Hemitrygon akajei (red stingray): 140732323
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Entry
140732323 CDS
T11019
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03271
Virion - Rotavirus
haka04145
Phagosome
haka04510
Focal adhesion
haka04512
ECM-receptor interaction
haka04514
Cell adhesion molecule (CAM) interaction
haka04517
IgSF CAM signaling
haka04518
Integrin signaling
haka04530
Tight junction
haka04810
Regulation of actin cytoskeleton
haka04820
Cytoskeleton in muscle cells
haka05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
140732323
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140732323
04514 Cell adhesion molecule (CAM) interaction
140732323
04517 IgSF CAM signaling
140732323
04518 Integrin signaling
140732323
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140732323
09144 Cellular community - eukaryotes
04510 Focal adhesion
140732323
04530 Tight junction
140732323
09142 Cell motility
04820 Cytoskeleton in muscle cells
140732323
04810 Regulation of actin cytoskeleton
140732323
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140732323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140732323
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140732323
04515 Cell adhesion molecules [BR:
haka04515
]
140732323
04090 CD molecules [BR:
haka04090
]
140732323
Membrane trafficking [BR:
haka04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
140732323
Exosome [BR:
haka04147
]
Exosomal proteins
Proteins found in most exosomes
140732323
Cell adhesion molecules [BR:
haka04515
]
Integrins
Integrin beta subunits
140732323
CD molecules [BR:
haka04090
]
Proteins
140732323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
140732323
NCBI-ProteinID:
XP_072910897
LinkDB
All DBs
Position
8:142978087..143067159
Genome browser
AA seq
709 aa
AA seq
DB search
MDVLLSGHPFWMELNKESSLMDLKLYISTMLICFWMWQDLAYSDGSECLRAKALTCGQCI
QSGKNCGWCTKDDFLQPGELTMARCDDIEALKRRGCTMEYIENPKGSLRVNTNKSLTGHV
NGVKKLEDITQVQPQSLILKLRSGEPQTFSLHFKRAEDYPIDLYFLADLSLSSENDLENM
KTLGIKLKKEIRKITSDLRIGFGTIVKTPCPAGTTCTGQSSFKNILPLTNNRAEYSKLVR
SQTIAAGQKSSAGGVDAIMQVAVCGDNIGWRTATRLLVFYSNEELHFAGNKKHGRLLPSA
RNCHLDTQGVYVISRHQNYSSIAQLAQKLNDNKIQLLFAVKEELKDAYKALQVHIPKSEV
GNQTAIELIKAYHALSSKVILDNSKLPKGVSIRYTAYCKNNITQTGQHGRKCSGIEVGEE
VRFTVSIITEKCPNDGQPTTIEIKPLGFNENVEIKLQFQCECECQIHGIANSPECNQGNG
ILECGACRCNKGYIGRFCECSIDEVLSEDFDVSCRKDSTSIICSGKGDCICGACVCRKRD
NPHESVFGRYCECDNFSCDWSGGLICGGHGICTCGTCQCFPSFTGSACDCSLNTSSCVSA
NGMLCNGRGICECGRCKCTDSKYAGPTCEACPTCEGVCTIHKHCVQCKAFNHGPKKDSCD
QCGFEVTMVEDMNQLLEQQCAFMDVDNRRFYFSYVINDQNVPVVHVLKP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcttctcagtggacaccctttctggatggaattgaacaaagagtcttctttg
atggatttgaagctttacataagtacaatgctgatttgtttctggatgtggcaagatctt
gcttattcagatggtagtgaatgtttaagagccaaagcactgacttgtggacaatgtata
caaagtggaaaaaattgtggatggtgcacaaaagatgatttcttgcagccaggagagttg
acaatggcacgctgtgatgatatagaagcgctaaaaaggagaggatgtacgatggaatat
attgaaaatcccaaaggttcattgagagtaaataccaataaaagcctaactggccatgta
aatggtgtgaagaagctggaagacatcacacaagttcaaccacagagtctaatcctaaaa
ttacgatcaggagaaccacaaaccttctcattgcattttaagagagctgaagattatccc
attgacttatattttcttgcggacctctccctttcttcggagaatgatttggaaaacatg
aagacattgggaattaaactgaagaaggaaataaggaagataacttctgatctcagaatt
gggtttggcacaatagtgaaaactccttgcccagctggtacaacatgtacaggtcaatcc
agcttcaaaaacattctgccattaactaacaatagggcagagtacagcaaacttgttcgg
agccagaccattgcagcaggtcagaaatcttcagcagggggtgttgatgcaatcatgcag
gttgctgtctgtggggataatattggttggcgaactgccactcgactacttgtcttctat
agtaatgaagaacttcactttgctgggaataagaaacatggcagactgttgccaagtgct
aggaactgtcaccttgacactcagggtgtctacgtaatcagtcgccatcagaattattca
tccattgctcaattggcacagaaacttaatgacaataagatacagcttctctttgctgtt
aaggaagaacttaaagatgcttacaaggcactccaagttcacattccaaagtccgaagtt
ggaaatcaaacggcaatcgagttaatcaaagcctatcacgccttgtcatctaaggttatc
ctggataacagcaaattacctaaaggagtttcgatacgttatacagcctattgcaagaat
aatatcactcaaacaggacaacatgggagaaagtgttctggtattgaagttggtgaagag
gtgagattcactgtaagtattataacagaaaagtgcccaaacgatgggcagccaacaact
attgaaattaaaccactgggatttaatgagaatgttgaaattaaactgcagttccagtgt
gaatgtgaatgccaaatacatggaatcgctaatagtcctgaatgtaaccagggcaatgga
attcttgagtgtggagcctgtagatgtaataaaggttatattggacgattttgtgaatgc
agcattgatgaagtattgagcgaggactttgatgtttcatgtagaaaagatagtacatct
ataatctgcagtggcaaaggagattgtatctgtggagcatgtgtctgcagaaagagagac
aatcctcatgaatccgtcttcggccgatattgtgaatgtgataatttcagttgtgattgg
tctggtggtttgatttgtggaggacatggcatttgtacatgtggaacatgtcaatgcttt
cccagtttcacaggcagtgcctgtgattgttcattgaacacatcatcatgtgtttcagcc
aatggaatgttatgcaatggcagaggaatttgtgaatgtggccgatgcaaatgcacagac
tccaagtatgcagggccaacctgtgaagcttgtccaacctgtgaaggtgtctgtactatt
cataagcattgcgttcaatgtaaagcctttaaccatggaccaaagaaagacagctgtgat
cagtgtgggtttgaagtaaccatggtggaagacatgaatcagttgttagaacagcagtgt
gcatttatggatgtggacaacagaaggttctacttttcatatgtcattaacgaccagaat
gttccagtggtacatgtattaaaaccctag
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