Hemitrygon akajei (red stingray): 140735218
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Entry
140735218 CDS
T11019
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140735218 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haka02000
]
140735218 (abca3b)
Transporters [BR:
haka02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
140735218 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
RsgA_GTPase
DUF4162
AAA_23
AAA_29
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
140735218
NCBI-ProteinID:
XP_072916111
LinkDB
All DBs
Position
11:1898725..2105866
Genome browser
AA seq
1700 aa
AA seq
DB search
MSRLRQLGLLLWKNYVLQKRQVLVTITEISLPLLFTTILIVLRQRVVSIQYPNATVYPPF
NINDIPYFPQHPFAQWYVAYIPSNVTAVETIAMTVKDSLHRVVEVLGFHTEAQFEEFIKS
GSKLTQSVLTALVFDHDFKHPEERLPLQVKYHLRFKYSPWNAPLEEHSSFNPSEDRNWHT
EYLFPLFQLPGPRERYYKDGGTPGYYREGFLAAQHATDKAIIRYHTGRVGAELLSLVSVQ
MLRFPYPPYIDDVFILAIQTQLSLVVMLSFTYTALNITKAIVLEKETRQKEYMKMMGLNN
WLHWAAWFLKFLLFLLISAFLMTLLLCVKLRNQRAVLQHSDPTLVFSFLMLFAISTISFS
FMISVFFNKANTAAAVSGFLYFLTYVPYLFIVPRYHMMTFAQKVASCLFSNVAMALSCQL
IGMFEGKGTGIQWVNINQPVNVDDSFTLSDAMGVLIIDSILYSLVTWYVEAVFPGEYGIP
EVWYFFLLPSYWLKSPKSTYIKVNSEEEDPEAFQNNEYIEDDQSDLEAGIIIKDLTKVFH
ADNQTKVAVSHLTVNLYKGQISVLLGHNGAGKSTALSVLTGLFPPTSGTAYINGFNICKD
MALVRQSLGLCPQHDILFDSLTVKEHLSFFCRLKGYSSEKVQDAVNQMLMMLNFVEKQDT
PVKILSGGMKRKLSIAIALIGDSKVVILDEPTSGMDPLSRRATWDLLQQVKGSRTILLTT
HFMDEADLLGDRILIMARGQVQCCGSPLFLKSLYGAGYRMVIVKEPHCNTVNINRLVQSF
VPGATQQTNVGAELSFLLPNEYTVRFEALFSELEQRREELGIASYGASVTTMEEVFLRVG
KLVDTSMDQAIQLPPLQYQHERRVSDWSVRETASLDGPMSNLRSTEQSQPLDLATVKRNT
GVRFFLQQFYAMFLKRATYSWRNWKVITGQFMIPLIFASCALIVAKTFPGPKDSPPLNLT
LQKYGSSIVPYSVDGNSSLAVQLAQMYEGLLPEQLAKPKHVKGDLINYLLSDSVKKGSTL
NAEILVSASFQSTRSGVRIEALFNNLAFHTPATSLMLVDNALFKMLAGPEASISTTNYPQ
PRNVTEEAMDQLNENQTGFALSFNLMYGMAFLASTFSLLLVSERSLRSKHMQLLSTVHVV
SFWLSALLWDLVNYLIPCWAILMIFQVAGLQPFTFQEKLVDILLLLVLHGWSIIPLMYLT
HYLFSSTATVYTTVTIANILSGTASFVAVTIMDIPELGLMSLSKVLDSVFLVLPNYCLGH
GLSEFYQNYLLIGVCTSSPVAEYLCAKFNITYQMNYFSWEHPGIGRIIAALATQGLAFVA
LLFLVEFNVFRTLSSCIHRTFWRKKLALIIDVMAPHAVEDYDVTVERMKIEESPAIQLDK
PLVLKELSKVYPGKESTIAVNRISLAVSRGECFGLLGLNGAGKTTTFKILTGDVNMSGGD
AFIEGRSILNGKKEVWQKIGYCPQFDGLLEHMTGRETLCLYARLRGIPELLLKQCVDDVL
RSLLLEPYARRQVRTYSGGNKRKLSAGVAMIGNPNIIFMDEPSTGMDPISRRLLWDVVKQ
HLEMGKSVVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLVKIQGDH
SNLRTFKDFIESTFEGSLIKDEHQGMLHYHLTSKRLTWAQILGTLEGAREKYSIKNYSVS
QISLEQVFLGFAQFQTHRDQ
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacttcggcagcttggactactgctctggaaaaactacgtattacaaaaacgg
caagtgttggtcaccattactgaaataagcctgccgcttttattcactacaatccttatc
gttctaagacaacgcgttgtgtccatccagtatcccaatgcaacagtatatccccccttt
aacattaatgacatcccgtacttcccacaacatccttttgcccagtggtatgtggcttac
attccttccaatgtgacggcagtagagacaattgccatgacagtgaaagacagtctgcac
agggtggttgaagttctgggtttccacacagaagctcagtttgaagaatttataaaatct
ggaagtaagttgacacagagtgtgttgacagccttagtgtttgaccatgacttcaagcac
cctgaggagcgtttaccactacaggtgaagtaccacctcagatttaaatacagtccttgg
aatgcacctcttgaggaacacagctctttcaatcccagtgaggatcgaaactggcacaca
gagtacctcttcccgttgttccagttgccagggcctcgggagaggtactacaaggatgga
ggcactccaggctactatcgcgagggtttcctggctgcccagcatgcgacagacaaagcc
attatcaggtaccacactggccgtgttggggctgagctcctgagcttggtgtcagtgcag
atgctgcggttcccttacccgccctacatcgatgatgtcttcattctggcaatccagacc
cagctctcactggttgtcatgttgagcttcacctacacggcactcaacatcaccaaagcc
attgtgctggagaaggagactaggcagaaggaatacatgaagatgatggggctgaataac
tggctgcactgggcggcttggttcctcaagttcctcctgttccttctgatttcagctttc
ctcatgaccctgctgctttgtgtaaagctccggaatcagagggcagtcctgcagcacagc
gaccccacactggtcttttccttcctgatgctgtttgccatttcgaccatttccttcagc
ttcatgatcagcgtcttcttcaacaaagccaacacagcagcagcggtcagtggattcctg
tacttcctaacctacgtcccctatcttttcattgtaccacgttatcacatgatgaccttc
gcacagaaagtggcgtcctgtttattctccaatgtggcaatggcattgagctgccagtta
attggcatgttcgaaggcaaaggaacgggtatccagtgggtgaacattaaccagccagtg
aacgtggatgacagtttcaccctttctgatgcgatgggtgtgttgatcattgactctatc
ttgtatagtttggtcacttggtatgtggaggccgtgttcccgggggaatatggaatacca
gaagtctggtactttttcttattgccctcttactggctcaagtcaccaaaatccacctac
atcaaggtcaacagtgaggaagaggatccagaggccttccagaacaatgaatacattgag
gatgaccagtctgacctagaggctgggatcataatcaaagacttaaccaaggtgtttcat
gctgataatcagacaaaggtggccgtttcccatctcactgtgaacctgtacaagggacag
atctcggttctgttgggtcacaacggggcagggaagagcaccgccctgtctgtgctcaca
ggcctctttcctcctacaagcggtacggcctacattaatgggttcaacatctgcaaggac
atggcactggtacgccagagcctgggcctgtgcccacagcatgatattctgtttgacagc
ctgactgtcaaggaacacctctccttcttctgcaggctgaaaggctacagttcagagaag
gtgcaggatgcggtaaaccaaatgttaatgatgctgaactttgtggagaagcaggacacc
cctgtgaagattctatctggtgggatgaaacgcaagctctccattgcgattgctctcatt
ggagattcaaaggttgtcatattggatgagcccacatcaggcatggaccctctgtcccgc
agagccacctgggacctcctacagcaggtgaagggcagccgcaccatcctgctgaccacc
cacttcatggatgaagctgatctcctgggggaccgcatcctgatcatggccagggggcag
gtccagtgctgtgggtctcctctcttcctcaagagcctgtacggagccggataccgcatg
gtgatcgtcaaggagcctcactgtaacaccgtaaacatcaaccgtctcgtccagagcttt
gtccccggggctacccagcagaccaatgttggtgcagagctctcctttctcctcccgaat
gaatacactgtcaggtttgaagccctcttttcggaactggagcaaagacgggaggaactg
ggaattgcaagttatggcgcctccgtcacaaccatggaggaggtgttcctgagggtgggc
aagctggtggacaccagcatggaccaggctattcagcttccgccgctgcagtatcagcat
gaacgcagggtgagtgactggtccgtcagggagaccgccagtctggatggcccaatgagc
aacctcaggagcactgagcaaagtcaacccctcgacctcgccaccgtcaaacgcaacacc
ggggtgagattcttcttgcagcagttttatgctatgttcctgaagcgagccacctacagc
tggcggaactggaaggtgatcactggccagtttatgatcccgcttattttcgctagctgt
gcactgattgtagccaagacatttccaggacccaaggactcgccacctctaaacctgact
ctccagaagtacggttccagcattgtcccctactctgtggatggtaactccagcctggca
gtgcaactggcccagatgtatgaggggctgctcccagaacagcttgcaaagcccaagcat
gtcaaaggtgatcttataaactatctgctcagtgactctgtgaagaaaggatcaacgctt
aacgcggagattttagtgagtgcttctttccaaagcaccagatcaggtgttaggattgaa
gctttgtttaataacctggccttccacactcctgcaacctcactgatgctggtggacaat
gccctgttcaagatgctggcggggccagaagcatcgatcagcaccaccaactacccccag
ccccgcaacgttacagaggaagcaatggaccagctgaatgagaatcagactggctttgct
ctgtcctttaacctgatgtatggaatggccttcctagccagcaccttctccctcttgctg
gtgtcggagcgaagcctgagatccaagcatatgcaattgcttagtaccgtccacgttgtc
agcttctggctgtcggcactcctctgggacctcgtgaactatctcatcccctgttgggca
atcctgatgatattccaggtggcagggctgcagccgttcactttccaggagaaacttgtt
gacattttactcctgcttgtgctccatggctggtctatcatccccctcatgtacctcact
cattacctcttcagcagcaccgccacagtgtacacaacggtcaccatcgccaacatcctg
tccggcacagcctcctttgttgccgtgacaatcatggacatcccagagcttggcctgatg
agcctatcgaaggttctggactctgtgttcttggttttacccaattactgccttgggcat
ggcttaagcgagttttaccagaactacctgctgatcggggtgtgtaccagcagcccagtt
gccgagtatctgtgtgcgaagttcaacattacctaccaaatgaattacttttcctgggag
catccaggcattggccggatcattgctgccctggcaacccaaggattggcattcgtggct
cttcttttccttgttgagttcaatgttttcagaactttgtccagttgtatccatcgtacc
ttctggaggaagaagctggctctgattatagatgtcatggccccgcatgctgtggaagac
tatgatgttacggtggagcgcatgaagatagaggaatcaccagccatacagctggacaaa
cctctggtgttaaaggagctctccaaggtctaccccgggaaggagtccacgatcgctgtg
aacaggattagtttggccgtgagcaggggcgagtgttttggattgctggggttaaatgga
gctggaaaaacaaccaccttcaaaattctaacaggtgacgtgaacatgagtgggggagac
gcatttattgaaggtcggagcattctgaatggtaaaaaggaggtgtggcagaaaattgga
tattgtccgcagttcgatggcctcctggagcacatgacgggaagagagacattgtgcctc
tacgctcgtctccgcggcattcctgagctgctcctcaagcagtgcgtggacgatgtactc
cggagcctcctactcgaaccctacgcgcggaggcaggttcggacgtacagcggtgggaac
aagcggaagttgagcgctggagtggcaatgattgggaatccaaacattattttcatggac
gagccatctactggcatggaccccatctcccggaggctgttgtgggatgtggtgaagcag
catctcgagatgggcaagtctgtagtgatcacttcccacagtatggaggaatgtgaggca
ctctgtacccggctggcagtgatggtcaatggccagttcaaatgtcttggcagccctcag
catctgaagagtaaatttggcagcggatacacactactggtcaaaatccagggggaccat
tccaatctccggactttcaaggacttcattgagtctacgttcgaaggtagcctcatcaag
gacgagcaccaggggatgctgcactatcacctgactagcaaacggctcacttgggcacag
atcctcggcacgttggaaggagctcgggagaagtacagcatcaagaattactcagtcagc
cagatctccctggagcaggtatttcttggctttgcccaattccaaacccacagagaccag
tga
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integrated database retrieval system
