Hemitrygon akajei (red stingray): 140734242
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Entry
140734242 CDS
T11019
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140734242 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140734242 (atrx)
03036 Chromosome and associated proteins [BR:
haka03036
]
140734242 (atrx)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
140734242 (atrx)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
140734242 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
140734242
NCBI-ProteinID:
XP_072914039
LinkDB
All DBs
Position
10:complement(26790600..26986915)
Genome browser
AA seq
2380 aa
AA seq
DB search
MARNAQSVLGMHVIVPSESKLNTLVQKLHEYLAQSTEQGEETLSSPELCVNQASGEGNPA
LFSISRMEHKEVSSQKSKSSGSSRSRRKPSFVTKHIVSDDETSNDNTSDCEKLTSNIEDT
DDLDVNCLPKGTVVVQPEPVWNEDKDNFRGPEFRNRNPKNKMETSKKRGDENLQGIVSCT
ACGQQVNHFHKDSVQRHPALKVLICKNCHKYYMSDDISRDADDMDEQCRWCAEGGNLICC
DFCHNAFCKSCILRNLGRKELSNIMDENKKWYCYVCNPEPLLDLVTACDSVFECLDQLWQ
QNKRKKDFEKFKFDNEKCKSPGPHDSDKSVDQDYKNTQRISSKDCNGQEKDTSSLKSLSS
GSGTITYSYKALKVPKEILKKARKLIDTTANLNISFVNFLKQKDLGESEPNVNMRQLRAF
KSVLGDLKKVHHALEEVIDKEIQDLETEQKKSSESLQDCVIKVEAQKSTKNENNAVPGKT
IAEKSVLTEDKSDQMEVTLVSSELDKATEDEKIKTDKDKLMLNPAVNSIANDCSLSDPLD
KNNSDAPQGSSSEGLESEMAEATLLNSLDEALHMGCVSSLTGGLFEASDSLLPDMDTVNN
SADQCAMPDTVLSNAPVESRNNSEKSSEFDSDSSTKCSVKREISTKLPSVSQKKGKKTAQ
GVRGKNLPKRSKRGVVEAGGGGDSEAEAGANEAESAGHDDKEVEVPGDIGSDAEAAGDGS
EGEAMRDNTDAGEVDDNSGAEVASASDTGEDKNHDTGEDSGDRNGDQVNIGLGDGISAAG
SITKNKKIAEKSEMSKTNFTKRRKKKSNEENVENDTANDALVLSEDPDTKRSPRIKTTPL
RRPGGAGTVNSRSEEDTDSGGGKKRRKSKNKSKDNEKVNSSGKVKTGRSKTSNESVKSEM
EESDPNKSDTLHKPGEQITSDSDEIPEVLRKAAVKHDSSSDADNKDSDSSQKGKKTRLFD
LRKRMPRANSTDGLKRKRKCSTSSSDVGGKERKRTSKRTCVINKKRRHHSDSSNYDSDLE
KEIKNLSKISAAKKSSSKKAKKQATEEDEDDSFKDDEKASAKSVQEKTTRLKRKKRAMER
KQTSSSSSDGDEAAEQMDKHDLPGEGSSDEQKIQPIMENVLLATGSRFCQSSGDEAEGNS
KNITQCASDDYDDDPENRIAKKMLLAEINANLSSNDDKSSEEESEEEKKSDQRNEQDDEE
NDEEEAEADSDSDSDFEMTKKPRYRHRLLRHKLSMSDGESGNEKKVKVKDGAKEGTRKNR
RKVSSNEGTTEEESDSDFQESQCSEEESDSDDKRKRPRTRASKKEAEESQRSYLLKKKRR
RIKVQENSSSEKSNSESGDKSNSDDEENEDDIKSPAKGRKKIRKILKDVNLRTETQNALK
EEEDRRKRIADREKERERLREQVEVLEGASPIQCPITTKLILDEDKETKECLVQVHRNLV
RKLKPHQVDGVQFMWDCCCESVSKALKELGSGCILAHCMGLGKTLQVVTFLHTVLLAEKL
EFRTALIVCPLNTVLNWINEFSKWQEGLDDDECLEVNELATVKRPQERAYLLERWVEDGG
IMILGYEMYRNLAQGRNVKSRKMKEMFQKTLVNPGPDFVICDEGHVLKNEASAISKAMNS
IRTKRRIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFMNPIQNGQCADSTLVDV
RVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMMPLQCKLYQYYLDHFTGV
GTSTEGGRGRAGTRLFQDFQVLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDTDE
TSMSLSSEDEKSKKKKKRGKKNESSSKESGSDNEVEVIKVWNSRSRGGGEGSMEEKPVES
AVKADDAKPSTGSNPGSPSADWYKEFITDADAELVHHSGKMAILFEILYMSEAIGEKVLV
FSQSLISLDLIEDFLEMANREKTDGKSDIYKGDGKWYRNIDYYRMDGSTSAQTRKKWAEE
FNDVTNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQIKPVF
VYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQLDDPNSE
KKKKRDTPVLPKDHILAEILQNRKDYLVGYHEHDSLLDHKEEEELSEEDRKAAWAEYEAE
KKGLSLRTNIATGTNFPGANFSLQATHFPFNIATLSAMSNQQLEDLINQGREKVVEASSS
IAGVRAEALEDLIAQVWKENPNLTEEQVQAVSLTKQATQELEIKRREAMYNDILSKQQLL
IRSVQQILMSRRQQQINQMAQQQQQQYPMTPLLNQFLSSRNPGPILGYPHLGLRGLSMYP
QTAPGIRPPPLQRAPPAPMQMKGQSPGPPQLKQGIKNSKK
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaatgcacaatcagtattaggaatgcatgtgatagtgcccagtgaaagcaag
ctgaatacattagtacagaagcttcatgaatatctggctcagtcaacagagcaaggtgaa
gaaaccctctcctctccagaactgtgtgtaaatcaagcatcaggtgaagggaacccggct
cttttttctatttcacgtatggagcataaggaggtgtccagtcaaaaatcaaagtcttcg
ggatcatcccgttctagaaggaaaccctcttttgttacaaagcacattgtatcagatgat
gaaacatcaaatgacaatacatctgattgtgaaaaactaacttcaaatattgaggacaca
gacgatttagatgtgaattgtttgcctaaaggcacagtagttgtacagcctgaaccagta
tggaatgaagataaagataactttcgaggacctgaatttagaaacagaaatcctaagaac
aaaatggaaacatctaagaaacgtggagatgaaaatctgcaaggaatagtcagctgcact
gcttgcgggcagcaagtaaaccactttcacaaggattcagtccagcggcatcctgcactg
aaagttcttatttgtaagaactgtcataagtactatatgagtgatgacattagcagagat
gctgatgatatggatgaacagtgcagatggtgtgctgaaggtggaaatctgatttgttgt
gacttttgtcacaatgcattttgtaaaagctgcatattgcgtaacctgggtagaaaagaa
ctttccaatattatggatgaaaacaaaaagtggtactgctatgtatgtaatccagagcct
ttactggatttggtcacagcttgtgacagtgtatttgagtgtcttgatcagctatggcaa
caaaacaaaaggaagaaagacttcgaaaagtttaaatttgacaatgagaaatgcaagtct
ccaggccctcatgacagtgacaagtctgtagatcaagattataaaaatactcaaagaatt
tccagtaaagattgtaatggacaggaaaaagatacaagttcattgaagagtctttcttca
ggatctggaactattacatattcctacaaggcattgaaagtaccaaaagagattctgaag
aaggctcgcaagctaattgatacaactgctaacttgaatattagctttgttaatttttta
aaacaaaaagacttgggtgagtctgagcctaatgtaaacatgagacaattgagagctttt
aaatctgtgcttggtgatctaaagaaagtacatcatgcattggaggaggttatagataaa
gaaattcaagacttggaaacggagcaaaaaaaatcttctgaatccttacaagattgtgtt
atcaaagttgaggcacagaaatccactaaaaatgagaataatgcagtacctggtaaaaca
attgcagaaaaatcagttttgacagaagacaaatctgatcaaatggaagtgactttggtt
tcaagtgaacttgataaggctactgaagatgaaaaaataaagacagacaaagacaaatta
atgcttaatccagcagtaaatagtattgctaatgactgttcattaagtgaccctttggac
aaaaacaattctgatgctccacaagggagctcaagtgaggggcttgaatcagaaatggca
gaagccactttacttaacagtttagatgaggcattgcatatgggatgtgtttcttcacta
actggaggtttgtttgaggcttctgactcattgctaccagatatggatacagtgaataat
tctgcagatcaatgtgcaatgccagatactgtgttatcaaatgcacctgttgaaagtcgt
aataattcagaaaaatcttcagagtttgactccgattcgagtacaaaatgttcagtgaaa
cgtgaaatttcaacaaaattgccctccgtttcacagaagaagggtaagaaaacagcacag
ggtgtacgtgggaaaaatttgccgaagaggagtaaacgaggtgtagttgaggcagggggt
ggtggtgatagtgaagcagaggctggggcaaatgaagctgagtctgcagggcatgatgac
aaagaagttgaggttcctggggatattggcagtgatgcagaggctgctggggatgggagt
gaaggtgaagcaatgagggataatactgatgctggtgaagttgatgacaatagtggtgct
gaagttgcatcagcatctgatacaggtgaagataagaaccatgatactggagaagacagt
ggtgacagaaatggtgaccaagttaatatagggcttggggatggcatcagtgctgcaggc
agtataactaaaaacaaaaagattgcagagaaatctgaaatgagcaaaacaaattttaca
aaaagaaggaagaaaaaatccaatgaagaaaatgttgaaaacgatactgcaaatgatgca
ttggttctgtcggaggaccctgatacaaagcgctcacctcgtataaagactacaccccta
agacgtcctggaggggcagggactgtcaattctagatcagaggaagacactgatagtggt
ggtggcaaaaaacggaggaaatcaaaaaataaatcaaaggacaatgaaaaagtaaattct
tcaggcaaagtcaaaactggccgatcaaaaacatcaaatgagagtgtcaagtctgagatg
gaagaatctgatcctaataaatcagatacattgcataaacctggtgaacaaattacctct
gattctgatgagataccagaggtgctgagaaaggcagcagtgaaacatgatagttcatct
gatgctgataataaggatagtgattcatcacaaaaaggtaaaaagacaaggttgtttgac
ctgagaaaacgaatgccacgagcaaatagcacagatggtcttaaacggaagaggaagtgt
tcgacctccagttcagatgttggtggaaaggaaagaaaaagaactagtaaaaggacttgc
gttattaataaaaaaagacgacatcattctgactcctccaactatgattctgacctagaa
aaggaaatcaagaacttgagtaaaatcagtgctgcaaaaaaatcatcttcaaagaaagca
aaaaagcaggcgacagaggaagatgaggatgattcattcaaagatgatgagaaagcttct
gcaaaatctgttcaagagaaaacaacgcgattgaaacgcaagaaaagagctatggaaaga
aagcaaacctcttcatcctcgtcagatggtgatgaagcagctgagcaaatggacaagcat
gatcttcctggagaaggaagcagcgatgaacaaaaaatacagcctatcatggaaaacgtt
ctgcttgcgactggatctcgattttgccagtcatcaggtgatgaagcagaaggcaattca
aaaaatatcacccagtgcgccagtgacgattatgacgatgatcctgagaatagaattgcc
aagaagatgctattggcagaaataaatgcaaatttatcatctaatgatgataaatcttca
gaggaagaatctgaagaagagaagaaatctgaccaaaggaatgaacaagatgacgaagaa
aatgatgaggaggaagctgaagctgactcggattcagattctgactttgaaatgacaaag
aagccacgttataggcatcggctcttgaggcataaactctcaatgagtgatggtgaatct
ggaaatgaaaagaaagtcaaagtcaaagatggagcaaaggagggcacgcgcaagaacaga
aggaaagtaagtagtaatgaaggtactactgaagaagagagtgactctgattttcaggaa
tctcaatgtagtgaagaggaaagtgattctgatgataaacggaaacgtccaaggacaaga
gcatcgaaaaaagaggcagaggaaagccagcgcagctacttgctgaaaaagaaaagaagg
cgaattaaagttcaggaaaactcatcaagtgaaaagagcaactcagaatctggtgataaa
agtaatagtgatgatgaagaaaatgaagatgatataaaatcccctgcaaaaggtcggaag
aagataaggaagattttgaaagatgtcaatttgcgaacggagactcaaaatgccttaaaa
gaagaggaagatagaagaaagcgcattgctgatagagaaaaagagagggagaggttgaga
gagcaggtagaagtattggaaggtgcatcacctatacagtgtccaataaccactaaactg
atccttgatgaagataaggagacaaaagaatgccttgtccaagtccatagaaatttggtg
cgaaaactgaaaccccatcaagtggacggtgtacagtttatgtgggactgttgctgtgag
tcagtgagcaaggccttaaaagagctgggctcagggtgcatattggcacattgcatggga
cttggaaagacattgcaggtcgtgacctttttgcatactgtgctgttagctgagaaactt
gaattcagaactgctttaatcgtttgcccacttaatactgtgttgaattggatcaatgaa
ttttcaaaatggcaggaaggactggatgatgatgaatgcttggaggttaatgaattagcg
acagttaagcgtcctcaggagagagcctaccttcttgaaagatgggtggaggatggaggt
ataatgattctaggttatgaaatgtatcgaaatcttgcacaaggcagaaatgtaaaaagc
aggaagatgaaagaaatgttccagaagactttagtaaaccctggtccagacttcgtcatt
tgtgatgaaggacatgtacttaagaatgaagcttcagcaatatcaaaagcaatgaattct
atccgaacaaaaaggaggattattcttacagggacaccattacaaaataatcttgttgaa
tatcactgtatggtgaacttcattaaagagaatcttcttggctcaataaaggaattcagg
aacagatttatgaatcccattcagaatggacaatgtgcagattcaactttagtggatgta
agagtaatgaagaaacgtgcccacatcttgtatgaaatgttggcaggttgtgtgcaacgc
aaagattatactgcacttacaaaattcttgcctccaaaacatgagtatgttcttgctgtg
agaatgatgccacttcagtgcaaactttatcagtactaccttgaccacttcacaggtgta
ggaactagtactgaaggtggaaggggtagagccggaacaagactctttcaagattttcag
gtgttgagtaggatatggacccacccttggtgtcttcagttggactacatcagtaaagaa
aacaagggatactttgatgaagacagtatggatgaattcattgcatcagatacagatgag
acctcaatgagtctttcctctgaagatgagaaaagtaaaaagaagaaaaagcgtggaaag
aaaaatgaaagcagctctaaggagagtggcagtgacaatgaagtagaggtgatcaaggtc
tggaattcaagatcacgtggtggaggagaaggaagtatggaagagaaacctgtagagtct
gctgtaaaagcagatgatgcaaagccttccactggttccaatccaggtagtccttcagct
gactggtacaaagaattcattacagacgctgatgcggagctagttcaccattctgggaaa
atggccatcttatttgaaattctatatatgtcagaagcaattggggaaaaagtacttgtc
ttcagtcagtcactgatttcactggatttaatagaagattttctggagatggcaaataga
gaaaaaacagatggcaaatctgatatttataaaggtgatgggaagtggtacagaaacatc
gattactatcggatggatggatccacaagtgcacaaacaaggaaaaagtgggctgaagag
ttcaatgatgtaacaaatgtcagaggccgtctattcatcatttccacaaaagctggttca
ctggggattaatcttgtggctgccaaccgtgtcataatttttgatgcctcttggaatcca
tcttacgatatccagagcatctttcgtgtgtatcgttttggacagataaagcccgtcttt
gtgtacagattcttggctcagggaaccatggaggaaaagatttatgatcgtcaagtaaca
aaacagtcactttcattccgtgtagtcgaccagcaacagattgaacgtcacttcacaatg
aatgagttgactgaactctacacctttgaaccagatcagctagatgatccaaactctgaa
aagaagaagaaaagagatactcctgttttgcccaaggatcatattttggcagaaatactt
caaaataggaaagactaccttgtgggttatcatgaacatgactcacttctggaccacaag
gaggaggaagaactgagtgaggaggaccgtaaagcagcatgggctgaatatgaagcagaa
aagaagggtctctccttacgaactaatatcgcaactgggactaatttccctggtgccaat
ttcagcttgcaagctacacattttcctttcaacatagcaactttatccgcaatgagtaat
caacagctggaggatcttatcaaccaaggcagagagaaggtagttgaagccagttctagt
atagcaggtgtgagagcagaggctcttgaggacctcattgcacaagtgtggaaggagaat
cccaacctgactgaagaacaggttcaagcagtgtcactcacaaagcaagcaacccaagag
ttggaaataaaacgtcgagaagctatgtacaatgatatcctttcaaagcagcagctgcta
atacgttcagtgcaacagatattaatgagccgacggcagcagcagatcaaccagatggca
caacagcagcagcaacagtatccaatgacaccacttttaaaccagtttctgtcttcaaga
aaccctggcccgatacttggttatccacacttgggtttaagaggactgtctatgtaccca
caaactgcgcctggcatacggccacctcctttacagagagcaccacctgcacccatgcag
atgaaggggcagtctcctggccccccacaactgaaacaaggaataaaaaattcaaagaaa
tag
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integrated database retrieval system
