgtggccatatggtgacgtgtactaagtgtggaaagcgcatgaatgaatgccca
atttgtcgacagtttgtcatacgggctgtgcatgtcttcagatcttga
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