Hemitrygon akajei (red stingray): 140732462
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Entry
140732462 CDS
T11019
Symbol
bop1
Name
(RefSeq) ribosome biogenesis protein bop1
KO
K14824
ribosome biogenesis protein ERB1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140732462 (bop1)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
140732462 (bop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
140732462
NCBI-ProteinID:
XP_072911248
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All DBs
Position
8:complement(174784200..175022884)
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AA seq
752 aa
AA seq
DB search
MAAESMSVAGRSGGKSGGNKRSAPALEPEEQLPIFESSAVDEDAGDLSDSEESMFSGLED
SGSDSSDEEDDREGDESDEDSDSGVEENSVKKDIKVRKEEGESCGNLVESDSTLRPEQSG
LTPPVDEYKEDSSDEEDIRNTVGNIPMEWYKDYPHIGYDLDGKKIYKPIRNKDELDEFLD
KMENPDYWRTVPDKMTGTDIRLTDEQIDLVHRIQKGQFGDAKFDPHQPSIDFFTHETMIH
PVTNHPAHKRSFVPSLIEKEKVSKLVHAIKMGWIKPRKPRDDTPRYYDLWAKEDPNAILG
RHKMHVPAPKLKLPGHEESYNPPPEYLLTEEERLAWEQQEPEERKLNFLPQKFPSLRAVP
AFSRFIHERFERCLDLYLCPRQRKMRVNVDPDDLIPKLPKPKDLQPFPTTQALVYTGHTN
LVRCISVSPSGQWLASGSDDYTVRFWEVATARCLKTIEVEGAVKSIAWNPNPVHCLVALA
VEHSVIIINPCLGDKLLYNTTDQLIASFEKPDEEPPQPVEWTVAEGETFDAGFRLIIKHN
KLVKQVTWHGKGDYFASVIPENGNAQVLIHQLSRRRSQNPFRRNKGMVQCVRFHPVRPFF
FVATQRYVRVYNLLKQELTKKLMTNCKWVSSMAVHPGGDNVICGSYDSRLAWFDLDLSTK
PYKVLRHHKRALRGVAFHRHYPLFASASDDGTVIVCHGMVYSDLLQNPLIAPVKLLRGHE
ITRDLGVLDVIFHPTQPWVFSAGADSTIRLYT
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaagcatgtcggtggctgggagaagtggcggcaagagcgggggaaataag
aggtcagctccagcgctggagcccgaggagcagcttcccatctttgaaagctcagcagtt
gatgaggatgccggtgatctgtcagacagtgaagagagcatgttttctggtctggaggat
tcagggagtgacagcagcgatgaggaagatgaccgtgagggggacgagagtgatgaagac
agtgacagtggagttgaagagaatagtgtgaagaaggatatcaaggtcaggaaagaggaa
ggtgaaagctgcggaaacttggtagagtcagacagcaccctgcggccagagcagtcgggg
ttgacccctcctgtggatgagtacaaggaggacagctcggatgaagaggatatccggaat
actgtgggtaatatccctatggaatggtacaaagactatccacacattggatatgactta
gatgggaaaaagatctacaaaccaatccgaaataaggatgaactggatgaatttctggat
aaaatggagaatccggattactggcgtaccgttccagataagatgactggcactgacatc
cggcttacagatgaacaaatagaccttgttcacaggattcagaagggacagtttggagat
gccaagtttgacccacatcagccctccattgatttctttacccatgagacgatgattcac
cctgtgaccaaccatccagctcacaaacgcagcttcgttccatcactcattgagaaggaa
aaggtgtcaaagctcgtgcatgcaatcaaaatgggctggatcaaaccgcgcaagcctcgc
gatgacacaccacggtactatgacctgtgggcgaaggaagaccccaatgcaatcctaggt
cggcataagatgcatgttcctgctccaaagctgaagcttccagggcacgaagagtcttat
aaccccccacctgaatatttattaacagaggaagagagacttgcctgggaacagcaggag
cctgaggaacggaaacttaacttcctcccgcagaagtttccatctttgcgtgctgtgccg
gcgttctcacgtttcatccacgagcgcttcgagcggtgcctcgatctctacctctgtccg
cgacagcggaagatgcgggtgaatgtggacccagacgatctgataccaaagcttcccaag
ccgaaagacctgcagccattcccaaccactcaagctctggtttacacaggccacacgaac
ctggtacggtgcatcagtgtctctcccagcggccagtggctggcgtcaggttcagatgac
tacacagttcgcttctgggaggttgccacagcccgctgcttgaagaccattgaggtggaa
ggagctgtgaagagcattgcttggaaccctaaccctgttcactgtcttgtggcgttggct
gttgaacactctgtcatcatcatcaatccctgtctgggtgataagttattgtacaacacc
accgaccagctaatcgcatcgttcgagaagcctgacgaggagccgccccagcccgtggag
tggacagtggctgagggagagacttttgatgcaggattccgactgatcatcaagcacaac
aagctggtgaagcaggtaacgtggcacggcaagggcgactactttgcctcagttatcccg
gagaatggcaacgcccaggtcctcatccaccagttgagccggcggcgcagtcagaaccct
ttccgcaggaacaaaggaatggtgcagtgtgtccgtttccaccctgtccggcccttcttc
ttcgtggccacacagcgctacgtccgtgtgtacaacctcctcaagcaggaactcaccaag
aaactgatgaccaactgcaagtgggtgtccagcatggccgtccaccctgggggagataat
gtgatctgtggaagttatgacagccgcctggcctggttcgacctggatctctccaccaag
ccttacaaagtgctcaggcatcacaagagagctctgcgaggtgtagctttccacaggcat
tatccgctttttgcctcggcatctgacgatggcacggtcattgtctgccatggaatggtg
tacagcgacctgctccagaacccgctgattgcacccgtgaagctgctgaggggccatgaa
atcacccgggacctgggcgtgctggacgtcatcttccatcccacccagccgtgggttttc
tccgcaggagcagacagcaccatccgcctctacacctag
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