KEGG   Hemitrygon akajei (red stingray): 140735644
Entry
140735644         CDS       T11019                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
haka  Hemitrygon akajei (red stingray)
Brite
Messenger RNA biogenesis [BR:haka03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     140735644
Chromosome and associated proteins [BR:haka03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    140735644
SSDB
Motif
Pfam: TNRC6-PABC_bdg Ago_hook RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 140735644
NCBI-ProteinID: XP_072917029
LinkDB
Position
11:complement(56565820..56732461)
AA seq 2122 aa
MRGLEANATKETQEKQNRDRVQEKEEQLMEERKKRKDDKKKKEAALKKAIEQKSKVPAPS
KTSQSQPQPANSNSGTSINTSNNSNAKRVPANNQQQALSRYPPREVPPRFRHQEQKQLLK
RGQQLPSTAGTATSVVTSQSGSSAVTVQTVTNGQLQYSSKTLTGMPPIRDMVSHSPNQSD
LNHSGLGSHYENSHWGPVSTNSDSTTNWDKVIVDGSDKEAWPSITGSDPELASECMDIDS
ASSSGSEKNLSTMASGSTVSDGDGNRTGSGSGSSSQFVVGNVSNNVGNGSINGPWGGSRG
SISSTCQGSAENVDSKPESSHGKLNAWGSIGSTSSGSLNQNGLNPNTNLGAWPLLENDGN
TVQGPVPGSSSGSNVQRSTVGQMLNNQSVNMGLSAHGSWGGLQENSDAEVNGTRKVSFSG
QPQNLNTEMNGPNNTTNPLTSSLPNSTSSMQTNELPKHTGPGAWGVPLGMSTVNPSQLQA
SSVTNGTSVSQLGNGGISEGINSGTYGTTWGTPGTNYSGEKCPGPSCNLGQASGDTVNAT
LAQSAINGSGNSSYKNNGGSNRGGVTWESGVVNSHNVNWGAGNSLGSGGTRKVWGNPAPN
ANTGTKISNGEWNKLPNNQHSSNGVNGSGNRKGTNGWKSLDDALCGQNQNSASQPSEQNN
VWVKTSTSGTADSEGSTESTGSRHDRITAGTNDGNNRRGEKRKPDQPGMVQSILSRTDLD
PRVLSNTGWGQTPIKQNTAWDIEPSAKSERKTDNGTEAWGCCVSQTSNSGGWGDGPGPNS
NDTSSVSGWGDPKPSTVSCNPSWGDTKGSSGQGGWEDNTAATGTVKSNQTWGSNKEEKLA
AWNDAQKVKQGWSDGQKSNQSWGLSATDGWGENSKSGQWGELQKTGAGSWDNDSERSAPG
WNEPGRPGTSRGTWTSGNNSDSSNSTGWGECAKAAQSPQGWGEPIKAAQSPQGWGDTSKP
AQSPQGWCEPVKPTQSPQGWGEPSKPAQSPQDWREPIKSSNSADWHKPQDGNSPWANKPS
GQGWLNGPMPAPSKEEEPTGWEEPSPESIRRKMEIDDGTAAWGDPSKYNYKSVNMWNKNT
QSSNNGSEQSAQIMSSPTTPQPPPQLPQQMPPPSAIQNKENNSSGWGESCTVQTKPDSSW
GEPPALTVTVDNGTAAWGQPVDTGASWREPVNDSAGTSGWGNTPAAPPPPNRPGPKPMQD
GWGDEETLVPGPRHSSWEEEEGDSVMWNSNTSQESNSSSNWASKKVALKGMVKGGNKQDD
IWMNQLMKQFSNIGFPRESTEDTKSNKMDIPVGMLRDKRMEMDKHGMNIGEYSGILGKGH
TSRPQISKESSMERNPYYDKLSLSLSNQDGIIAEEPQNLTYISAPTMKLPPSNCALPNQA
LGSVGLGMQNLNSVRQNGNPNIFGGSNAAAQARGMQQPPAQPLNSSQPNLRAQVPPSLLS
PQVPASLLKYATANGSLNTALLNFGPQQMAMLNQLSQLNQLSQLSQISQLQRLLQQQKAQ
NQRNMSGPMRQSQEQAARVLNMQQMLQHPRQLDTSLLKQQSSSQQQPMHQPSMKPFPENL
MPPTPHELQTKEPPSLNSYSSYPLGGFRQPNHRRSDSMVPETAKLAHVPLNCSVPKMFLP
DNNLNHSLLNSPLSNANSHMPSSPIHQHAGRKLTTQERSMPRGLNPNLNVPLDFGSIVNL
KEPQTQQSRLKQWTASESLPVNSSLDQNSSKHGATSSGLSICSGKLLEESPFGHFDISMK
SLASPPGSVGDGWPSAKSPSDKLSSNVNWPPEFRPGEPWKGYQNIDPETDPYVTPGSVMT
NLSISTARDLDLLRDRNNIGSSSSMNTTLPSTSAWSLVGASSYNSSLSSTAQSTPARIGD
PKSTWSPGPVTNASLAHELWKVPLPPKNTTAPSRPPPGLTNQKPSSSWGNSSLRMGGGWG
SSDSRYNHGPSWGDISSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNA
LVCYSSKEEAAKAQKSLHMCVLGNTTILAEFASEDEINRFFAQGQSLTPSLGWQSLGSSQ
NRIASIDSSHPFSNRNDLSHWNGAGLSGTGSGDLHGTSLWGTPNYSTSLWGTPSSNDMRG
IGSPSPINAFLPVDHLGGGESI
NT seq 6369 nt   +upstreamnt  +downstreamnt
atgagaggattggaggctaacgctaccaaagaaactcaagagaaacaaaacagggataga
gtgcaagaaaaggaagaacagttgatggaagaaaggaaaaagagaaaagacgacaagaag
aaaaaggaagccgctctgaagaaggcaattgaacaaaaaagcaaagtgccagcaccatcc
aagaccagtcaaagccagcctcagcctgccaactctaacagcggcacttccataaatacc
agcaacaatagcaatgccaagcgggtcccagccaacaatcagcagcaagccttgtctcga
tatcctcctcgtgaagtacctccacgctttcgacaccaggagcaaaagcaactgctgaag
aggggccagcagctaccatcaacagctggaactgcaacatcggtagtcaccagccagtct
ggaagcagcgctgttactgtgcagacggtgaccaacgggcagctgcaatatagcagcaaa
acattgacaggcatgcctcccattcgggatatggtcagccactcccctaaccagtcagat
ttaaaccacagtggtttgggatcgcattatgaaaattctcactggggacctgtctctacc
aacagtgattctactacaaattgggataaagttattgtagacgggtctgacaaagaagcc
tggccttcaatcactggcagtgacccagagttagcttcagaatgcatggacattgactct
gcttcaagctctgggtcagagaagaatctcagtaccatggcttcggggagcacagttagt
gatggcgatggcaacagaaccggcagtggaagtggttcttcaagtcagtttgtggttgga
aatgtcagcaataatgtaggaaatggtagtattaatgggccttggggaggatctcgaggc
tccatatcaagcacatgtcagggttctgcagaaaatgtggatagcaaaccagaaagcagc
catggtaaactgaatgcttggggcagtattggttccacgtccagtggttcattgaatcag
aatggtttgaatccaaataccaacctaggtgcctggcctttgttggaaaatgatggaaat
actgtgcaaggacctgtgccaggtagcagttctggcagcaatgttcaacgtagcactgta
ggtcaaatgctgaataatcagagtgttaacatgggactatcagctcatggttcgtgggga
gggctgcaggagaattctgatgcagaagtgaatggtacaaggaaggtttcattcagtgga
caacctcaaaaccttaacactgaaatgaatggaccaaataacactactaaccctttgacc
tctagcttaccaaactctactagttcaatgcagacaaatgaactgcctaaacatacaggg
cctggggcctggggtgtacccttaggaatgagcacagtaaatccatctcagcttcaggcc
tcttcggtgacaaatggcacttcggtttctcaacttggcaatggaggaatcagtgaggga
ataaacagtgggacttatggtacgacttggggtacacctggcactaactactctggagaa
aaatgtccaggccctagctgtaatttggggcaagctagtggtgacactgtgaatgcaact
ctagcacaatctgctattaatggttctggaaattcttcttacaaaaataatggtggaagc
aatagaggaggagtcacatgggagtctggtgtggtcaactcccataatgtgaactgggga
gcagggaacagtttaggctctggagggactcgaaaagtctggggaaacccagcaccaaat
gcaaacactggcactaagatctcaaatggagaatggaacaaactgcctaacaatcagcat
tccagtaatggtgtaaatggaagtggtaataggaagggaacaaatggatggaaaagtcta
gatgatgctctttgtggtcagaatcaaaattctgcatctcagccaagtgaacagaacaac
gtatgggtcaaaacttcaacatcaggtactgcagacagtgaggggagcacagaaagtact
ggaagtcgtcatgatagaatcaccgcaggaaccaatgatggcaataacagacgtggtgaa
aagagaaaacctgaccaaccaggaatggttcaaagtattctgagtagaacagacttggat
ccccgtgtcctttccaatacaggttgggggcagactccaattaaacagaacactgcctgg
gacattgaaccttcagcaaagagtgagagaaaaactgacaatgggacagaagcctgggga
tgttgtgtttcccagacttcaaactcagggggatggggggatgggcctggcccaaacagt
aatgatacctcttcagtatccgggtggggggatccaaagccttctacagtctcttgcaac
cctagctggggagacaccaaaggctcaagcggccaagggggttgggaggataatactgct
gctacaggaacagtaaagagcaatcaaacatggggaagtaacaaagaagaaaagctagct
gcgtggaatgatgcacaaaaggtcaaacagggatggtctgatggacagaaatcaaaccag
agttggggactgtctgcaactgatgggtggggagagaattcaaagagtggccagtggggg
gaattacaaaagaccggtgcaggcagttgggataatgacagtgaaagatctgcgcctggt
tggaatgaacctgggagaccaggtacaagccgaggcacatggacaagtggaaacaattca
gattccagtaatagtacaggctggggggaatgtgccaaggctgctcagtcccctcagggc
tggggggaacctatcaaggctgctcagtccccccagggatggggggacacatccaagcct
gcacaatctccccagggttggtgtgagcctgtcaagcccacacagtcaccccagggctgg
ggggagccctctaagcctgctcagtccccgcaagactggagggaacccatcaagtcaagt
aactctgcagactggcacaaaccacaggatggtaacagtccttgggccaataaaccttct
ggccagggatggcttaatggcccaatgccagcaccatcgaaagaggaggagcccacaggc
tgggaggaaccttctccagaatctattcgtcgcaaaatggaaattgatgatggtaccgct
gcttggggagatccaagcaagtacaactacaagagtgtgaacatgtggaacaaaaataca
cagagcagcaacaatggctcagagcagtcggcacaaatcatgtcttcgccaacgacacca
cagcccccgccacagctaccgcagcaaatgccaccaccaagtgccattcaaaacaaggag
aataatagctccggctggggagaatcttgcaccgttcagacaaagccagactcctcttgg
ggagaaccacctgctctaactgtgacggtagacaatggaacggcggcctgggggcaacct
gtggatacaggggccagctggagagaaccggttaatgacagtgctggtacctctggctgg
ggtaacaccccagctgccccaccacctccaaatagacctggtcccaaacctatgcaagat
ggctggggtgatgaggaaacattggtgccaggacctcgtcactctagctgggaggaggaa
gaaggggactcagtgatgtggaacagcaacacctcacaagaaagcaactcctcttcaaat
tgggcatccaaaaaagtggctttaaagggcatggtgaaaggaggaaacaagcaagatgat
atatggatgaatcaattaatgaagcaattctctaacattggatttcctagggaatctact
gaagatacaaagagcaataagatggacatacctgttggtatgttaagagataagagaatg
gagatggataagcacggaatgaatattggagaatatagtggcattttagggaaaggacat
acttctcgtcctcagatttccaaagagtcttccatggaacgcaatccttattatgataag
ttgtctctgtctttgtccaatcaagatggcattatagcagaagagccccaaaacctaacg
tacatctctgcaccaaccatgaagcttcccccttcaaactgtgcactacctaatcaggct
cttggctcagtgggtctgggcatgcaaaacttgaattctgttagacagaatggcaatcct
aacatatttggcggcagcaatgcagcagcacaagccaggggcatgcaacagcctccagca
caacctcttaactcatctcagcctaatcttcgcgctcaagtgcctccttcattattatcc
cctcaggttccagcatcattactgaagtatgcaacagccaatgggagcctaaatactgca
ctattgaactttggcccccagcagatggccatgctgaaccagctctcccagttgaaccag
ctgtctcaactttcacagatctcccagttacagcgactgctacagcaacagaaggcacag
aaccagaggaacatgtctggacccatgcgtcagtctcaagagcaggctgctcgtgtactc
aacatgcaacagatgctgcaacacccccgtcaactggatacaagccttctgaagcaacag
tcttcatcacagcagcagccaatgcatcagccctccatgaagcccttcccggagaatctc
atgccccctacccctcacgagctgcagacaaaagagccaccttcgctcaactcatacagc
agctaccctttaggtgggtttcgtcaacccaatcacaggcggtctgattccatggtgcct
gaaactgctaaacttgcccatgtgcctttaaactgttctgttcccaaaatgtttctacct
gataacaatcttaaccacagcctcctcaactccccacttagtaatgcaaatagccacatg
ccaagctcacccatccaccagcatgcagggaggaagcttactactcaagaaagatctatg
ccaagaggcttgaatccaaacttgaatgtacccctggatttcggcagtattgttaacctg
aaagagccacaaacccaacagtctcgactaaagcaatggactgcctcggaaagccttcct
gttaattcctctctcgatcaaaactccagcaaacatggtgctacttcaagtggtcttagt
atttgttctggaaagttgcttgaagaatctccttttggtcattttgacatttccatgaag
tctctggccagtcctcctggatctgttggagatggctggccaagtgccaaatcacccagt
gataagctctctagcaatgttaattggccaccagaatttcgtcctggtgagccttggaaa
ggttatcaaaacattgaccctgaaactgacccttacgtcactcctggcagtgtaatgacc
aatctgtcgatctctactgcccgggatcttgacctcctcagggacaggaacaatataggg
tcatcctcatctatgaacaccacgctgccttcaactagtgcctggtcccttgttggtgcc
tccagctacaatagttccctcagcagtacagcacaaagcactccagccagaattggtgac
cccaagtccacctggtctcctggtccagttaccaatgcttcccttgctcatgaactgtgg
aaagtccccctgccacccaaaaacactactgctccgtcccgcccaccaccagggctgacc
aatcagaagccttcgtcctcatggggaaacagctcgctgcgcatgggtggaggatggggg
agttccgactccagatacaaccatggtcctagctggggcgacatcagctcagggagaata
acaaattggcttgttctcaagaacctcacgcctcagattgacggctccaccttgcgtaca
ctgtgcatgcagcacggcccactaataacattccaccttaacctgccccatggaaacgct
ttggtatgttacagttcgaaagaagaggcagccaaggcacagaaatctctgcacatgtgt
gttttagggaacactaccattcttgctgagtttgccagtgaagacgagattaatcgcttc
tttgcacaaggccagtcgttgacgccctctctgggctggcagtctctgggatccagccag
aaccgtattgcatccattgacagttcccacccattctcaaaccgcaatgatctcagtcac
tggaatggagctgggctgtcaggaactggtagtggagacctccatggcacttcactttgg
ggtactcctaattattccactagcctctggggaaccccaagcagcaatgatatgcgggga
atcggcagcccatcccccataaatgctttcctccccgttgatcatcttggaggtggagag
tccatttaa

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