Hemitrygon akajei (red stingray): 140732496
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Entry
140732496 CDS
T11019
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140732496 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140732496 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140732496 (vps28)
Membrane trafficking [BR:
haka04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
140732496 (vps28)
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140732496 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
140732496 (vps28)
Exosomal proteins of colorectal cancer cells
140732496 (vps28)
Exosomal proteins of bladder cancer cells
140732496 (vps28)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
BsaP
Motif
Other DBs
NCBI-GeneID:
140732496
NCBI-ProteinID:
XP_072911362
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All DBs
Position
8:complement(180540332..180573332)
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AA seq
220 aa
AA seq
DB search
MFQGIAASTGAQGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKTYIKDCVT
PTEYTAACSRLLVQYKAAFRQVQGADITSIDEFCRRYRLDCPLAMERIKEDRPITIKDDK
GNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNLPPDFEGKEKVDQ
WLQKLSAMLASDELDDVQVRQMLFDLESAYNSFNRFLHSS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttccagggtattgcagccagtacaggagcacaaggcaacaagccggaactttatgag
gaggtgaagctgtacaaaaatgctcgggaacgagagaaatatgacaacatggcagaactg
tttgctgttgtaaagactcttcaggctttggagaaaacctacatcaaggactgtgtcact
ccaactgaatacacagccgcctgctcccgcctactggttcagtacaaagcagcgttcaga
caggtgcagggagcggacatcacctccatcgatgagttctgcaggcgttacaggctggac
tgtccgctggccatggagagaattaaggaagaccgtcccattaccatcaaggatgacaaa
ggaaacctgaatcgctgcattgctgacattgtttcgctcttcatcacggtgatggacaag
ctgcgtctggagatcagagccatggatgagatccaacccgacctgcgagagctgatggag
actatgaaccggatgagtaacctgccaccagattttgaaggaaaggagaaagttgaccag
tggcttcagaagctcagtgccatgttggcttctgatgaattggatgacgtgcaggttcgt
cagatgctgtttgatctcgaatctgcctacaactcgttcaacaggttcctccactcgtcc
tga
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integrated database retrieval system
