Hemitrygon akajei (red stingray): 140735422
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Entry
140735422 CDS
T11019
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03420
Nucleotide excision repair
haka03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140735422 (ercc4)
03460 Fanconi anemia pathway
140735422 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haka03032
]
140735422 (ercc4)
03400 DNA repair and recombination proteins [BR:
haka03400
]
140735422 (ercc4)
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140735422 (ercc4)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
140735422 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
140735422
NCBI-ProteinID:
XP_072916584
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Position
11:complement(24917875..24960583)
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AA seq
900 aa
AA seq
DB search
MAPLLEHENQIFLDLFHEDGLVITAKGLGIDRILLNFLKLYCDPGNLVLVLNTNLAEEQY
FIEQLRSEGVSHLPRIITNEIPSSERYAVYTEGGVLFVTSRILVVDFLTDRIPSNLITGI
LVYRAHRIIDSCQEAFILRLYRQKNKQGFIKAFTDDAVAFNLGFCRVERVMRNLFVRKLY
LWPRFHIAVSSFLERYKPEVIELHVSLTPTMLAIQTAIMDVMNACLKELKQYNASLDVED
MSLENAVGNSFEKVIRHHLDPIWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLLE
SLRATEKAFGLNSGWLFLDASNTMFVNARARVYELPEAKLKISKNVSESEAKERDQAEEK
KELVLEPNPKWEALSEVLTEIKRENEPSEELTDSGHVLICASDDQTCAQLKEYITIGAEA
LLMKLYSKMFGKNEKAEYLKTATVKNKPGKSKARPKSANGPKLKKAKTETVKKKKPELTL
TQMVGREIKEDSTEEKEKEDYGSVSMEHSSEETEVNDMMLNLPTDACYGILKEPLIILHP
LHGCNDPYSLSRVLHEIEPRYVILYDAELSFVRQLEVFKASRTGKPLRVYFLIYGGSTEE
QRYLTNLRKEKTAFENLIREKAVMVIPEEREGRNDFNSDLTRDAGLSPAEKDTRKAGGQA
QKKEQHRIIVDLREFRSELPSLIHRRGIDVEPVTLEVGDYILTPDICVERKSVSDLIGSL
NSGRLYTQCTSMSRYYKRPVLLIEFDPNKPFTLNFRGSAHQEISINDITSKLTLLTLHFP
KLRIIWCPSPYVSAELFEELKQTRPEPDAATAMAVTADSEVVSESDRYNPGPQDFLMKMP
GVNSKNCRALMNHVKNIAELVKLSQEQLADILGNANNAKQIWEFIHSSYTDKAVQTKNRR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggctcctctcttggaacacgagaaccagatctttttagacttatttcacgaagatggc
ctcgtcatcacggcaaagggcttgggtatagacaggattctgctgaattttctcaagctg
tattgtgaccccgggaacctggtgcttgtgctgaacaccaacttggcggaagagcaatat
tttattgagcagttacggtctgaaggagtgtcccatcttcctcgtattattactaatgaa
attccaagcagtgagcgttatgctgtgtatacagaaggtggagtcttatttgtgacgagc
cggattctggttgttgattttttaacagatcgtattccttctaatctaattacaggtatt
ttggtatacagagctcacagaatcattgattcatgtcaggaagcatttattcttcgactt
taccggcagaagaacaaacagggttttatcaaggctttcacagatgatgcagtagccttt
aatcttggattctgtcgagtggaacgagtgatgcgaaatttgtttgtccgtaaactgtac
ctttggcctaggttccacattgcagttagctcttttctagaaagatacaaacctgaagtg
atagagctgcatgtttccctcactcccactatgctggctatccagacggccattatggat
gtaatgaatgcctgcttgaaagaacttaaacagtacaatgcatctttggatgttgaggat
atgtctcttgaaaatgcagttggaaactcctttgaaaaggtaatacgtcaccatttggat
ccaatttggcaccagcttggtgcaaaaacaaaatccctggtacaggatttgaagattctt
cgtactctattgcaatatttaacccaatacgactgtgttaccttcctcaatctacttgaa
tctctacgagccacggaaaaagcttttggcctgaattcagggtggttattcctggatgca
agtaacacaatgtttgtgaatgctcgtgccagagtttatgaacttcctgaggcaaagctc
aaaatctcaaagaatgtgtcagaatctgaagcaaaagaaagagaccaggcagaggaaaag
aaggaacttgtcctggagccaaatccaaagtgggaagcattgagtgaagtgttaacagag
ataaaaagagaaaatgaacccagtgaagaactgactgactctggtcatgtactgatctgt
gccagtgatgatcagacctgcgcacagttgaaggaatacatcaccattggagcagaggcc
cttttaatgaagctctatagtaaaatgtttggaaagaatgagaaggctgagtatttaaag
acagccactgtgaaaaataagcctggcaaatccaaggcaagaccaaagtctgcaaatggc
cctaaactgaagaaggcaaaaacagagactgtcaaaaaaaagaaaccagaactaacactg
actcaaatggttggaagagaaattaaggaagattctacggaagagaaggagaaagaagat
tatggaagtgttagtatggaacatagcagtgaagaaactgaagttaatgatatgatgttg
aacctgccaacagatgcctgctatggaatcctaaaggagccactcattatcctccatcct
ttacatggctgtaatgatccgtatagtctgtcacgcgtactacatgaaattgagccccgt
tatgttatactctatgatgcagaactgtcattcgttcgtcagcttgaggtattcaaggca
agcaggacaggcaagccgctgagagtttatttcctcatatatggaggctcaacagaagag
cagcggtacctgaccaatctgagaaaggagaagacagcctttgaaaatttgataagggag
aaggctgtaatggtaatccctgaggagagggaaggaaggaatgacttcaactcagatctt
acacgagatgctggcctctcacctgctgaaaaagacacgcggaaagccggtggccaggct
cagaagaaagagcaacatcgcattatagtggatttacgggaattccgcagcgagctgcca
tccctgatacatcggcgtggcattgatgttgagccagtcaccctggaagttggtgattac
atcctgactcctgacatttgcgttgagcgcaagagcgtgagtgatctgattggctctttg
aacagtggccgcctttacactcagtgcacttccatgtcacggtactacaagcggcctgtc
ctgttgattgagtttgaccccaataagcctttcaccttgaacttccgaggatcggcccac
caggagatttccattaatgacattacatccaagctcaccctgttgactctacacttcccc
aagctgcgaattatctggtgcccctccccgtatgtttctgctgagctgtttgaggagctg
aaacaaacccggccagagcctgacgccgctactgccatggccgtcacagccgattctgaa
gtagtttccgagtcagaccgatacaatccaggtccacaagatttcttgatgaaaatgcct
ggagtgaattctaaaaactgccgggcactgatgaatcacgtaaagaacattgctgagctg
gtcaaactctctcaggagcaattagctgacatcttggggaatgctaacaatgccaaacag
atttgggagttcattcactcatcgtatacagacaaggcagtacaaaccaaaaatagaaga
tga
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