Hemitrygon akajei (red stingray): 140734235
Help
Entry
140734235 CDS
T11019
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140734235 (rlim)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140734235 (rlim)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140734235 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
CBP_BcsO
zf-HC5HC2H_2
zf-RING_4
zf-HC5HC2H
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
140734235
NCBI-ProteinID:
XP_072914027
LinkDB
All DBs
Position
10:complement(25263384..25329149)
Genome browser
AA seq
660 aa
AA seq
DB search
MENAANEDGGGNEHADAYSTNEDQRRHQSDRLDREEAFYHFVNNLSEEEYRLMRDNNLFG
TPGEITEEELTRRLHQVKNGIIPNNPVARRSEGSGDRGAEGLDEGSSGDSLLEWLNAFRQ
TGNTTRSGQSGNRSWRAVSRTNPTSGDFRFSLEINVSRGRIDQSAEMESEQLMDTSNAAT
TLPPTEEAVTPVPSRNINPSPPTTAQPAQAVTAPPVTITEESVQSEPERSEAGVTRQSRR
PNGEFSYENRSEPFRQDLETQPPQGRVQTGRSRSPERRRSSRTRSNRSRSPLHPIEGTSR
SRRQTSLRSVRSSSESGTEGSSRTRQHVVSRQNRVGDEVWTEVSNPFSASESSEPRESSQ
EAVDPTEASSNDSSTAGRRPPTIMLDLQVRRVRPGENTDRDSIANRTRSRSQTTDNTVVY
ESERGGLRRTFSRSERAGVRTYVSTIRIPFRRISDSGLGEAASVALQTILRRIMMGGELS
SFVDSDSDSETSNRGRNPTQEVSESQNSTSEPPNVASMGRTGEQQAGVQRSDSETDSTTG
ARRRETQQARGLFGLEESGTLPILRLAHFFLLNDEDEDDQPRGLTKEQIDNLSTRNFGES
DAIKTCSVCISEYTAGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRQAVLGRAVGDNIG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctgctaatgaagatggtggaggtaatgagcacgctgacgcttattctact
aatgaagatcagcgcaggcatcagtcggaccgcctagaccgggaggaagccttctatcat
tttgtcaataacctgagtgaagaagaatacaggctgatgagggataataacctgtttggt
acaccaggagaaattacagaagaagaactcaccaggcgtctgcatcaagtaaaaaatggc
attattccgaacaaccctgttgctcgaaggagtgaaggttctggtgacagaggtgctgaa
ggtttggacgaagggtcaagtggcgattcacttctggagtggctgaatgcgtttagacag
acgggtaacacgacgagaagtgggcaaagtgggaatcgctcatggagagcagtcagtcgt
acaaacccaacaagtggtgattttagattcagcctggaaattaatgtcagtcgaggtaga
atcgatcaaagtgccgagatggaaagtgagcagctcatggacacttcgaatgcagcaaca
acattgccaccaacagaagaggctgtgacgcctgtaccatctagaaacataaacccatcc
ccaccaacaacagcacaacctgcacaagcagtaacggctccaccagtaaccataacggag
gaaagtgtccaaagtgaaccagaaagatctgaggctggtgttactagacagagtagaaga
ccaaatggagaattttcttatgaaaacagatctgaaccttttagacaagaccttgaaacc
cagccacctcaaggtcgtgtacaaactggcagaagcagaagtccagaacgtcgaaggtcc
tctagaacaagaagcaatcgaagtcgttcacccttgcatccaattgaaggaacgagtaga
tcacgacgccagacttccctccggtctgtgagatccagttccgagagtgggacagaggga
agttccagaactaggcagcatgtggtgtccaggcagaatcgggttggagatgaagtgtgg
acagaagtatctaatcctttctcggcgtctgagtcaagtgaacctagagagtcttcccaa
gaagcagttgatcctacagaagcttcctccaatgattcctctacagctggacgacgacca
cctaccattatgttagatctgcaagtgagaagggtgagacctggtgaaaataccgataga
gatagcatagcgaataggacccgctcgagatcccaaacaacagacaacacagttgtgtat
gaaagtgagcggggtggactgaggcgcactttctcgcgctcagagagagcaggggtacga
acttatgtaagcaccattcggatcccttttcgcaggatttctgactcggggcttggggag
gctgcctcggtggctctccaaaccatactgcgccgaataatgatgggtggggaattgagt
tcctttgtggacagtgacagtgactctgaaacaagcaacaggggccgaaatccaacgcag
gaagtctccgagtcacagaacagcacaagtgagcctccaaatgttgcttcaatgggtaga
acgggagagcagcaggcaggagtgcagcggagtgacagtgaaacagatagtacaactggt
gccaggagaagagaaactcagcaggctcgaggtttgtttggacttgaagaaagtggcact
ctgcctatacttaggcttgcccatttcttcttgctgaatgatgaagatgaggatgatcag
ccaaggggactgactaaagagcaaattgacaacctgtccaccagaaattttggggagagc
gatgcaattaaaacctgcagtgtgtgcattagtgagtacactgccggcaacaagcttcgc
aaactcccctgctcacacgagtatcatgttcactgcattgatcgctggctgtccgaaaac
tccacgtgccccatatgtcgacaggccgttttaggtcgcgctgttggtgataacattggc
tag
DBGET
integrated database retrieval system
