Hemitrygon akajei (red stingray): 140732326
Help
Entry
140732326 CDS
T11019
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04144
Endocytosis
haka04517
IgSF CAM signaling
haka04520
Adherens junction
haka04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140732326
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140732326
09144 Cellular community - eukaryotes
04520 Adherens junction
140732326
04530 Tight junction
140732326
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
haka01009
]
140732326
Protein phosphatases and associated proteins [BR:
haka01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140732326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
140732326
NCBI-ProteinID:
XP_072910917
LinkDB
All DBs
Position
8:complement(143708505..144547462)
Genome browser
AA seq
1379 aa
AA seq
DB search
MKVTVCFARTRVVVPCGDGAITVHSLIQQAVTRYRRAIAKDPGYWVQVHRLEHSDGGILD
LDDILSDVADDKDRLVAIFEEQDPHHGGDGTSASSTGTQSPDMFSSESTPNSLSAFQPYQ
VSSEIEVTPSVLRANMPLHVRRSSDPALVGLLSPVSGPNLNSAEPSRKNPTRWSTTPGFP
KPSQTSSSLDRKKKEPTPRNPVNGQDNYRSLPRDAGHWSNQFQRDNARSSLSATHPMVDK
WLERQEQEDEGTEDENNRAEPVIRADSCLEHGQSFSLSDVLKLVEVSNDGGPLGIHVVPF
SSTGGRTLGLLVKRLEKGGKAEREKLFNENDCIVKINGGDLRNIRFEQAQHMFRQAMRSH
VIWFHVVPAANKEQYEQVPLGDKNVSYSNRINMDTQGNDRKSAINSSLDETPQRLSRTTN
EADQTASYSHLPHNQHSASKPPTGQNLTPQRISSTPTTSFSTKKIGKKLNIQLKKGPEGL
GFSITSRDVPVGGSAPIYVKNILPKGAAIQDGRLKAGDRLLEVNGVDLTGKIQEEVVTLL
RNTKMGGSVNLLVLRQEETFLPRELKKESSQMQGPSDLKAEDDDLVLTPDGTREFLTFEI
PLNDTGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAASKDGRLNVNDQLIAVNSESLL
GKTNQDAMETLRRSMSTEGNKRGMIQLIVARRITKHNELETPGSPPGPELPIDAVMEDRE
RRISHSLYSGIEGLGESPTRNIAYNRLMGNCQMSPTVNMTQDDIVIIEDDRPPGNLPRLS
NQSSMGYHQEMNFVTSGLWVKEPDKDKTDGALNSDVDPAIAFQREGFGRQSMSEKRTKQF
GDANQLDFVKTRKSKSMDLVADETNLDSLAEQITPGSSTRDVGPSLGLKKSSSLESLQTA
VAEVTLNSDIPFHRPRPRIIRGRGCNESFRAAIDKSYDKPAEDDDDDEGMETLEEDTEES
SRSGRESVSTASDQPSLASGQQLGTVEKQVNGSKAKEDRKKEKSGKEREKKKDKEKEKEK
DKEKNKPKKGMLKGLGDMFRFGKYRKEEKIGKLDRKGSNKGKLEETPSSEDERIRMRQEQ
ERIQEKHREIRERQARERDYADPQDLSRTYGSEDDPTYAGMSWYESSADIGRHLVLNTRP
QSAREETQPMEAVYAQVNKPRNGKIPTSESNRLAPSNHDRIQKLRNEFQQAKQEELEDRR
RTYSFEQPWPSSGPYAQSGRHSVSVEVQLQRQRQEERESFQQAQRQYSSLPRQSKKNSSS
LTPEAWDKSYTPGEGFQSAKDNPRYSSYQGSRNGYLGHGVNARVLMETQELLRQEEQRQK
DQLIANKPVEGRNNYDSYKPDPAYSLPKGPYRQDVPPSPSQVARLSRLQMQDQGRPFYP
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaccgtctgcttcgcgagaaccagggtggttgtcccttgcggagatggagcc
atcaccgtgcacagcctcatccagcaagccgtcaccaggtatcgccgagccatcgccaag
gatccaggttactgggtacaagtacatcgcctggagcacagtgatggtggcattttggat
cttgatgacatcctctctgatgttgctgatgataaggaccgacttgttgccatctttgaa
gagcaagacccccaccatggtggtgatggaaccagtgctagttcaacaggcactcaaagc
ccggatatgttcagcagtgaatcgacacccaactccttgtctgcatttcaaccctatcaa
gtatcaagtgagatcgaggtcacaccatctgtcctccgagcaaatatgccactccatgtg
cgacgtagcagcgaccctgctctcgttggtcttctgtccccggtatcaggacctaatctc
aactctgcagaaccatctcgcaaaaaccctactcgttggtcaacaacaccaggctttcca
aagccaagccagacatcaagtagccttgatagaaaaaagaaggagccaactccgagaaat
ccagtaaatgggcaggacaattacaggagtttgccaagagatgcaggccattggtcaaat
cagtttcaacgggacaatgcccgatcatctttaagtgccactcaccctatggtcgacaaa
tggctggaacggcaggagcaggaggatgaagggacagaagacgagaacaacagggctgag
ccagttattcgtgctgattcgtgccttgagcatggacagagtttttcgcttagtgacgtg
ctaaagctggttgaagtctccaatgatggagggcctttgggaatccatgtagtgcctttc
agttccacaggtggaaggaccctagggttactcgtgaaacgtttggagaaaggtggtaaa
gccgagcgggaaaaactgttcaatgagaatgactgcatcgtcaaaataaatggtggtgat
ttgcggaatatacggtttgaacaagcgcaacatatgtttcgccaagccatgcgttcacat
gttatttggttccacgtggtccctgcagcaaataaagagcagtatgaacaagttcctttg
ggtgataaaaatgtcagctattccaatcgaatcaatatggatactcagggcaatgatcga
aagagtgctattaactcaagtcttgatgaaacaccccagagattgtctcgaacaacaaat
gaggcagatcagactgcttcttactctcacctacctcacaatcagcattcagcatcaaaa
cctccgacaggccagaacctgacaccccaaagaattagttctacacctaccacaagcttt
agcaccaaaaaaattgggaagaaactcaatattcagctgaagaaaggtcctgaaggtctt
gggtttagcatcacatcacgagatgtccccgtcggtggttcagcaccgatttatgtgaaa
aatatccttccaaaaggtgcagccatccaagatggcaggttgaaggcaggagaccgcctt
ctagaggtaaatggtgttgatttaacgggaaaaatacaagaggaagtggtgaccctgctg
aggaatacgaagatgggtggtagtgtcaatctactagtcctccggcaagaagaaaccttc
ctccctcgagagctgaaaaaagaatcaagtcagatgcagggaccaagtgacttgaaagca
gaggatgatgacttggttcttacacctgatggcactagggagttcctgacttttgaaatt
cctctcaatgacaccggatctgcaggccttggggttagtgtcaaaggaaataggtcaaaa
gagaatcatgctgacctgggcatatttgtgaagtctatcatcaatggaggagcagcatct
aaggatggaaggcttaacgtgaatgaccagcttattgcagtaaacagtgaatcgttgttg
ggaaagacgaatcaagatgccatggaaacactccgaagatctatgtcaacagagggaaat
aaaagggggatgatccagttgattgttgccaggaggataacaaaacataatgagctcgag
acacctgggagtccccctgggcctgagttgccaattgatgccgtgatggaagacagggag
cgaaggatttcacattcactttacagtggaatcgaggggctgggtgagtcgcccaccagg
aatattgcatataacagattgatgggtaactgccaaatgtccccaacagtgaacatgacc
caagatgacatagttattatcgaggatgacagaccacctggcaatcttcctcgactgtct
aatcagtcatctatgggataccatcaagaaatgaattttgtcacttctggtctttgggtg
aaagaacctgataaagataaaacagatggtgctttaaattcagatgtcgatcctgccatt
gcctttcagcgagagggatttggacgtcagagcatgtctgaaaaacgtactaagcagttt
ggagatgccaatcagctggactttgttaaaacacggaaatctaaaagcatggatttagta
gctgatgagactaatcttgattccttggctgagcagataaccccaggctcgtcgaccagg
gatgttgggccttcattagggctgaagaaatcaagctcattagaaagtctgcagacagca
gttgctgaggtaactttgaacagtgatattcctttccatcgtccacgaccacgcatcatc
cgaggaagaggttgcaatgaaagtttccgggctgccattgacaagtcatatgataaacca
gcagaagatgatgatgacgatgaaggaatggaaacattggaggaagacactgaagagagt
tctagatcaggtagagagtctgtatcaacagcaagtgaccaaccgtctttggccagtggg
caacagttgggcacagtggagaaacaggtcaatggttcaaaagccaaagaggacagaaag
aaagaaaagtctggaaaagaaagagaaaagaagaaagacaaagagaaagagaaggaaaag
gacaaagagaagaataaaccaaagaaagggatgttgaaaggtcttggagatatgttcaga
tttgggaaataccggaaagaagaaaaaattggaaagcttgatcgtaaagggtcaaacaag
ggcaagctggaagaaactccttcatctgaagatgagcggatacgaatgaggcaggagcaa
gagagaatccaggaaaaacaccgggaaattcgggaacggcaggcccgcgaacgagactat
gctgatccacaagatttgagcagaacctatggatctgaggatgacccaacatatgctggc
atgagttggtatgaatcttctgcagacatcggacgtcatctagttttaaacaccagacca
cagagtgcaagggaggaaacacaaccaatggaagcagtctatgcccaagtgaataaacca
agaaatgggaaaattccaactagtgaaagtaacagactggctcctagtaatcatgatcgg
atacagaagctaagaaatgaatttcagcaagcaaagcaagaggaactcgaggacaggaga
cgaacatacagttttgaacagccttggcccagctctggcccttatgctcaaagtggtcga
cactctgtgtctgtggaagtccagcttcagcgccagagacaggaagaaagggagagcttt
cagcaggctcagcggcagtacagctcgttgccgaggcaaagcaaaaagaattccagttcc
ttgactccagaagcatgggataaaagttacaccccaggtgaagggtttcagagtgcaaag
gacaatcccaggtattccagttatcagggttctcggaatggctacctaggacatggagtc
aatgcacgggttttgatggagacacaggaactgctgcggcaagaggaacagcgacaaaag
gatcagttgattgcaaacaagcctgtagaaggacgtaataattacgactcttacaaaccc
gatccagcctacagccttccaaaaggtccttacaggcaagatgttcctccgtccccttct
caggtagccagactgtcccggttacaaatgcaggaccaaggtcggccattctatccataa
DBGET
integrated database retrieval system
