Hemitrygon akajei (red stingray): 140732486
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Entry
140732486 CDS
T11019
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140732486 (scrib)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
AbLIM_anchor
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
140732486
NCBI-ProteinID:
XP_072911316
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All DBs
Position
8:complement(179326188..179672756)
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AA seq
1817 aa
AA seq
DB search
MLRCIPLWRCNRHIEAVDRRHCSLSGVPEEIYRYSRSLEELLLDSNQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRL
PDGFTQLRILAHLSLNDVSLQFLPSDIGNLSNLVTLELRENLLKTLPTSLSFLVKLEELD
LGSNELEVLPDTLGALPNLRELWLDRNQLTALPPELGNLKRLVCLDVSENKLEKLPDEIS
GLVALTDLLLSQNPLELVPDGIGQLKQLSILKVDQNRLTHLTEAVGDCTHLTELILTENL
LTTLPKSLGKLKLLTNLNVDRNRLVDLPAELGGCASLNVLSLRDNRLTHLPPELAKASEI
HVLDVAGNRLVNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGDKVLTCYLLPQQP
SPSLENLLSDSLDETWLEPNLNRVSVIQFQEEPAHGEENDEEADRRGGLHRRATPHPSEL
KVMKQAIEERRGEALTMKAQEPPESPESPEPPAPGSEGERLNAESDQSPDCRLSNGELCP
ITNDPEPAVTSLPTEQALEEQTSDSEDHNEEKEEEDDEDGYFEPTVRFTDDTVMRGEGEE
GVGEGDSFVAEKQRLIRKDTPHYKKQFKINKLPRPEAVMAMLQAIPSTEVPEQGGQEPEC
SLPEVRAERTSQPPVKGVSFDQVNNLLIEPARIEEEELTLTIHRLTGGLGISIAGGKGST
PYKGEDEGIFISRVSEEGPAAQAGVRVGDKLLEVNGVRLQDAEHHQAVEALRSAGGLVTM
AVLRERMVEPENAITVTPLRPEDDYAPRERRGARRWAEETAGGLCERFSTCLVRDERGLG
FSIAGGKGSTPYKAGDTAIFISRLAEGGCAHRDGILRVGDRVISINGVEMAEARHDHAVA
LLTGSAPTISLVVEREVTGSGQPANGSPSPQIARPQSPPPADTYTPGDSPPHSHRSTEDL
YPVQEVTLLKTGGPLGLSIVGGSDHASHPFGIQEPGVFISKVVPDGLAAQVGLQVGDRIL
EVNGIDLRHATHQEAVMALLSHQQQIRLLVRRDPPPPGMQEIRIEKLPGEKLGISVRGGA
KGHPGNPFDPTDEGIFISKVSVSGAAGRDGRLRPGLRILEVNNQSLLGTTHSEAVRILRG
VGDTLTVLVCDGFDPSTAPTLTESSPGVIVNPFASGMGRKNSMESISSIDRDMSPEEVDI
LQKEIEMVRESSLWEQEELEKVERMRREQEEATRKLEEEETQCTEPMKLDYRTLAALPNS
GIHRVPRTSSSSNSVSSSSVPPEFGSSPSVPPPTKPGVIHPVSRVRSALGPVDGRNSPNP
FQTMEEQAAPRDADHAVHRNFRAKPSPEEGEDGVFTVAVHGVEEGHSPRSYPTPTGNAWA
PGSGRRLETEVPSLVALNSPEQQSFRERQKYFEMEVRQPSAERPKRVSLVAEDDLRKMKE
EEERKMRQKGECERMALPEEEDEEEDDEEKMSDLSGQGTVVIEGVEYKIERLDGRSWHSP
PSGGSHPSGVGGDRAVSADSPGSGDQQSDSVTGLSSQYAEPHAPIRTAKAERRYQERLRM
QSPDLPVGRDKELSPAEKRALEAEKRAMWRAARHQALEDDLRHYEQDRARRLRQSRQRAA
PGPGPVGGLKLLPLLRPQLPCTDLRMKSLEQDALKAQMVIAKSKETRKRSPLDHLSESPS
PVATPSPTPLDDHSPRSVTSPGRLSWSDKKFDYRQFAAIPSSKPVYEIQSPDLLDEVTPI
TDAGSSGDGRVLWGGRGLRYTIRTGTMATGTRLVEDGEDRGDRPAAPNLLALGSVNTYSP
RRSTAPHPLTAETTAPT
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatccccctctggcgctgcaaccggcatatcgaggcggtggaccggcgc
cactgctcccttagcggcgtccccgaggagatctaccgctacagccgcagcctggaggag
ctgctgctcgattccaaccagctgcgggagctgcccaagcccttcttccggctgctgaac
ctgcggaaactgggcctgagtgacaacgagattcaacggctgccgccagaggtggccaat
ttcatgcagcttgtggagcttgacatctctcgaaacgatatcccagaaattccggagagt
attaaattctgcaaatctctggaaattgctgattttagtgggaaccctctttccaggctt
cctgacggattcacacagttacggatccttgcacatctctccctcaatgacgtatctctg
cagttcctgccaagcgacatcggcaacttatcgaacctggttacactggaactccgggag
aaccttctaaagacactgccaacatctctgtctttcctggtgaagctagaagagttggac
ctgggcagcaatgaacttgaagtgctgccggatactttgggagctctgccaaaccttcgg
gaactgtggctggacaggaatcagcttactgcactgcctccggaattgggaaatctcaaa
cgcctggtctgccttgatgtttcggaaaacaagctggagaagctccctgatgagatcagt
gggctggtggccctgacagacttgctcctctctcagaaccccctggagttggtaccagat
ggcattggtcagctgaagcagttatctattctgaaggtggatcagaatcggctaacccat
ctgacagaagctgtgggcgactgcacgcacctgacagagctgattctcaccgaaaacctg
ctcactacacttcccaagtcgcttggaaagctgaagttgttgacaaatctgaacgtggat
cggaacagactggtggatcttccggctgagctgggaggctgtgcgagtttaaatgtactg
agtctccgagacaacagactaacacatctcccacctgaactggccaaggcgtctgagatc
catgttctggatgtggctgggaacaggttggtgaatctcccatttgctctgacgaacctg
aatctgaaggcactgtggctcgcagagaaccagtctcagccaatgctcaaattccagacg
gaggacgatgagaagacaggtgacaaggttctcacctgttacctgctacctcagcaaccc
tccccaagcctggagaaccttttgagtgacagcctggatgagacgtggctggagccgaac
ttgaaccgcgtcagtgtgatccagttccaggaagagcctgcgcacggcgaggagaatgat
gaagaagcagacagacgtggtggcttacaccgcagggcgaccccacatcccagtgagctg
aaggtgatgaaacaggcaatagaagaacgcagaggagaggcactcaccatgaaagcacag
gagccccccgagtctccagaatctccagagcccccagcaccggggtctgagggagagcgg
ctgaatgcagagtcagatcagagcccggactgccgcctgtcaaatggtgagctgtgcccc
atcacaaacgatccagaaccggccgtcacttctctgccaacagagcaggctttagaggag
cagactagtgactccgaggaccacaatgaggagaaagaggaggaagatgatgaagacgga
tactttgagcccacagtacgattcacagatgacacagtgatgaggggtgaaggagaggaa
ggagtgggcgagggcgattccttcgttgccgagaagcagcgtctgattcgtaaggacacg
ccgcactacaagaagcagttcaagatcaacaagctgccgaggcccgaggcagtgatggcc
atgctgcaagctatacccagcaccgaggtgccggagcagggaggtcaggagcccgagtgc
agcctgccggaggtcagagccgaaaggacctctcagccccctgtgaagggggtctccttt
gatcaagtcaataacctgctgatcgagcctgctcgaattgaggaggaagagctgaccctg
accattcaccggctcactggaggactgggtatcagcatcgctggtggcaaggggtcaaca
ccctacaagggcgaggatgagggaatctttatttcccgagtgtcagaggagggtccggca
gctcaggctggggtccgagttggagataagctgctggaggtgaacggcgtgcggctgcag
gacgcggagcaccaccaggccgtggaggcgctgcggagcgcggggggcctggtgaccatg
gcggtcctgcgtgagaggatggtggagccagagaacgctatcactgtcacgccgctgcgg
cccgaggatgactacgctccccgggagcggcggggagcacgcaggtgggcggaggagacg
gccgggggcctgtgtgagcggttctccacgtgcctggtccgtgatgagcgtggcctgggt
ttcagcattgccggcggcaagggctccactccctacaaagcaggagatacggcgatcttt
atctcacgattggcagaagggggctgtgctcacagagacgggatcctgcgcgttggtgac
cgggtgatctcgatcaatggggtagagatggcagaagccaggcatgaccacgcggtagct
ctccttactggctcggcacccaccatcagcctggttgttgagcgcgaggtgacggggagc
gggcaacctgccaacggctcccccagcccacagatcgcccgacctcagtcacccccacct
gcggatacctacaccccaggcgacagccccccacacagccaccgcagtactgaggacctc
taccctgtgcaggaggtcacgctgctgaagacggggggcccactgggcctcagtatcgtc
gggggaagtgaccatgccagtcatccctttggcatccaggaacccggtgtcttcatctcc
aaggtagttccggatggactggctgcccaggttgggctgcaagttggagaccggatcctg
gaggtgaatggtatcgacttgcgtcatgctacacaccaggaggcagtgatggcccttctc
tcccaccagcaacagatccggctcctcgttcgtagggaccccccgcccccggggatgcag
gagatccggattgagaaactcccaggggagaagctgggaatcagtgtgcgagggggagca
aaaggacaccctggcaatccgttcgatcccactgatgagggtatcttcatttccaaggtg
agcgtgagtggagcagcaggccgtgacgggagactgcggccagggctgcgcattctggaa
gtgaacaaccagagcctcctgggcaccacccacagcgaggccgtccgcatcctaaggggc
gtaggcgacaccctcactgtcctcgtgtgtgacggctttgaccccagcacggcccccact
ctcactgagtcatcccctggcgtcattgtgaacccctttgcctctgggatgggtcgaaag
aacagtatggagagcatctcatccatcgatcgggatatgagccctgaagaagtggatatt
ctgcagaaggagattgaaatggtccgggagtcatcactctgggaacaagaggagctggag
aaagtggagagaatgcggagggaacaagaggaggcaacgcggaagttggaggaggaagag
actcaatgcactgaaccaatgaaattggattataggactctggcggctttacccaacagt
ggcatccaccgggtgcctcggactagctccagcagcaactcagtgtctagtagcagtgtc
ccaccagagtttggcagctcaccctctgtcccaccgccgacaaagccaggagtcattcat
ccagtgtcccgggtcagatctgcccttggtccagttgatgggaggaacagtccaaaccca
tttcagaccatggaggagcaggcagcaccacgggatgctgaccatgctgtacacagaaac
ttcagagccaagcccagccctgaggagggtgaggacggcgtgttcaccgtggcagtgcac
ggggtggaggagggacattcgccaaggagctacccaacacccaccggcaatgcctgggcc
ccgggcagcgggaggaggctggaaacagaggtgccatctctggtggcattgaacagcccc
gagcagcagtcattccgggaacggcagaagtactttgagatggaggtgaggcagccgtct
gctgagcgacccaaacgggtctcgctggtggccgaggacgatttacgcaagatgaaggag
gaggaagagcggaaaatgaggcagaaaggcgagtgtgagcgcatggcactaccagaggag
gaggatgaggaggaggacgatgaagagaagatgtctgacctgagcggtcagggaacggtg
gtgatcgagggggtggagtacaagatagagcgtcttgatgggcggtcctggcactcccca
ccctctgggggctcgcatcccagtggggttggaggggacagagctgtgtccgcagacagc
cccggcagcggagaccagcagtccgactcagtgacgggattgtcatcgcaatatgccgaa
ccccatgctccgatccggacggcgaaggcagagcggcgctaccaggaaagactaaggatg
cagagcccagacctcccagtgggacgggacaaggagctgtctccggcagagaaacgggca
ctggaggcagagaaacgggccatgtggagagcagcgaggcaccaggccctcgaagacgac
ctcagacactatgaacaggaccgtgcgcggcgtctccgccagtctcgccaacgggcagcg
ccggggcctggccctgtgggcggcctgaagctcctaccgctgctcaggccgcagctgcct
tgcactgacctcaggatgaagtctctggaacaggacgccctgaaagctcagatggtcatc
gctaagtcgaaagagactcggaaacgcagccccctcgaccatctctccgagtcaccctct
ccagtggcaacaccctcgcctactcctctggatgatcacagtcctcgcagtgtgacctct
cctgggagactgtcctggtcagacaagaagtttgattaccggcagtttgcagctatccca
tcctccaaaccggtttacgaaatccagtcaccggacctcctggatgaagtgactcccatc
actgacgccggatcctcaggtgatgggagggttctgtggggagggcgggggctcaggtac
accattcgcacagggaccatggcaacaggtacccgccttgttgaagatggagaggacaga
ggagatcggcctgctgcaccaaacctgctggcgctgggctctgtcaacacatacagcccg
agacggtcgacagcaccccatccactgacggcggagaccactgcccccacgtga
DBGET
integrated database retrieval system
