Hemitrygon akajei (red stingray): 140734419
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Entry
140734419 CDS
T11019
Symbol
brcc3
Name
(RefSeq) lys-63-specific deubiquitinase
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03440
Homologous recombination
haka04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140734419 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
140734419 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
haka01002
]
140734419 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140734419 (brcc3)
03036 Chromosome and associated proteins [BR:
haka03036
]
140734419 (brcc3)
03400 DNA repair and recombination proteins [BR:
haka03400
]
140734419 (brcc3)
Peptidases and inhibitors [BR:
haka01002
]
Metallo peptidases
Family M67
140734419 (brcc3)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
140734419 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
140734419 (brcc3)
BRISC complex
140734419 (brcc3)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
140734419 (brcc3)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
140734419 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
Retinal
Motif
Other DBs
NCBI-GeneID:
140734419
NCBI-ProteinID:
XP_072914431
LinkDB
All DBs
Position
10:complement(55988723..56014374)
Genome browser
AA seq
261 aa
AA seq
DB search
MAVCGVHLDSDAFLVCLNHALSTEKEEVMGLCIGEVDTSRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLADMTGHPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSIQAQKGSEYERIEIPIHVVPHETIGKVCLESAVEL
PKILCQEEQDAYRRIHSLTHLDPITKIHNGSVFTKNLCSQMSSISGPLLQWLEDRLDQNK
QHILELQREKEQLLQELAALK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgtggggttcacctggactctgatgccttcctcgtatgtttgaatcacgct
ctgtccacagaaaaagaggaagtgatgggcctctgtattggagaggttgacacaagcagg
attgttcacatacattctgttatcatcctccgtcgctcagataagcgcaaagatcgggtg
gaaatttctccagagcaactttctgcagcctctactgaagccgagagattagctgatatg
actggtcacccaatgagagtggtgggatggtatcattctcatccacatattactgtatgg
ccttcacatgtagatgtccgaacccaggccatgtaccagatgatggaccagggttttgtg
ggccttatcttttcctgtttcattgaagacaagaataccaagactggtcgagttctctac
acatgtttccagtcgattcaagcgcagaaaggttctgagtatgaacgaattgaaatccct
attcatgttgtaccacatgaaactattggcaaagtgtgcctggagtctgctgtggaactt
ccaaaaattctttgtcaggaagagcaggatgcttatagaagaattcacagtttgacacat
ctggacccaattaccaagattcacaatggatcagttttcacaaagaatctgtgcagccag
atgtcatccattagtggtcctctgctacagtggctggaggatcgtttagatcagaacaaa
cagcacatcctggaacttcagcgggaaaaagaacagctcctccaggaattagcagcccta
aaatga
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