Hemitrygon akajei (red stingray): 140734417
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Entry
140734417 CDS
T11019
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140734417 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140734417 (dkc1)
03032 DNA replication proteins [BR:
haka03032
]
140734417 (dkc1)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
140734417 (dkc1)
Prokaryotic type
140734417 (dkc1)
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
140734417 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
140734417
NCBI-ProteinID:
XP_072914429
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All DBs
Position
10:55707980..55728356
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AA seq
542 aa
AA seq
DB search
MADGDASVKKQKKHKKKSEQSIGDIQQETDFLIAPESKVVKLDTSHWPLLLKNFDKLNVR
TAHYTPIPSGASPLKREITEYIRSGFINLDKPANPSSHEVVAWIRRILRVEKTGHSGTLD
PKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIESELQLSRGLEMLTGALFQRPP
LIAAVKRQLRVRTIYDSKLIEYDPERRLGVFWVSCEAGTYIRTLCVHIGLLLGVGGQMQE
LRRVRSGVNGEKDNMVTMHDVLDAQWQYDHNKDETYLRRVIMPLEKLMVTHKRLVMKDSA
VNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGVVAK
IKRVIMERDTYPRKWGLGPKACEKKMMIKQGLLDKHGKPNGSTPELWKKSYVDYITGNQA
PSSVEASNVTQSQAVKRKRESESESDESVPSTPAKPKSPTELSKKEKKKKKKEKKQKLLE
EAEIKTEKIDPVPTSEAQEFIPEVKKEKKKKKEMEIGEPVTEETESSKKKKKKKEKAATC
DY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggtgatgcatctgttaagaaacaaaagaaacacaaaaagaaatctgaacaa
agtattggggacatccagcaggagactgattttctgatcgcaccagaatcaaaggtggtg
aagttagatacgtctcattggcctttgttgctgaagaattttgacaagcttaatgtaagg
acagctcactacacgcctattccaagtggcgcttcgcctctcaagagggaaatcactgaa
tatatacggtctggattcattaacctcgataagccagcaaacccatcctcacatgaagtg
gtggcatggatacgcaggattctgcgggtggaaaagaccggtcacagtggaacgctggat
cctaaagttacgggctgtctaattgtgtgcatagaacgagcaactcgactagttaaatcc
caacagagtgctggcaaagagtatgtgggaatagttcggctgcacaatgctattgaaagt
gaactccagcttagtcggggcttggagatgctgacaggagctttattccaacgtcctccc
ttgattgctgctgttaaaagacagttaagagtccggaccatctatgacagcaaattaatc
gagtatgatccagagaggcggctgggagtcttctgggtgagctgtgaagcaggaacgtat
atccgaacattgtgtgtacatattggactgttacttggtgttggtggtcagatgcaggag
ctgcgacgggtacgatcaggagtaaatggagagaaggataacatggtaacaatgcatgac
gtgttggatgcccagtggcaatatgaccacaacaaggacgagacctatttacgtcgagtc
atcatgccccttgaaaagttgatggtgacccacaagcgtttagttatgaaggatagtgcg
gtaaatgctatctgttacggtgctaagatcatgctccctggtctgctaaggtatgaagat
gggattgaggtgaaccaggaaatcgttgttattacgacaaagggagaagcaatttgcatg
gctattgctttaatgacaacggcggtgatatctacatgtgaccatggtgtggtggcaaag
ataaagcgtgttatcatggagcgggacacgtacccacgtaagtggggcctggggccgaag
gcatgtgaaaagaaaatgatgatcaaacagggtttgctagataagcacggcaagccaaat
ggaagtactcctgagttgtggaagaagagctatgtagattacattactggaaatcaagca
cctagcagtgtagaagctagcaatgtgacacaaagtcaggcagtgaagcgaaagagagag
agtgaaagtgagagtgatgaatcagtgccgtctacccctgcgaagccaaaatccccaaca
gagctaagtaagaaagaaaaaaagaaaaagaagaaagagaagaagcaaaagttacttgag
gaagcagagataaaaactgaaaaaattgatccagtacctacatcagaggcacaagagttc
attccagaggtcaagaaagaaaagaaaaagaagaaagaaatggaaattggagagcctgtc
actgaagagactgaaagctccaaaaagaagaaaaagaaaaaagaaaaagctgcaacatgc
gattactga
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