Hemitrygon akajei (red stingray): 140733518
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Entry
140733518 CDS
T11019
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haka03400
]
140733518
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140733518
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
140733518
NCBI-ProteinID:
XP_072913051
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Position
9:128251682..128283596
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AA seq
989 aa
AA seq
DB search
MGVNDLWQILEPVKEYVPLQSLKGKTLAVDMSLWVCEAQSVKGMMGTVNKPHLRNLFFRV
SYLTLMDVRLVFVAEGTAPKLKADTMNKRNEMRRGGSRKPGSCTVRTGRSHFKSVLRECC
ELLDYLGNPWVCAAGEAEAMCAYLNENGYVDGCITNDGDAFLYGAQTVYRNLTINTKDPH
VDCYKMSAIRSQLGLDRDALIGLAILLGCDYLPKGVPGVGKELALRLVATMNGQSLLQRF
KLWKREFDETGTHDSIVKNKAHCSLCQHPGLAGKCATKGYQLSVSDQSCLLHSNVYKCPC
DCHQAEETRKNSSLENIIKKKATACEYFPFEEVIKEFLISKEQPIQKAQWRRPKLLLLQN
FVLDKMEWPRHYTCEKVLPLLSHYDMMERRLGKKDTGHLQPVSIVKIRIRNGIPCFEIQW
EKPEHYVFSNEQSEDSQNTVTTIEEQLLFGAAYPDITAQFHREKAEGKEKKHQKSKNKKR
DRTVPVPDEISQLMSRMNLQPLHKGLAAKMEPGPKSLGQETNPSNYTHMSSCVEVSAEYS
VLPKESWKESEKVISQPANHQSAEGEKSDNVSLFLRASENKMSPSTTSPSVSSMVAELHL
SDIDWNQSFSTPHSECTPIRQSDTSEQVSLVISANCCVPISSSIKLTEDEASKENIADPS
QECVRQNMELFYEDTFMLQDFDQLPLKERILLKNSRQFIRLPQPNFNSSENNFLLCSTSI
KGDLPSVEEHTESLVEEELANNFNKKKLTRTEFSETQEAGTESYSSDKTAGHHTRSLTVP
EKKNVKDSMKRFVGTRDPTVFSNQISKLESSSSTVEKNKVSKQLKMKLANGSRPTVATSV
CCNMYLSSEDSDTEDSINRKQRRGIKLRAEKNTVTPFCSSKLDQPQHNKSRPISGRICSI
NNQAVNIVGKNAQLQLMPKDSKDETKVDKSQKNTLETKIHRGDSAILLESPLRGLENYKH
FNVDEDSIIVISDSPLPLSERLNLSLQSS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgatctgtggcagattttggagcctgttaaagaatatgttccattgcaa
agtcttaaagggaaaacgttagctgtggatatgagtttatgggtctgcgaggctcaatcg
gtgaagggtatgatgggaacagtgaacaagccgcatctcaggaatttgtttttccgcgtt
tcatatctcactttgatggatgtgagacttgtctttgtggcagaaggtactgcaccaaaa
ctgaaggctgacacaatgaataaacggaatgagatgagacgtggtgggtccaggaagcca
ggaagttgtactgttcggactggaagatcccattttaaatctgttcttagagagtgttgt
gaattgctggattatttgggtaatccatgggtttgtgcagctggtgaggctgaagccatg
tgtgcctatctgaatgaaaatggatatgttgatggctgcatcaccaatgatggcgatgct
tttctatatggtgcccagactgtgtacagaaatttgacgataaacacgaaggatccccat
gtggactgctacaaaatgtcagcaataagatcccagttaggccttgaccgggatgcatta
attggtttggcaattctgcttggatgtgactacctgccaaaaggagttccaggggttggg
aaggaactggctttgaggttggttgcgacaatgaatggacagagtctgctacaaaggttt
aagctatggaaaagagagtttgatgaaactggtactcatgattccatcgttaaaaataaa
gcacactgctcattgtgccaacacccaggattggctgggaagtgtgcaaccaaaggttac
cagttgtctgtgagtgaccagtcttgtttactgcatagcaatgtctacaaatgtccttgt
gattgtcatcaggcagaggagacaaggaaaaacagctctctggaaaacattatcaaaaaa
aaagccacagcttgtgagtattttccattcgaagaggtgatcaaagaatttcttatcagc
aaagaacagccaattcaaaaagctcagtggaggcgtccaaagctgttactacttcagaat
tttgttctggataaaatggaatggcctagacattacacatgtgaaaaagtgctgccatta
ctttcacattacgacatgatggagagaagactaggtaaaaaggacacaggccacttacag
cctgtaagcattgtcaaaataagaatccggaatgggattccatgctttgaaattcaatgg
gaaaaaccagaacattatgttttctcaaatgaacagtctgaagattctcagaatactgtg
acaaccatcgaggagcaacttttgtttggagcagcgtatccagacattactgctcaattt
catagggagaaagctgaaggaaaggagaagaagcatcaaaaaagtaaaaataagaaaaga
gacagaacagtaccagtgcctgatgaaatctcgcaattaatgtcaaggatgaatttacaa
cctcttcataaaggtttggctgcaaaaatggaacctggtccaaaaagtttgggtcaagaa
acaaatccctccaactacacacacatgagttcttgcgttgaagtttctgctgaatattct
gtgttgcccaaagaatcctggaaggaatctgaaaaagtaatttcccaacctgcaaatcat
cagagtgcagaaggtgaaaaatctgacaatgtgtctttatttctcagagcatcagaaaat
aagatgagtccctctactacttccccatcagtatcttcaatggttgcggagctgcacttg
agtgacattgactggaatcaatcatttagtacaccacattcagagtgtactcctataaga
caaagtgatacttctgaacaagtttcattagttattagtgcaaattgttgtgttcccatt
agttcttccatcaaattaacagaagatgaggcatcgaaggaaaacattgcagacccttct
caggagtgtgttcgacaaaacatggagctattttatgaggatacatttatgttgcaggat
tttgatcagctgcctttaaaagaacgaattctattgaagaattcacgccagtttatacgg
ttgcctcaaccaaattttaattctagcgaaaataacttcttgctgtgctctacttccatt
aaaggtgatttgccatctgttgaagaacatactgagtctcttgttgaggaagaacttgca
aataattttaataaaaagaaactgaccaggactgagttttcagaaactcaggaggcagga
actgaaagttactcgtctgacaaaactgctggtcatcataccaggtcattgactgtgcct
gaaaagaagaatgtaaaagactcaatgaaaaggtttgttggaactcgtgatccaactgtg
ttttcaaaccaaatttcaaagctagagagctcctcctctacagtggaaaagaacaaagta
agcaaacagctcaaaatgaaactagcgaatgggagtagaccaacagttgcgacaagtgtg
tgttgcaacatgtatttgtctagtgaagatagtgatacagaggattcaataaatagaaag
caaagacgaggcatcaaattaagagctgagaagaacacagtgactccattctgctcttca
aaactggatcaacctcaacataacaaatccaggcctatctctggtagaatttgtagcata
aacaatcaggctgttaatattgtagggaaaaatgcccaattacaattaatgcccaaggac
agcaaagatgagactaaagttgataaatcccagaaaaatactttagaaactaaaatacat
agaggtgacagtgccattctgctggaatcaccattgagaggtctggaaaattacaagcat
ttcaatgttgatgaggattccattatagtaataagtgacagtccccttccactttctgaa
aggctgaatctctctctccagagtagttga
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