Hemitrygon akajei (red stingray): 140734998
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Entry
140734998 CDS
T11019
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03020
RNA polymerase
haka04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140734998 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
140734998 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140734998 (polr3b)
Enzymes [BR:
haka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140734998 (polr3b)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
140734998 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
140734998
NCBI-ProteinID:
XP_072915895
LinkDB
All DBs
Position
10:176327078..176475618
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AA seq
1137 aa
AA seq
DB search
MEAVAIDLLVAEFGELGPAALAAPVRAVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEI
KKIMKANEKVTSDADPMWYLKYLNIYVGVPDVEESFNVTRPVAPHECRLRDMTYSAPITV
DIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVE
KVILIQEQLSKNRIIVDADRKGTVGASVTSSTHEKKSRTNLVVKQGRYYLRHNTLSEDIP
IAIIFKAMGVESDQEIVQMIGTEDPVMSAFAPSLEECQKAQIFTQMQALKYIGNKVRRQR
MWGGPKKTKMEEARELLASTVLTHVPVKEFNFRAKCIYTAVMVRRVILAQGANKVDDRDY
YGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDIVKHMRQDQITNGMV
NAISTGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISSQFEKTRKVSGPRSLQPSQW
GMLCPSDTPEGEACGLVKNLALMTHITTDMEDAPIIKLAFNLGVEDVNLLCGEELSYPNV
FIVFLNGNILGVIRNHQKLVKTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPY
IIVRNGKPAVTNKHIDELSQGYRSFEDFLHEGLVEYLDVNEENDCYIALYEHMINTSTTH
LEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQ
KPMVKTKSIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAK
CTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENRQVLVNKSMPTVT
QTPLEGTAQSQQPQFRDVPITYKGATDSYIEKVMISSNSEDAFLIKILLRQTRRPEIGDK
FSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDG
RFHYGTAFGGSKVKDVCEDLIRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMV
LDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMMLLERLMISSDAFE
VDVCGLCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIVPRLKLARYNE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgtagccatcgacttgctggtagccgaattcggggagttgggccccgcggca
ctggcggcgcccgtccgagctgtcgaggaaaaatggaagttgctccctgctttcctgaag
gtcaaagggctggtaaagcagcacatcgattcattcaactactttataaatgtggagatt
aagaagattatgaaagccaatgagaaagtgaccagcgatgctgacccaatgtggtatctg
aagtatctgaatatttacgttggagttccagatgttgaagaaagtttcaatgtgacgcgg
cctgtggcgcctcatgagtgtcgcctgagggatatgacgtattccgcccccatcacagtg
gacattgaatacacccgaggaagccagcgaataatacgcaatgcgttgcccattggcagg
atgcctataatgctacgcagctcgaattgtgtacttacggggaaaactccagcagaattt
gcaaagctgaatgaatgtcctctggacccaggtggctatttcattgtgaaaggtgttgaa
aaggttattctcatccaggagcagctgtcaaagaacagaataattgtggatgctgacagg
aagggtactgttggtgcttctgtgacaagctccacgcacgagaagaaaagtagaaccaac
ttggtggtgaagcagggtcgctactatctgcggcacaacactctgtcagaggacatcccc
atcgccatcatattcaaggccatgggggtggagagtgatcaggagattgtacagatgatt
gggacagaggaccccgtgatgtccgccttcgctccgagtttggaagagtgtcagaaagct
cagatcttcacacagatgcaggcactgaagtacatcgggaataaagtgcgcaggcagaga
atgtggggaggaccgaagaagaccaagatggaggaggcccgggaactacttgcatcgact
gtgctcacccatgtgccagttaaagaattcaacttccgtgccaagtgtatctacaccgca
gttatggttcggagggtgattttagcacaaggagccaacaaagtagacgacagggattat
tatggtaacaagcgtctggagctggctggacagctcctctccttactctttgaagatctg
ttcaagaaattcaactctgagctgaagaaaattgcagatcagatcattcccaaacagcga
gctgcccagtttgacattgtcaagcacatgcgccaggatcagatcactaatggcatggtt
aacgccatctcaacaggaaactggtctctgaagaggtttaagatggatcgtcagggggtg
actcaggtattatcacgtttgtcctacatcgctgccttgggtatgatgaccaggatctcc
tcacaatttgagaagaccaggaaagtgagtggtcccaggtccctgcagccatcacagtgg
ggcatgctgtgtccgtcagacactcctgaaggagaggcttgtggtttggtgaagaatttg
gctctgatgacacacatcaccacagacatggaggatgctcctattattaaacttgccttc
aatcttggtgttgaagatgtcaatctgctttgtggggaagaactttcatatccaaatgtt
ttcattgtgtttctcaatggtaacatcctgggtgtaatacgcaatcaccagaagctggtg
aaaacattccggctgatgcggcgagcaggttacatcaacgagtttgtctccatctctacc
aatctgacggaccgctgcgtgtatatttcctcagacggaggcagactttgcagaccgtac
atcattgtgaggaatggaaaaccagccgtgacgaacaagcacattgacgagctctctcag
ggatacagatcatttgaagattttctgcacgagggattggtggagtaccttgatgtcaat
gaagaaaatgactgttacattgcactttatgagcacatgatcaatacgtcaacaacccac
ctggagattgaaccatttacactcctcggagtatgtgctggcctcattccctaccctcac
cacaaccagtctccaaggaacacttaccagtgtgccatgggcaagcaggccatgggtacc
atcggctacaaccagcgtaatcggattgacactctcatgtacctgctcgcctatcctcag
aaacccatggtgaagaccaaatccatcgaactgatagattttgagaagttaccagctggg
caaaatgctacagttgcagtgatgagctacagtggttatgacattgaagatgcccttgtg
ttaaataaggcttctttggacagaggctttggaagatgcctcgtgtataaaaatgcaaag
tgtacccttaaacgttacaccaatcaaactttcgacaaagtcatgggtccaatgcttgat
gcggccacacgaaagcccatttggcggcatgaaattttagatgctgacggtatttgttca
ccaggtgagaaagtggaaaacagacaagtgttggtgaacaagtcgatgccgacagttaca
cagacgccactagagggaacagcacagtcccagcagccacagttccgtgacgtcccaatc
acttacaaaggagcaacggactcatatattgagaaggtgatgatttcttcaaactccgaa
gatgcattcttaattaaaattctcttgaggcaaacgaggcgtcctgagattggtgacaaa
ttcagcagtcgacacggacaaaaaggtgtctgtggcttaattgtacctcaggaagacatg
ccgttctgtgacagtggaatctgccctgatatcatcatgaaccctcatggttacccctca
cgaatgacggtcgggaagttgattgagttgctggcaggcaaagccggcgtccttgatggc
aggttccattatggtactgctttcggagggagcaaagtgaaggatgtgtgtgaggatctg
attcgttacggctacaactatctgggcaaggattatgtcacctccggaatcactggagag
cctttggaagcgtacatctactttggtcctgtgtattaccagaagctgaagcacatggtc
ctcgacaagatgcacgctcgagcccgaggtcctcgggctgttctcacccggcagccgaca
gaaggacgctctcgtgatggaggtttgcgtctaggtgagatggagcgggattgtctgatc
ggctatggtgccagcatgatgctgctggaaaggttaatgatctccagtgacgcatttgaa
gtggacgtctgtggactatgtggactgctcgggtattcgggttggtgtcattattgcaaa
tcttcctgtcacgtctcgtctctgcgaatcccatacgcctgtaagctgctgttccaagag
cttcaatccatgaacattgttcccaggctgaagctggccaggtacaacgagtga
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