Hemitrygon akajei (red stingray): 140732085
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Entry
140732085 CDS
T11019
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140732085 (vps50)
Membrane trafficking [BR:
haka04131
]
Protein recycling
Others
EARP complex
140732085 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
140732085
NCBI-ProteinID:
XP_072910333
LinkDB
All DBs
Position
8:complement(97034917..97238659)
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AA seq
967 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQENVPEIKSLVESFRIPSKEELRELRENPSDPLAEQEIINSIEE
IYFSNDSFDVVEHELEKLPSVLNLQDLEEYRDKLKQQQAVVSKKVADLILEKQAAYVKEL
ERVTSLQTNLQLAAVICTNARRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKT
LQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDV
ALSKTCKHFEVGHYTKVQLAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGN
SDTKFQKLQYKDLCTHITPDSYIPCLSDLCKALWEVMLSYYRTMSWHETHDNEESAPASD
GHGEITTDDPNFNRSYVKKKLEHGLSRIWQDVQLKAKTYLLGTDLSNFKYDDFILVLDII
SRLMQVGEEFCGSKSEVLQESIRKQSLNYFKSYHRIRLEELRMFLENETWELCPVKSNFS
ILQLHEFKFMRQSRSPSVSPSKQYSMSSSTAAAGSLFDQCQNGGNPFEQQTDSKDDETED
VLAANGYESDELEKSVYQDDDSDSDIPEELKRDFVDEQTGDVPLKSVSKETLKSRKKSDC
YLNKGNTLILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYTFFGRE
DMYESTGLGLISSRLRTTLSRIQESLIDLEAQPETSGSLTATEERKEKVPSPHLSHLVVL
NSTETLYGLAERVVATESLVFLADQFDCLQPHLDAMMPSAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLHLMATVKWDIKEIMSQHNVYVDTLLKEFEHFHKKLSEVSKQV
RIPFQVSNVLWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLIAAID
EPDRLKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaataaagtctcttatgtcccgtcagggcctgaaaagcccacaagaaaatgtg
ccagagatcaaatcccttgttgaaagttttcgaatccccagcaaggaagaactgagggag
ttgagagaaaatcccagtgaccctctagcagagcaagaaattatcaacagtattgaagaa
atatatttcagcaatgattcatttgatgttgtagagcatgaactggagaaactcccgtct
gttctcaaccttcaagatctagaagaatacagagataaactgaaacagcagcaagctgtt
gtatcaaagaaggtagcagatttaatcctggagaagcaggctgcgtatgtgaaggagctt
gaaagagttacatcactacaaactaatcttcaattggcagcagtcatatgtacaaatgcc
agaaggcagttaaatattgcgaaggaaggattcacacaagctagcttggggctactggct
aatcaaagaaaaaggcagctgctgattgggctgctgaagtctttgcgcacaattaaaaca
ctgcaaagaactgacgtacggttaagcgagatgttggaggaagaagattatcctggtgca
atacagctctgtttggaatgtcagaaagcagctagtacatttaaacactacagttgcata
agtgagctgaattcaaaattacaggatactttggaacaaattgaggagcagttagatgta
gctctgtcaaaaacctgcaagcactttgaagttggtcattatactaaggtccaacttgca
tatagactactgggaaaaacacagactgcaatggatcaactgcacatgcacttcactcag
gcaattcacaacacagtgttccaggttgttcttgggtatgtggagttgtgtgcagggaat
tctgacactaagtttcagaaactccaatataaagacctttgtacgcatattactccagac
agctacattccatgtctgtctgatctttgtaaagccctgtgggaggtcatgctgagttac
tatcggacaatgtcgtggcatgagacacatgacaatgaagagtctgctccagcttctgat
ggccatggtgagattacaactgatgatcctaactttaatcgaagctatgtaaagaagaaa
ttagaacatggcctttcacgcatttggcaggatgttcagttaaaggcaaagacctatttg
cttggaacagatttatccaacttcaagtatgatgattttattttggtactggacattatt
agcagattgatgcaagttggtgaagaattctgtggcagtaaatcagaagttttgcaggag
tctattcggaaacaaagtttgaattattttaaaagttatcacagaatacgtcttgaagaa
ttgcgtatgtttttagaaaatgaaacttgggaattgtgccctgttaagtctaacttcagt
attttgcaattgcacgagtttaaatttatgcggcagtctcgttctccgtcagtgtcacct
agcaagcagtattctatgtcgtcatctacagcagcagcagggtctctctttgaccaatgc
caaaatggtggaaatccatttgaacagcagactgacagcaaagatgatgaaacagaagat
gttcttgctgctaatgggtatgaatctgatgaattggagaagagtgtctatcaagatgat
gatagcgatagtgatattccagaagagcttaaaagggactttgtggatgagcaaactgga
gatgttccactgaaaagcgtttccaaagaaactttgaaaagtagaaagaagtccgattgc
tatctgaacaaaggcaatacactcattttaacaaacactaccttgaatgtaataagactt
gtcggaaaatacatgcagatgatgaatatattgaagccaattgcctttgatgtgatccac
tgtatgtcacaactatttgattattacctatatgcagtgtatactttctttgggcgggaa
gacatgtatgaatctacaggactaggattaatcagcagcaggctacgaaccacactgagt
agaatacaagaaagccttattgatctggaggcacaaccagaaacatcaggctccttgaca
gccacagaagagcgaaaagaaaaggttccaagcccacacctcagtcaccttgttgttcta
aattctactgaaacattgtatggtcttgcagaaagggtcgtggctacagagtctttggtg
tttctggctgatcaatttgattgtttgcaacctcatcttgatgccatgatgccttcagcc
aagaagccttttttgcagcagttctattcccagaccgtgtcaactgccagtgagctgcgc
aaaccgatctactggattgtggctgctaaagcaatcgattacgaacagatgttgcatctt
atggccactgtgaagtgggatataaaagaaattatgtcacagcacaatgtgtacgttgat
actcttctcaaggagtttgaacatttccataagaagttatctgaagtttctaaacaagtg
cgtataccattccaagtgtccaatgtcctttgggagcattgtatccggctggcaaacaga
actatagtggaaggttatgctaatgtgaaaaaatgcagtaatgagggaagggccttaatg
cagttggacttccagcagtttttaatgaagctagagaaactgactgacatcagaccaatt
cctgataaggagtttgtggaaacttatattaaagcctattatctaactgaaaatgatatg
gaaaggtggatcaaagaacatagggaatattcaacgaagcagttaacgaaccttgtgaat
gtatgtctgggctcgcatatcaataaaaaagcacggcagaaactgatagccgccatcgat
gaaccggatagacttaagagatag
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