Hemitrygon akajei (red stingray): 140735374
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Entry
140735374 CDS
T11019
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
haka01001
]
140735374 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
haka04054
]
140735374 (ciita)
Enzymes [BR:
haka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
140735374 (ciita)
Protein kinases [BR:
haka01001
]
Serine/threonine kinases: Other
TAF1 family
140735374 (ciita)
Pattern recognition receptors [BR:
haka04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
140735374 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
NB-ARC
LRR_14
AAA_22
CARD
NPHP3_N
AAA_16
LRR_9
nSTAND3
Motif
Other DBs
NCBI-GeneID:
140735374
NCBI-ProteinID:
XP_072916453
LinkDB
All DBs
Position
11:21056595..21162962
Genome browser
AA seq
1320 aa
AA seq
DB search
MIHSKKFLLGLINILSNAPPLKFQNLLIDLLERGLLTKDDYRHYNQCEPEDLSRTILVSA
LGKDENYCQAFLSILCAYFPWICAKLQQVSSGKDQTLSSGQTGNMRNQSYTAEQPAVKSH
NYLTSLQDEQMALPDTCIQNGEAACETGLDDNHSELQRILEDLFEMNMNCEQYEGGIDGI
VKYLQDPRPLNTIALEQYFGEEIALRNTPLSNSTCHSSSLTDDEETCPVTPSYIKAKSRK
RADNGDDRGHEIISEDQAATPKRFRREAKTKTNSLRKKSKCSSPSALTKRQATQTKQENL
DPSPGHCPKTLDALSPVTCSSSIDHLKELKNHVSHFGSNAHLIPVNKDDSATKGAVVPPP
AGFQLLSSSTVPQHVINVPINGIICFLVLNENSQNLEIATLLQTTPDHSQRGSVNGCTQN
VSVIPGNASPAIFNAASPASSVGSPTTPGDSSPQSADYHWSQETTMSAQPVDVPMTPLSV
GSVGPEGVEDCVTMVKEYLKDITQHSYICHEHDEMLLEDIYVDVSMVEVQAETKSGRNST
KCLDKECKIYDIAERERRAVNMGNLFHISGKKQKETKVIALLGRAGIGKSVIVQRICHNW
VNGSFQQFSFVFWFKCRTLNFTKQYTLKDLLFQPFLPSPKNRDEVFQYLCQNPHKVLLVF
DDFEDLQDPDGLLQLTACSSAEKPCSVKQLLAGILQKKLLTGSTVLVTARPKETFNQYLG
KVDKIVEVLGFSPAHVQEFLHKYFEDRLVVEEVVSCLQQQPYMLSLCHIPLLCRFICFVL
KCQYRHGEARLVLPPTLTDLFLNILQILLCSGAPAFPQNQYVIAAQKHSLLEVSKRAFTG
VQRHECVCTESSRSTEMSNFALNHGLLRPFLKTGEVKEQECGKTFSHSSLQNFLGALHLL
FSEEIRCKGLTKIILLQQKRRKSQADWLDIVRRFLTGLAYREGNTFLNCLSGCSKANVKS
KKQKCLRKYFSELEVNSLSASKLLELCHCVYEAQSVELTTQVAAKLSEKLSFRGTRLTPS
DILVLVYVMQRAPSNFTVDLRDTSIDLQGIKQFIESKNVTSFRVSICDAVKLWEHLEQME
LHELLHLSLVKFSVNPFEVKSLKDIDDLDLLVQIHKERRFLSSALRTSRDELQGLPAVRS
LQVLEFALGPVNGPQGFQKLTKILPSLVFLKYLDLEGPSLQKVKMSENKIGDKGAERLAE
VLSHLTCLEKLILSRNQIADRGAQELARSLPNLKFLRTLSLYDNIIGDKGAEKLAEILPV
MKSLKVLDVKFNKITDVGAQRLTQSLKHCPHIEKIWIWSPTITHWMSEHIQQIDVRINLQ
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgatccactccaaaaaattcctgcttggcttaattaacattctgtcaaatgcacctcct
ttgaaatttcaaaacctgctgattgacttgttggaaaggggccttttaacaaaggatgac
tacagacattacaatcaatgtgaacctgaggacttgtcacggaccattttggtatctgct
ctgggcaaggatgaaaattactgtcaagcattcctctccattctttgtgcttactttcca
tggatttgtgcaaagcttcaacaagtttccagtggcaaggatcaaacattgtcaagtgga
caaactggcaacatgagaaaccaaagctacacggcagagcaaccagcagtgaaaagccac
aactatttgacttcgcttcaagacgagcagatggctctgcccgacacctgcattcaaaat
ggagaagcagcatgtgaaacaggtcttgatgataatcactctgaacttcaaaggattttg
gaagatttgtttgagatgaacatgaattgtgagcaatacgagggtggaatcgatggcatt
gtgaagtatttacaggatccacggcctttgaacactatagcactggaacaatattttggt
gaagaaattgcgcttagaaacactccattaagcaacagcacttgccacagctcaagctta
acggatgatgaggagacctgcccagtaacaccatcctacataaaagcaaaaagcaggaag
agagctgacaacggtgatgacagagggcatgaaattatatctgaggatcaagctgcgaca
ccaaagcgattcagaagagaagccaaaaccaaaactaatagtttaaggaagaaatccaaa
tgtagttctccatcagctctcaccaaaagacaagctacacagaccaaacaagagaatcta
gatccttctccaggacattgtccaaagacactggatgccctttcccctgttacctgctct
tccagtatcgaccatctgaaagaactcaagaatcatgtctcacactttggatcgaacgca
catctcattccagtgaacaaagatgactctgccactaagggagcagtcgtccctcctcct
gcaggttttcagcttctgtcgtcaagcacggttccacagcacgtcatcaacgtacccatt
aatggaatcatctgctttttagttctaaatgaaaattcgcaaaatcttgaaatagcaacc
ctgctacaaacaacgcctgaccattcccagcgtggttccgtgaatggctgtacgcagaat
gtttcagtgataccaggaaatgcttcgcctgctattttcaacgctgcctctcctgccagt
tctgtcggcagccctactaccccaggggacagcagtcctcaatctgccgactatcattgg
tcacaggagaccacgatgagcgcgcaacctgtggacgttccaatgaccccgctctctgta
ggcagtgtgggaccagaaggtgtagaagactgtgtaacaatggtgaaagaatatctgaag
gacattacccaacattcttacatttgccatgagcacgacgagatgcttcttgaagatatt
tacgtggatgtctcaatggtggaggttcaagctgaaaccaagtctggaaggaattccaca
aagtgcttggacaaggagtgcaagatctatgacattgcagaacgagaaagaagagccgtg
aacatgggcaatctcttccacatctcagggaaaaagcagaaagaaacgaaagtaattgca
ctgttgggaagagcagggattggcaaaagcgtgattgtccaaaggatctgccacaactgg
gtaaacggcagcttccagcagttctcatttgttttctggtttaagtgcaggacactcaac
ttcacaaagcagtacacgttaaaggatttactcttccagccattccttccttcaccgaag
aacagggatgaagtctttcagtacctgtgtcaaaacccacacaaggttctgcttgttttt
gatgactttgaagatctccaggatcccgacggcctactgcagctcacagcctgcagctca
gctgagaagccgtgcagtgtcaagcagctgctggcaggcattctgcagaagaagctgctc
acggggagcacggtgctcgtcacggcgaggcccaaagagacctttaaccaatacctcggc
aaggtggacaagattgttgaagtgctgggtttcagcccggctcacgtgcaggagttcctg
cacaagtactttgaagaccgtcttgtagttgaagaagtggtttcgtgtcttcagcagcag
ccgtacatgctcagtttatgccacattcctttattatgcaggtttatctgttttgttctc
aagtgtcagtaccggcacggagaggctcgcttagtactgccaccaaccctcaccgactta
tttctgaacattctccagatcctcctgtgctctggagctcctgcctttccgcagaaccaa
tacgtaattgccgcacagaagcacagcctgctggaggtgagcaagcgcgccttcacggga
gtgcagcgccacgaatgtgtgtgcacggagtcgagcaggtccacagaaatgtcaaacttc
gctctgaaccatggacttctgagacctttcttaaagactggtgaagttaaagagcaggag
tgtggaaaaaccttttcccattcctccctacagaacttcctgggagcactgcacttactg
ttttcagaagaaatcagatgtaaaggccttactaagattattctgctacagcagaagaga
aggaaatctcaggcggactggttggacattgtccgaaggtttctgacaggactagcgtac
agggaaggaaatacctttctgaactgtctctctggttgttcaaaggcaaacgttaagagc
aaaaaacaaaagtgtttgcggaaatacttctctgaactcgaggtgaactcactcagtgcc
agtaaactactggagctctgtcactgcgtttatgaagcacagagtgtggaactcaccaca
caagtggcggctaaactgagtgaaaagttgtccttcagaggtacgcgactgaccccttct
gacatattggtattggtgtacgtcatgcagagagctccaagtaacttcaccgttgactta
agggatacgagcatcgacctgcaagggatcaagcagttcatcgaatcgaagaatgtgacc
tccttcagggtgtcgatatgcgacgcggtaaaactctgggagcacttggaacaaatggaa
ttacacgagctgctgcacctgtcccttgtcaagttctctgtcaatccttttgaggttaag
agtttgaaagatattgacgaccttgatttactggtgcagattcacaaggaaaggagattc
ctgtcaagtgccctgagaacgtccagagatgaactccaaggattacctgcagtgaggagc
ctacaagtgctggaatttgccctcggccctgtaaatggaccccagggatttcagaaacta
acaaagattctaccgtcactggtatttctgaaatatttagaccttgaagggccaagtttg
cagaaagttaaaatgagtgaaaataaaattggagacaaaggagctgagcgattggcagag
gtgctgtctcacttaacgtgtctggaaaaattgatattatcacgcaaccagatagcagac
cgaggcgcacaggagttggcaagatctcttcccaacctaaaattcttgaggactctcagt
ttgtatgacaacatcattggtgacaaaggtgcagagaagctagcagaaatactcccagta
atgaaatcattgaaagttctggatgttaaattcaacaaaattacagatgtaggagcccag
agactgacacagagcttaaagcattgcccccatattgagaaaatatggatatggagtcct
acaattacacattggatgtcagaacacattcaacagattgatgtcagaattaatttacag
tag
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integrated database retrieval system
