Hemitrygon akajei (red stingray): 140733170
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Entry
140733170 CDS
T11019
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03410
Base excision repair
haka04210
Apoptosis
haka04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
140733170 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140733170 (parp1)
04217 Necroptosis
140733170 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haka03032
]
140733170 (parp1)
03036 Chromosome and associated proteins [BR:
haka03036
]
140733170 (parp1)
03400 DNA repair and recombination proteins [BR:
haka03400
]
140733170 (parp1)
Enzymes [BR:
haka01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
140733170 (parp1)
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140733170 (parp1)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
140733170 (parp1)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
140733170 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
140733170
NCBI-ProteinID:
XP_072912211
LinkDB
All DBs
Position
9:complement(62344430..62399902)
Genome browser
AA seq
1031 aa
AA seq
DB search
MAEDKLFRAEYAKSGRASCKKCGESIAKDSLRLAIMVQSPMFDGKVPHWHHYACFWKRAR
VVSPTDVDGLSDLRWDDQEKIKKAIETGGGGGASRSGHGLDDEVPGDDRYLPGTSTPVDV
LDGKGGEQGEGKGEKTLSDFAVEYAKSNRSTCKGCSKKIEKDTVRVSKKMIDPEKPQLGM
IDRWYHPDCFVGSRAELGFLPRYSAAQLKGFNTLTGDDKAELKKKLPATKTEGKRKGDEV
DGEVTSKKKKKKEEEKKVVKQEKELKEQSQLIWGIKDALKKYCSTNDLRELLIANGQEIP
SGESAILDRVSDGMAFGALQPCTECQGQLVLKDSAYVCTGNITAWTKCSFSTQVPLCKDW
VIPKEFHSIAYLKKFKFKRQNRVFAPAPPAAESSPTDAPSAVTGPPLTNLKVILLGKFSK
GKDELKSLVEELGGKTTNSASKAQLCVSSQKEVDKMTKKMEEVKEANVRVVSEDFLIDLK
SGKSLQDLFSVHGISSWGAEVNSEVPEPPVAGKSTGNKTVKNTSGKVKQEEGSGKSEKKM
KLTVKGGGAVDPDSGLEDSAHVFEQSGRILSATLGLVDITRGTNSYYKLQLLEDDNRKRY
WVFRSWGRVGTPIGGNKLEKMSSKEHAIDHFLGLYEEKTGNAWHSKNFTKYPNKFYPLEI
DYGQDEEAVKKLTASSGTKSKLDKAVQELIRTIFDVESMKKALVEFEIDLQKMPLGKLSK
RQIQSAYSILNEVQQVVASGGSESQILDLSNRFYTLIPHDFGMKKPPLLNNEEYIQTKVQ
MLDSLLDIEVAYSLLKDGMEDDAKDPIDINYEKLHTDIKVLDKQTDEAKIIIDYVKNTHA
ATHNQYDLDVLEIFKIKREGEEQRFQPFSDLHNRQLLWHGSRTTNFAGILSQGLRIAPPE
APVTGYMFGKGVYFADMVSKSANYCHTSQADPVGLVLLAEVALGNMYELKRANHITKLPK
GKHSVKGVGKTAPDPNATINLGGVEVPLGKGVQASITDSSLLYNEYIVYDVAQVHLKYLL
RLNFKYKTSLW
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggacaagctcttcagggctgagtatgcaaagagcggacgcgcctcctgtaaa
aaatgcggggagagtattgcaaaggactctctgcggctcgcaattatggtgcagtcgccc
atgttcgatggaaaagtcccacactggcatcactacgcctgcttctggaagcgagcccgg
gtggtgtcacctactgacgtggacggactgtcagacctgcggtgggatgatcaggagaag
atcaaaaaggccattgaaacgggaggtggaggaggagcatcgaggagtgggcatggcctt
gatgatgaggttcctggtgatgatcgttatcttcctgggacatcaactcctgtagatgtc
cttgatggaaagggcggtgagcaaggagagggcaaaggggagaagacacttagtgacttc
gcagtggagtatgccaaatccaaccggagcacttgcaaaggctgcagcaagaaaatagag
aaggacaccgtgcgcgtctccaagaagatgatcgaccctgaaaaacctcagctgggcatg
attgaccgctggtaccatcccgattgttttgtggggagcagggctgagctgggcttcttg
cccaggtatagtgctgcccagctgaaaggcttcaacaccctgactggtgacgacaaggct
gagctgaagaagaagcttccggcaaccaagacagaagggaagcgaaaaggggacgaggtg
gatggggaagtgacgagcaagaagaagaagaagaaggaggaggagaagaaagtggtgaaa
caggagaaggagctgaaggagcagagtcaattgatttggggcattaaggacgccctgaag
aaatactgttccacgaatgacctgcgtgagctgctcatcgccaacgggcaggagattcca
tctggagagtcggcgatcctggaccgggtgtcggatgggatggcctttggagcgctgcag
ccctgcaccgagtgccagggccagttggtgctgaaggattcggcctacgtctgcactggc
aacatcactgcctggaccaagtgcagcttcagcacccaagtgcccctctgcaaagactgg
gtcattcccaaggagttccacagcattgcctacctgaagaaattcaagttcaagagacag
aaccgggtctttgcgccggcccctccagctgctgaatccagccccactgacgccccttct
gccgtgacaggcccaccactgacgaacctgaaggtgatcctcctggggaaattctcgaaa
ggcaaggacgaactgaagagcctggtggaggagttggggggcaagactaccaactcggcg
agcaaggcccagctgtgtgtcagctctcaaaaggaggtggacaagatgaccaagaagatg
gaggaggtgaaggaagctaacgtccgggtggtgtccgaggacttccttatcgacctgaag
tcggggaagagcctccaggatttgttctcagtccatggaatttcttcctggggggctgag
gttaactccgaggttcccgagcctcctgtcgctgggaaatctactgggaacaagactgtg
aaaaacaccagtggcaaagtcaagcaagaggaaggctctggcaagtcagagaagaagatg
aagctgacggtgaaaggaggcggggcagtggatcctgactcggggctggaggactcggcg
cacgtctttgagcagagcggccggatcctcagcgccacgctaggcctggtcgacatcacc
cggggcaccaactcctactacaagctgcagctgctggaggatgacaacaggaagagatac
tgggtcttcaggtcctggggccgagtggggacccccatcggtggcaacaagctggagaag
atgtcctccaaggagcatgcgatcgatcacttcctgggtctatacgaggagaagacgggc
aatgcctggcactccaagaacttcaccaaatatcccaacaagttctaccccttagaaatc
gactatggccaggacgaggaagctgtgaagaagctgactgccagctctggtacaaaatca
aagctggataaggccgtacaggagctcatcagaaccatcttcgatgtggaaagtatgaag
aaggccctggtggagtttgagatcgaccttcagaagatgcccttgggtaaactgagcaag
aggcagatccagagtgcttactccatcctcaacgaggttcagcaggtggttgccagtggt
gggtcggagtctcagatactggacctgtccaatcgcttctacacactcataccacatgac
tttgggatgaagaaacctccgctcttgaacaatgaagaatatattcagaccaaggtccag
atgctagacagcctgttggacatcgaggttgcatacagtctcctcaaggatggcatggaa
gatgatgccaaagatcccattgacatcaattatgagaagctgcatacagatattaaggtt
ctggacaaacagacagatgaagccaagataattatagattatgttaaaaacacacatgct
gccacgcacaaccagtatgaccttgatgtattggagatatttaagatcaagcgcgaaggg
gaggagcagcgtttccagcctttcagtgacctccacaacaggcaacttctctggcatggc
tcccgcaccaccaactttgctggcatcttgtcgcagggtctgcgcatcgccccacctgag
gctcccgtgacgggctacatgtttgggaagggggtctactttgcagacatggtgtctaaa
agtgccaactactgccacacatctcaggctgatccagtgggccttgtattgctggctgaa
gtagccctggggaacatgtatgaattaaaacgggccaatcatattacgaagttaccgaaa
ggcaaacacagtgtgaaaggtgtgggtaagactgctccagaccctaacgccaccatcaat
ttgggtggagtggaggtgccgctgggcaaaggagtgcaggcgtccatcaccgactccagc
ttgctgtacaacgagtacattgtgtatgacgtggcccaggtgcacctcaagtacctgctt
cgactgaacttcaagtacaagacctccctgtggtga
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