Hemitrygon akajei (red stingray): 140732322
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Entry
140732322 CDS
T11019
Name
(RefSeq) integrin beta-1-A-like isoform X1
KO
K05719
integrin beta 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03271
Virion - Rotavirus
haka04145
Phagocytosis
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
haka04514
Cell adhesion molecule (CAM) interaction
haka04517
IgSF CAM signaling
haka04518
Integrin signaling
haka04530
Tight junction
haka04810
Regulation of actin cytoskeleton
haka04820
Cytoskeleton in muscle cells
haka05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
140732322
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140732322
04514 Cell adhesion molecule (CAM) interaction
140732322
04517 IgSF CAM signaling
140732322
04518 Integrin signaling
140732322
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
140732322
09144 Cellular community - eukaryotes
04510 Focal adhesion
140732322
04530 Tight junction
140732322
09142 Cell motility
04820 Cytoskeleton in muscle cells
140732322
04810 Regulation of actin cytoskeleton
140732322
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140732322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140732322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140732322
04515 Cell adhesion molecules [BR:
haka04515
]
140732322
04090 CD molecules [BR:
haka04090
]
140732322
Membrane trafficking [BR:
haka04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
140732322
Exosome [BR:
haka04147
]
Exosomal proteins
Proteins found in most exosomes
140732322
Cell adhesion molecules [BR:
haka04515
]
Integrins
Integrin beta subunits
140732322
CD molecules [BR:
haka04090
]
Proteins
140732322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
DUF8203
Motif
Other DBs
NCBI-GeneID:
140732322
NCBI-ProteinID:
XP_072910894
LinkDB
All DBs
Position
8:complement(142853887..142932704)
Genome browser
AA seq
801 aa
AA seq
DB search
MDLKCILHTLLICCCCWNGLAQSDHSECLKASAKSCGECIQAGRNCGWCTKVDFLQEGEP
NSARCDDINSLISRGCSKSEIENPKGSQQIDANKELTGRTSGTKVEVKDITQIRPQKLTL
KLRSGEPQTFSLYFKRADDYPIDLYYLMDLSFSMKDDLEKVKKLGTELKNEMQKITSDFK
IGFGSFVDKTVMPYISTTPAKRKNPCPGGEVCTSPFSFKNVLPLTEDGSKFNELVSNQTV
SGNLDSPEGGFDAIMQVAVCGDEIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLNTEGLYTMSDYYDYPSIAHLVQKLSENNIQPIFAVTDDFKGVYEELHNLIPKSEVGVL
SSNSSNVIKLILDAYHALSSEIILENDKLPEGLSLQYTAFCKNNTVHTGEKGRKCLGIQI
DDEVSFNISITATKCPNNGKKTSFQIKPLGFNEKVEINLEFICECECHKKGLPNSAECHQ
GNGTFECGACRCNKGRIGRYCECSTDEVNSEDMDASCRKDNTSQICSDNGDCICGECLCK
KREITTEIISGKYCECDNFNCDRSGGLICGGNGICKCRVCECYPNFTGNACDCSLDNSTC
ISKNGQMCNGRGTCECGRCKCTDPKFQGSACEMCPTCPGVCTEHKDCVQCKAFQKGPKKD
TCDQCEFEIILVEKQDELPQPGTVPSIAHCKEKDENDCWFYFSYSVNDQNVPEVHVTKNP
ECPQAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENP
IYRSPIHKFKNPNYGRKVASL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatgtatcctacatactttactgatttgctgctgctgctggaatggactt
gcgcaatcagaccacagtgagtgtttaaaagccagtgcaaagtcatgtggagaatgtata
caagctggtagaaactgtggatggtgcaccaaagttgatttcttacaagagggggaacca
aactctgcacgctgtgatgatattaactctttaataagtagaggatgttcgaagagcgag
attgaaaatcccaaaggttcacaacaaatagatgcaaataaagaacttactggtcgcaca
agcggtacaaaggtagaggtgaaagacattacacagattcgaccacagaagttaactctg
aaattgcgatcaggagagccccagaccttctcgttgtattttaaaagagcagatgattat
cctattgatctctattatcttatggacctgtctttttccatgaaggatgacttggaaaag
gttaaaaagttaggaacagaattgaaaaatgaaatgcaaaagataacttctgatttcaaa
attgggtttgggtcctttgtggataagactgtgatgccatatattagcacaaccccagcc
aaacgaaaaaatccttgcccaggtggtgaggtatgcacaagtccatttagcttcaaaaat
gtgctaccattgacagaagatggatcaaagttcaacgaacttgtaagcaaccagactgtt
tctggaaatctagactctccagaaggtggttttgatgccattatgcaggttgctgtttgt
ggggacgagattggttggcgaaatgtcactcgattgctggtattttctacagatgcagga
tttcactttgctggagatggtaaactgggtggcattgttctaccaaatgatgggaaatgt
catctcaatactgaaggtctctacaccatgagtgattactatgattatccatccattgct
catttggtacagaaacttagtgaaaataatattcagcctatttttgctgttacagacgat
ttcaagggggtatatgaggaactccataatctcattccaaaatctgaagtgggtgttctt
tcatcaaactccagtaatgttatcaagttgatccttgatgcttatcacgctttgtcttct
gaaattatcctggagaatgataaattgccagaagggctttcattgcaatatacagccttc
tgcaagaataatactgttcatacaggggagaaaggcaggaagtgtttgggcattcaaatt
gatgatgaggtcagcttcaacataagtatcacagcaacaaaatgtccaaataatggtaaa
aaaacaagttttcaaatcaaacctctgggatttaatgagaaagtagagattaatctggaa
tttatttgtgaatgtgaatgtcataaaaagggattgccaaatagcgcagaatgtcatcag
ggtaatggaacttttgaatgcggagcctgcaggtgtaataaagggcgcattggacgttac
tgtgagtgcagcactgatgaagtaaacagtgaggacatggatgcttcatgcaggaaagat
aacacatctcaaatctgtagtgacaatggtgattgcatctgtggagaatgcctctgtaaa
aagagggaaattactactgaaatcatctctggcaaatattgtgaatgtgataacttcaac
tgtgaccggtctggtggtttgatttgtggaggaaatggaatctgtaagtgtagggtatgt
gaatgttaccccaacttcactggcaatgcctgtgattgctctctggacaattcaacatgt
atttcaaagaatggacaaatgtgtaatggcagaggtacatgtgaatgtggtcgctgcaaa
tgcactgatccaaaattccaggggtcggcctgtgaaatgtgtccaacttgcccgggagtc
tgtacagaacacaaggattgtgttcagtgtaaagccttccagaaaggacccaagaaagat
acctgtgatcagtgtgagtttgaaattattttggtggaaaagcaggatgagttgccacaa
ccaggaacagttccatcaattgctcactgtaaagagaaggatgagaatgactgctggttc
tacttctcctattctgttaatgaccagaatgttccagaagttcatgttaccaaaaatcca
gaatgtccgcaagcacccgacatcattccaattgtagctggagtggttgctggtattgtc
ttgataggccttgccttgctgctgatttggaaattactgatgatcattcatgaccgaagg
gaatttgcaaaatttgagaaagagaaaatgaatgccaagtgggatacacaagaaaatcct
atttacaggagtcctatacacaaattcaagaatccaaattatgggcgcaaagttgcttct
ctctaa
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