Hemitrygon akajei (red stingray): 140734686
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Entry
140734686 CDS
T11019
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
haka01001
]
140734686
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140734686
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140734686
Protein kinases [BR:
haka01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
140734686
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140734686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
zf-RING_UBOX
PHD
zf-C3HC4
PHD-1st_NSD
zf-RING_2
zf-C3HC4_2
zf-RING_5
Spectrin
DUF1759
Motif
Other DBs
NCBI-GeneID:
140734686
NCBI-ProteinID:
XP_072915084
LinkDB
All DBs
Position
10:complement(132570687..132741684)
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AA seq
1008 aa
AA seq
DB search
MAESPQEPGLNTGNEAESREQGDKAEGAQLNLLETCAVCKQNFQSRDPKLLPCLHSFCKK
CLPEPQRHLVLQGSGSLADSSLQQQQQQHQQIGVIRCPVCHQECRQPDIIDNYFVKDTTE
VPSSTDEKFNQVCTSCEDNAEANGFCVECLEWLCKTCIEAHQRVKFTKDHTVRQKEDVSP
EAVSVSNQRMLFCPVHRQEQLKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFNNQKVII
DTLTAKLQEKRNYIQYTASQIQNRINEVNENCKKVEQDIKVAVFTLMIEINKKGKALLQQ
LESVTKDRQAKLLQQQLEISGLSKQVEHVMNFAKWAISNRSSIALLYSKRLITFQLRYIL
RARCDASPVATSSVRFHCDPTFWAKNVLNLGSLVLDKSPVPSSSGPNVPTGPSLQPQDNN
TGKVQGQINLAQLRLQHMQQQAMAQRIQQRMHQMRPILPGAQQPRSQGPTLAQQQPPLSP
SNQSLQPPRLISLQSLQRGNPGAPVPAAQQSRMPPGNASKMTSPQQQSGPQHHVTTSPLL
RQLDDAGTVLLESLLVREKNGNCMPTRPLATSSNPSPAPSMPSPGHTGPIPAVVCKELVR
DRMGFLQVLQFPPTFQRCTGSVTVTSVHPSGYTSSSSSTGSRGSCTSSSRLSKPELQQMT
PTIRLESIKVKQEPMAEDDLCDFPIIVVKQEPGEEVTEPGLLVNQQNNAAALPHNKLAMD
RRMGTQQDSMTKGDPPDSTASPSSNTTPPQDRQTQPCGASHKPARAGAENSKEDDPNEDW
CAVCQNGGDLLCCEKCPKVFHLVCHVPTLLAFPSGEWICTFCRDPMNPEVVYDCDEQWQA
GEKRKGGGAPEMPPVDQRKCENLLLSMYCDEMSVAFQEPVPASVVPDYYKIIKKPMDMCT
VKIKLQRQHAQHYQRAEDFVADIRLIFRNCEEFNEPDSEVAHAGRALEQYFETRLLTLFP
DRLFPPLPLSKSDSERTKANLDSDEDDEDVVQPRRKRCKGRESPIFIK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagcccgcaggagcccgggctgaacacaggaaacgaagcggagagcagggaa
caaggcgacaaggcggagggagcccagctcaacctgctggagacgtgcgccgtctgcaag
cagaatttccaaagtcgagatcccaaactgctgccatgtttgcactccttctgcaagaag
tgtctgcccgagcctcagaggcacttggtgctgcagggctccggcagcctggccgactcc
tctctccagcagcagcagcagcagcaccagcagattggtgtgatccgttgcccagtctgt
caccaagaatgccgacagcctgatattatagacaactacttcgtgaaggacacaacagaa
gtgccaagtagcacagatgaaaaattcaaccaggtctgcacaagctgcgaggacaatgct
gaagccaatggtttttgtgtcgagtgtcttgagtggctttgtaaaacctgcatcgaggct
caccagagagtcaagtttacaaaagaccacaccgtgagacagaaggaggacgtgtctcca
gaggcggtcagtgtgtccaaccagaggatgctcttctgccccgttcacagacaggagcag
cttaagcttttctgtgagacctgcgatcggctgacgtgccgggactgccagctgttggaa
cacaaggagcacaggtaccagtttctagaagaggccttcaacaatcagaaggtcatcatc
gatacactgacagccaaactgcaggagaagagaaactatatccagtacacggccagtcag
atccagaacaggattaatgaagtaaatgaaaactgtaagaaagttgagcaggacatcaaa
gtggccgtcttcacactaatgatcgagatcaacaagaaagggaaagctttgttgcaacag
ctggagagtgtaaccaaagaccgccaagcaaaacttctccaacagcaacttgagatctct
gggctctcgaagcaagtggagcatgtcatgaactttgcaaaatgggctatctccaacaga
agcagcatagccctgctgtatagcaaacgactgatcacctttcagctgaggtacattctt
cgggctcgatgtgatgcctccccggtggctaccagctctgtccggtttcactgtgaccca
accttctgggccaaaaacgttctcaatttgggttccctggtcttggataagagtccagtt
ccatccagcagtggtcctaatgtgccaacgggaccaagcctgcagccccaggacaataac
acgggcaaggttcaagggcagattaacctggcccagttgcgcctgcagcacatgcagcag
caagccatggctcagagaattcagcagcgcatgcaccagatgagacccatcttaccaggt
gcccagcagcccaggtctcagggcccaaccctggctcagcaacagccacctctgtctcct
agcaaccagtccctgcagccacctcgcctcatcagtctacagagcctgcaacggggtaat
ccgggcgctccagtcccagcagcacagcagagccgaatgccacctggcaatgccagcaag
atgaccagcccccagcagcagagcgggccacagcaccatgtgacgacaagccccctgctg
agacagctggacgatgcagggactgtactgctagaaagccttctggtcagagaaaagaac
ggcaactgcatgccaacaaggcccttggcaaccagctcaaacccttctccagctccttcc
atgccctcgcctggacatacaggtccaatccctgctgttgtttgtaaggagctcgtacgt
gaccgcatgggttttctccaggtgctccagtttcctcccacattccaaagatgtacaggg
tcagtgacggtcaccagtgtgcacccatctgggtacacttcaagcagctccagcactggc
agcagagggagttgtacctcatcgagcagactatcaaagcctgaacttcagcagatgaca
ccaaccattcgcctcgagtcgattaaagtcaagcaggaacccatggctgaagatgacttg
tgcgatttccccatcattgttgtgaagcaagagcctggggaggaggttactgagcctggc
ctgctagtgaaccagcagaacaacgccgcagctctcccacacaataagctggcgatggat
aggcggatggggactcagcaagacagcatgaccaaaggggaccctccagacagcacggcc
tccccttcttccaacaccaccccccctcaggacaggcagacccagccctgtggtgcctct
cacaagcccgcccgggcaggagctgagaacagtaaggaggatgatccaaatgaagactgg
tgcgctgtctgccagaatggaggtgacctgctctgttgtgaaaagtgccccaaagtcttc
caccttgtctgccatgtgccgactctccttgcctttccaagtggcgagtggatctgtaca
ttttgccgtgaccccatgaaccccgaggtggtgtatgactgtgacgagcagtggcaggcg
ggtgagaagcggaaagggggtggagctccagagatgcccccggttgatcagaggaaatgt
gagaacctgctgctctccatgtactgtgatgaaatgagtgttgcctttcaagaaccagtt
cccgcttcagttgttcctgactactacaagattataaagaaaccaatggacatgtgcact
gtgaagattaaactgcagcggcaacatgcacagcactatcagagagctgaggactttgtg
gcagatatcaggctcatcttcaggaactgtgaggaattcaatgagcctgattctgaagtc
gcccacgctggaagagccttggagcagtactttgagacaaggctcctgacactgtttccc
gataggttattcccaccgctgccgctctccaaatccgactctgagcgcacgaaggccaac
cttgattcagacgaggatgatgaagacgtcgttcagccccggagaaagcgttgcaaagga
agagagagccccatcttcatcaaatga
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