Hemitrygon akajei (red stingray): 140731911
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Entry
140731911 CDS
T11019
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140731911
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
140731911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Guanylate_cyc_2
Motif
Other DBs
NCBI-GeneID:
140731911
NCBI-ProteinID:
XP_072909987
LinkDB
All DBs
Position
8:complement(53843555..54568983)
Genome browser
AA seq
1567 aa
AA seq
DB search
MNSNPARSIASICLKMAANVGSMFQYWKKFDLQLLQRELDATATVLANRQDESEQSRKRL
IDESREFKKSTPEDLRKLVAPLLKSFQAEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPA
LDLGQQLQLKVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIKEYEQTLS
SRAEILALEKEQKLQNDFSEKERKLQETQTSLASKFEEADHKVQALQSALESTQTELFDL
KTKYDEESTAKADEIEMIMTDLERANQRAEVVQREAESLREQLSSANKSLQLATQIQKAP
DVEQAIEVLTRSSLEVELTAKDREIMQLVEDVQRLQANLTKLRETSANQVSQLEQQLTAK
NSTLKQLEEKLKEQSDYEEVKKELSILKSMEFVPAEGSGAQDASKTLEVLLLEKNRSLQS
ENATLRITNSDLSGSAGRNGKDRLESLRPSTSPTPPPSKLLRNTNEQASSANGTHQFSPT
VLGQDFYSSSLASSPVPLASAGKFALNSLLQRQLMQSFYSKAMQDAGSTTMLFPTGPYST
NSISSPSPIQPSADLNGMIPSPSQSESTGSISEGEELDTAEIARQVKEQLIKHNIGQRIF
GHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRGNI
TTRIRTPETGSDEAIKSILEQAKRELQVQKNVDSTQPPCTSSSGGSDEAIWSILEQARRE
MEAQKAGLEPTPKPTPVAQADLTLHSSKVAAAASSSSSSSSSSSTVSTSTSSSSSISSSL
TVMKKPSMMDSSNNATQTSHGLKKEPVHELCTSEHHGVAETPHNMLKQVKNELGRGSTWR
DQWWNTVCPDRRNPEDGRAEEINSGRDRFNNPSRLDRNSLQGPASSDHWKEWQNTESPYS
QASDLGTVVAGSSVTPQSSPLPSSPLIPVSKPLKPSIPPLTPEQYEIYMYQEVDTAELTR
QVKEKLAKNGICQRIFGEKVLRLTTPPSSSPATSNDYRGAFCTGATPVLGLSQGSVSDML
SRPKPWSKLTQKGREPFIRMQLWLNGELGQNVLPSQVQQPGQEITPKTSASCSPAPESPV
SSVESVKSVAELSSQHSIATESIKDIKSSEPCEHSSNDPQVLSSLPMSGQSALSIQKLVA
MSPELDTYAITKKVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREP
FVRMQLWLNDTSNVEKLMDMKRMEKKAYMKRRHSSVSDGHGSDSSVAGLDYSQSASPQQQ
IHLKKPRVVLAPEEKEALKRAYQLKPYPSPKTIEELAAQLNLKTSTVINWFHNYRSRIRR
ELFIEEVQAGSQGQTGSGGSPSVRGSRTGHSSEGESCDGGDLDVVAEEKENVMGVENYST
GRVSPQGGQVESLCDEDAESFVQVDLKDDKKELSQSEKDVMVSPNAESEDESTLKHPGRN
KRSQQEASSEEFRKSPSLVQSVVEEENSTSSASTSATVGETSRDLKEDTSSVQQASSEQS
TTCGGSSSSSAVGFQKRLFNFSDTASPAQKTSLRENSLRRKKAANLNNIIHRLEKAASRE
EPIEWEF
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgaactccaatccagctcgctctattgcctcaatatgtctcaagatggccgccaatgtg
ggatcgatgtttcaatattggaagaaatttgatttacaactgcttcagagagaacttgat
gctactgctacagtattggccaatcgacaggatgagagtgaacagtccagaaaaagactt
attgatgaaagtcgtgaatttaagaagagcacaccagaggacttgaggaagctggtagct
ccattactgaagagtttccaggcagagattgatgcactaagtaaaagaagcaaagaagca
gaggcagcctttctgaatgtttacaaaagattaattgatgttccagatcctgttccagca
ttggatctaggacagcaactccaactcaaagttcaacgtatgcatgacattgaaacagag
aatcagaagctccgcgaaacacttgaggaatacaataaagaatttgcagaagtcaagaac
caggaggttacaataaaggcacttaaagaaaaaatcaaagaatatgagcagactttgagt
agcagagcagaaatccttgcacttgaaaaagaacagaaattacaaaatgacttcagtgaa
aaagaaaggaaactacaggagactcagacatctttggcctcaaaatttgaggaagctgat
cataaagttcaggcattacagtcagccttggaatcaacacagactgaattattcgatttg
aaaaccaagtatgatgaagaatcaactgccaaagcagatgaaattgaaatgatcatgaca
gatctggaacgagccaatcagagggctgaagtggttcagagagaggcagagtccttacga
gagcagctttcctcagctaacaaatcccttcaactggccactcagattcagaaggctcct
gatgtggaacaagctattgaagtgttaacacgatcaagtctggaggttgaattaactgca
aaagaccgtgaaataatgcagttagttgaagacgtgcaacgactgcaggcgaatctgacg
aaacttcgtgagacctcagcaaatcaggtctcacaacttgagcagcaacttactgcaaag
aatagcacactcaagcaactggaggaaaagctaaaagaacagtctgactatgaagaggtt
aagaaggaactgagtatcttgaagtccatggaatttgtaccagcagagggatctggagca
caggatgcatccaagactctagaggtacttctgctggaaaagaaccgctcactacaatct
gaaaatgcaactctgcgtatcaccaatagtgaccttagcgggtcagctgggagaaatggg
aaagaccgacttgaaagtctgcgtccttcgacctcaccaactccccctccctcaaagttg
ctgcgcaacacgaatgagcaggcttccagtgctaatggtacgcaccaattttcaccgacg
gttttaggtcaagatttttacagttcatcattggcaagctccccggtccccctggcctct
gcagggaaatttgcactaaactcgcttcttcagcggcagctaatgcagtccttctactcc
aaggcaatgcaggatgcgggaagcacaaccatgctttttccaacaggtccttacagcaca
aactccatatcatccccaagccccatacaaccgagcgctgacttgaatggaatgatccct
tcacccagccagtcagagagtactggaagcatatccgagggcgaggagctggatacagcg
gaaattgcacggcaggttaaagagcagttgatcaagcacaatattggccaacggatattt
ggacattatgtactggggttgtctcaaggctctgtaagtgaaatattggccagaccgaaa
ccgtggaataagctgactgttcgagggaaggagccctttcacaagatgaagcaattcctg
tctgatgaacagaatattctggccttgcggagtatccagggcagacaaagaggcaacatc
acaacacggatcagaacccctgagacaggctctgatgaggccatcaaatcaattcttgaa
caagccaagagagaactacaggtgcaaaaaaatgttgattcaactcagccaccttgtaca
tctagcagtggtggttcagatgaagcaatatggtcaatactggaacaggcccggcgtgag
atggaagctcagaaggctggccttgagccgacaccgaagccaacacctgttgcgcaagct
gacttgacccttcattcatccaaagtagcagcagcagcatcatcatcatcatcatcatca
tcatcatcatcaacagtatcaacatcaacgtcgtcgtcatcatcaatctcttcctcatta
acagtcatgaaaaagccttccatgatggattccagtaacaatgcaacacagacttctcat
ggattaaaaaaggaaccagtacatgaattgtgcacctcggaacaccatggtgttgcagaa
acaccgcataatatgcttaagcaagttaaaaatgaattgggacgaggtagtacctggagg
gaccagtggtggaacacagtctgcccagacagaagaaatccagaagatggaagagctgag
gaaattaacagtggaagagataggtttaataatccaagcagacttgatcgaaactcattg
caagggcctgcttcatctgaccactggaaggaatggcaaaacactgaatccccttattct
caagcatctgatttaggcacagtggttgctggtagtagtgtgaccccacagagcagtcct
ctgccttcttcacctcttattcctgtttctaaaccacttaaaccttctataccaccacta
acaccagagcagtatgagatctacatgtaccaggaggtggacacagctgaactaacacga
caagtgaaggaaaagttggccaagaatgggatctgccagaggatcttcggggaaaaagtg
ttacgtctgaccacaccacccagctcctcaccggccacatcaaatgactaccgtggagca
ttctgcactggagcaacaccggttttgggcctttcacaaggaagtgtgagtgacatgctg
tcgcggcccaagccctggagcaagttgactcaaaaaggccgagaacccttcattcgtatg
caactgtggttaaatggtgaacttgggcagaatgttcttccatcccaggtccagcagccg
gggcaggagattaccccaaagacctctgccagttgcagcccagcccctgaatctccagtc
agctctgtggaatcagtgaagagtgtggctgaactatcatcccagcactcaatagccact
gagagcattaaggacatcaaatcctccgaaccatgtgaacactcctccaatgatcctcag
gttctctcatcgctgccaatgtctggccagtcagcattaagcatacagaagctggtagcc
atgtcacctgaactagatacgtatgctatcacaaagaaagtcaaggaagtgctaacagac
aataacttaggccaacgtctgtttggagagaccatccttggcctgacacaaggttctgtg
tctgatctcctggcacggcccaaaccctggcacaagctgagcctgaagggaagggagcct
tttgtccgtatgcagctctggctcaatgacacaagcaatgttgagaagttaatggacatg
aagcgaatggaaaagaaagcttacatgaagcgacgacacagttcagtgagcgatggtcat
gggagtgattcttcagttgctgggctagactacagtcagagtgccagtccccagcaacag
attcacctgaagaagcccagagtggtgttggccccagaggaaaaggaagctctgaagcga
gcataccagctaaagccatatccatctccaaaaactattgaggagcttgctgcccagcta
aatctgaaaacaagtactgtcatcaactggtttcataactacaggtcccgaattcgaagg
gagctgttcattgaggaagtacaggcagggtctcaaggtcagacaggatccggtggctct
ccatctgtcagaggaagtaggacaggtcacagttcagaaggggagagctgtgatggagga
gacttggatgtggtggctgaagaaaaggaaaatgtcatgggagtggaaaattatagcact
gggcgtgtgagccctcagggagggcaggtagagtcactttgtgatgaggatgcagagtct
tttgtgcaggttgaccttaaagatgacaaaaaggaattgtcccagtcagaaaaagatgtt
atggtatctccaaatgctgagagtgaagatgagagtaccctaaaacatccaggtcgaaac
aagagatctcaacaggaagcatcctcggaagagttccggaaaagtccgtctttagtgcag
tcagttgtagaagaggaaaactctacctcatcggcctccacatcagcaactgtaggggag
acctcccgagatttgaaagaagatacctcttcagtgcagcaggcgagcagtgagcagagc
accacctgtggaggctcctcatcctcttccgctgtaggctttcagaaacggctgttcaat
ttttctgacacagcatcacctgcccaaaaaacaagcttgagagagaacagcttaaggcgt
aagaaagcagcaaacttgaacaatattatccatcgtttggagaaggctgcaagtcgggaa
gagcccattgaatgggaattttga
DBGET
integrated database retrieval system
