Hemitrygon akajei (red stingray): 140734618
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Entry
140734618 CDS
T11019
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140734618 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
haka03037
]
140734618 (poc1b)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
140734618 (poc1b)
Cilium and associated proteins [BR:
haka03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
140734618 (poc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
CFAP251_N
DSE1_N
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Vps41
ASA1
eIF2A
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_HPS5
PAC11
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
BCAS3_WD40
Tricorn_2nd
RMC1_N
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
PD40
Beta-prop_VPS8
Beta-prop_ACSF4
Tricorn_N
Cytochrom_D1
DUF4908
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
140734618
NCBI-ProteinID:
XP_072914936
LinkDB
All DBs
Position
10:complement(118470679..118576948)
Genome browser
AA seq
474 aa
AA seq
DB search
MASALEDPTLEHSFKGHKDVITSVDFNPNNKQLATTSFDQHLMIWNLKPQTRAYRFTGHK
DAVMCAQFSPSGHLVASASRDKTVRLWTPNIKGASTAFTAHSATVRSVNFSSDGNFLVTA
ADDKSVKVWNAHQQRFLLSFKEHNNWVRCARFSPDGRLIVSCSDDRTVKIWDTASRECIN
TFSNHGGFANFVDFNPSGTCVASAGTDNTVQLWDVRINKLLQHYQVHSASVNCLSFHPSG
NYLITASSDCTLKIMDLLEGRLFYTLHGHQGPVMAVTFSRQGEYFASGGTDSQVLVWKTN
FDSIPYNEVLKHNIVRTNPEAPPHITDIHPRIPHRHNPRSQTIQINPRTDVADLQTSDPV
VMDAGRGFVPDPRSRPVETNWGSLLTNQVNRSIDAPLPANSYRLDPVNNEPTACSQRDHT
GIPSELTETLGRIVEQLDVLTQTVSILEQRLTLTEDKLQECLDNQSTTLQERPP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgccctggaggatccaaccttagaacacagctttaaaggtcataaagatgtc
atcacaagtgttgattttaacccaaacaacaagcagcttgcaactacctcatttgatcag
caccttatgatatggaacttgaagcctcagacaagagcctaccgatttacaggacacaaa
gatgctgtgatgtgtgcccagttctctccatcaggtcacctggtggcatctgcttcacgg
gataagactgttagactctggactccaaatatcaaaggggcatcaacagcattcacagcc
cacagtgccacagttcgcagtgtgaatttctccagcgatggtaatttcctggttacagca
gctgacgacaaatcagtgaaggtgtggaacgctcatcagcagcggtttttgttgtccttt
aaagaacacaataactgggtgcgctgtgctaggttctcaccagatggaaggcttatagtt
tcctgtagtgatgacagaactgttaagatctgggacacagcgagtagagagtgtatcaat
actttcagtaatcatggggggtttgccaactttgtagattttaaccccagtgggacctgt
gtagcttcagcaggaaccgataatactgtgcaactttgggatgtccgtataaacaaactg
ctgcaacactatcaggtccacagtgcttcagtgaactgcttatctttccatccttctggc
aactaccttattactgcatctagtgactgtactctcaagataatggacttgttggaagga
cgattattttatactctccatggacaccagggtcctgtaatggcagtgacattttccagg
caaggcgaatattttgcttctggtggaactgattcacaggtattggtgtggaagacaaat
tttgatagtattccatacaatgaagtcttgaaacataatattgtgcgaacaaatcctgaa
gcccctccacacattactgatattcacccaagaattcctcaccggcataatcccagatct
caaacgatacagattaatcccaggaccgatgtagctgacttgcaaacatctgatccagtg
gtgatggacgctgggagaggttttgtccctgatccccggtcaagaccggtggaaacaaac
tggggctcacttttaaccaaccaggtgaacagatccattgatgcccctttgccagccaac
tcctaccggctggacccagttaacaatgaacccacagcctgctctcaaagagatcacacg
ggtatcccatcagaacttaccgaaacattggggcgcattgtggagcaactggacgtttta
acccagactgtgtcgatcttagagcagcgtttaacattaactgaagataagctacaggag
tgcctggataaccaaagcactacgctgcaagaaagaccaccctag
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