Hemitrygon akajei (red stingray): 140735672
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Entry
140735672 CDS
T11019
Symbol
rai1
Name
(RefSeq) transcription factor 20
KO
K19749
retinoic acid-induced protein 1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140735672 (rai1)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
140735672 (rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
140735672
NCBI-ProteinID:
XP_072917099
LinkDB
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Position
11:68089105..68191676
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AA seq
1824 aa
AA seq
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MQSFRDPGGFQGAQQNFQQVRADSARMDTYRQQNSVAQTYEAHRISSKEYYNQQAFQSYS
TNATGSYFSGTKQVPAQHPQSRSSNYQSSGYSRQFQSEGQPSKWGSPASSVGGLSQYVQD
SFKGSVPSTTSVAAYPQQHMTGGAAQNPPGPHTHFIQQPHHKPVMHQATTYVPRAAHFNQ
AFQSSPSTYPAVQDYSNSSRSYEGFAQVPISSRYDQQAGGTPDYSTQASYAYKAAITKPG
GFEQSKVAHVKQQNLQYHNQTKMHLLNQSPQVYYQPDAPVKSPEQFYQTFSPTSTHSSVS
TVVRSPSYSSTPSPLMPTPEALQFAPPSEAGSIAPDLKSNISHLMPTVTNSTNQISSKSQ
ADACKVFLKDKIPEKLLSDGAFSSLVALSSQVENIPRTVQQLLLSNTLAPHRKIAKRLPK
KSELLKELKSSKESMYSEEALSAQTDLQEGDYSSSPDDQMQKGHFFQNHSVNLDALRKNL
DSILACSVTSPNEVVAETKADDSGLSKENCSASSGLSTLVADGQPSLFGKDDTKASSVII
LKDSFKERLEPELKFNHLDEDKESKGSPLNLDSGDNFYGHLTRPKHLGQTLSSDCNEGRV
KGDYSMMTKGFGDSCSESQFLPNRMDSTNLLQPLAGDYKDNLVSSLSGSNHQYCSSLISS
ASQDLEKLNLLDLPDKRGKEQSEEWEELEAVTPECDLQKQFLQKVHVSSKEQSPFQADLT
HAGFTQALEGMKEADERDSKDIDSRNSELRLLAPEQEPPKTDLADDKETATEPDDSMVPQ
DQATALSERKSVICDTSPTRAAAKEIVPSHTQGNSGVTEGKPSAAESSEDKVGLSAGPRL
LGPSVIHVGPAILAESKVDQEETSGAEGFPDHLTEDALEPKAAETTELPALSSDLINSAL
TEIENGPTKVSGSRGGRVRRLSSRVAQGTGPRGKEHSLSQQEDNLQHLKIVPTKPRCLGP
LRDRAKGKTLQEGSAATEAVVNVPTRMCTRSSSALLDTELSLQSRALLRRKMGSQREDGS
RELSSRQRSPLDSDKCLIHRQGLSAGVRAHLAPSVAQGRPSCTGHPDQQLKGRDLLSQEP
NSYKSVVLRARTRAQGMIMHKDVKQRKNCDLTASRCFTTRNNSLMAKPQKQLTARQETPD
YIEGEIAAEKLKARNSASRLEGVEEQKFPLSHPLKRKGYCTFPLIPAKRQHQMLKATDIR
TEKQKQSPGPSSDTNLGNTEEPLQGTSCKGLSEHANSKEPSQPDPSCHSGISLKTPPKTK
ILPPRKGRGLKLEAIVQKITSPNSKSFACSNYSDSNAPCLTLDEILSLKEEKLNENASSE
TLSEQNKLMAKDAAPKLALMDLSKKCLIPSKRLKEDNEIKTQEKSCPRAMTDVKVTAEPE
VTELGDQNTAGEKEEEVTTVPDNSPQLSSTFSVLAPILDPGTATEGESGQDTVETKRHTP
PKCCLSPAKRHSQLSGSKVKQTKGSCKVKRPGGRGGRRRRKHLKESKITKTAHRRKKQMK
RRNLPLVDSKEPVIRLKYVSYKMPRASNKTLAFSPYIRVEKNNVVSSFCTIINTLSEEQS
SIQKMKKRSTASQAPMSMSKTLPTSSAMLPGPVVLDSTKQGYLLCCLCGRAKNHKELGDL
FGPYYPEDYIPPLTKNQHVRGKFEIKIGVKETPSRLSAEPKVVDSENESMASNKEKAVEV
EDQGPLRTSSREKCKKLSCYCCEKTTEDSELKKARRRVGVEEEPQPLELPLDPQERWLHG
ACAVWTSGIYLAAGKLYGLQEAVEMASEMRCSMCEQTGATLGCYSKGCNQKYHYICAIES
GCQLSEENFSMKCSKHKSILSKIL
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgagaccctgggggcttccaaggtgcccagcaaaacttccaacaggta
cgggccgactctgcccgcatggacacttacaggcagcagaactctgtagcccagacctac
gaggctcatcggatcagctcaaaggagtattacaaccagcaagccttccagagttacagc
accaatgccaccggcagttacttcagtggcacaaaacaagtccctgcccaacacccacag
agcagatcttccaattaccagagcagtggctactccagacagtttcagagtgaagggcag
ccctcgaagtgggggtctccggcctcttcagtcggaggactgtcccagtacgtgcaagac
tcttttaaaggttccgtcccttcgacaaccagcgtggctgcctacccccagcagcacatg
acaggcggtgctgcccagaacccgccaggtccacacactcatttcattcagcagcctcat
cacaagcctgtgatgcaccaggccaccacctacgtcccccgagcagcccacttcaaccag
gcgtttcagtcctcacccagcacctaccccgcggtccaggattacagcaattcctcccgc
tcctacgaaggcttcgcacaagtgcccataagctcccggtatgaccagcaggccgggggc
acaccagactattccacccaagccagctatgcgtacaaagctgccattaccaagcccggg
gggttcgagcagagtaaagtggctcatgtcaaacaacaaaaccttcagtatcacaaccag
acaaagatgcaccttttaaaccagtcaccgcaagtctactaccagcctgatgctcctgtg
aaatctccagagcaattctatcagacctttagcccaacgtccacccactcttctgtctcc
accgtggtcagatccccgtcttacagctccactccgtctccactgatgcccacccctgag
gctctgcagtttgcgcccccctctgaagcaggttccatagcacctgacctcaagagcaat
atttcccacctgatgcccaccgtcaccaattccaccaaccagatctccagcaagagccag
gctgatgcttgcaaggtcttcctcaaagataaaattcctgagaaattgctgtcagacgga
gctttcagcagcctggtagcactgagctcacaggtggaaaacatccccaggacagtccaa
cagctcttgctgtccaacacgttggctcctcacaggaagatagccaaacggctgcccaag
aagtcagaactgttaaaggagctgaaaagctccaaggaaagcatgtattcagaagaagca
ctatcagcacagaccgacctgcaggagggcgactattccagcagccctgacgatcagatg
cagaaggggcatttctttcagaaccactccgtgaatctggatgccctgaggaagaacctg
gactccatcctggcctgttctgtaacctctcccaatgaggtggtggcagaaaccaaagcc
gatgactcggggctgagcaaggaaaactgttctgcttcttcaggcttgtccacgctggtg
gcagatgggcaaccaagcctttttgggaaagacgacacaaaggcctccagtgtcattatt
ctcaaggactccttcaaggaaagattggaaccagaacttaaattcaatcatcttgacgag
gacaaagaaagcaagggctctccgttaaacttggatagtggtgataacttttatggccat
ctcactcggccaaagcatttgggccagactctcagctcagactgtaacgaggggagagtt
aagggtgactactcaatgatgacaaaggggtttggtgatagttgtagtgaatctcagttt
ctccccaatagaatggacagcactaacctcttacagccgttggcaggagattacaaagat
aatttggtttcctctctgtctggcagtaaccatcagtactgctcctcgctgatatcaagt
gcctcacaggatctggaaaagctgaatcttttggacttgcctgataagagagggaaggag
cagtcagaggagtgggaggaattggaggctgttactcctgagtgtgaccttcagaagcag
ttcctccagaaagtacatgtcagctccaaagagcagagtccttttcaggcagacttgacc
catgcagggttcacccaagctttggaagggatgaaggaagctgacgagagagactctaag
gacatcgatagcaggaattctgaactgagacttctggccccagaacaggagccaccaaag
actgacctggcagatgataaggagacagcaacagaaccagatgattccatggtcccacaa
gatcaggccactgctttatctgagagaaaatctgttatctgtgatacctctcccacgcga
gctgctgccaaagagattgttccttcacacacacaggggaacagtggcgtaacagagggc
aaaccaagtgcggcagagagcagtgaggacaaagtgggtctgagtgctggtccccgcctg
ctggggccctctgttattcatgtgggaccagccatactggcagagtcaaaggttgaccag
gaggagacctcaggagctgagggcttcccagatcacctgacagaagatgccttggagccc
aaggcagcagagacaactgagctgccggcactctcctctgatctaatcaactcagcgtta
actgaaatagaaaatggtcccaccaaggtgtcgggaagcagaggtggccgagtccggaga
ctctcgtcaagagtggcacaaggaactgggccgaggggcaaagagcattcgctgtcacag
caagaagacaacctccagcatctaaagatagtacctaccaaaccgaggtgtttggggccc
ctgagagatcgagctaaaggcaaaaccctgcaggaggggagtgctgccactgaggcagtc
gtgaatgtgcccacccgaatgtgtacccgatcctccagtgccctgcttgacacagaactg
agcctccagtcgcgggctcttctgagaaggaagatgggctctcagagagaagatgggtca
agggagctaagctccaggcagcggtcacccttggattcagacaagtgtctgatccacagg
caaggtctcagtgcaggtgtccgagcacacctcgccccctcggtggcccagggtcggccc
agctgcactggccaccctgatcaacagctgaagggtcgcgacctcttgagccaggagccc
aattcctataaatctgttgtgctaagggccaggacaagggcgcagggaatgataatgcac
aaagatgtgaaacagcgaaagaattgcgatctcactgccagccgatgtttcactaccaga
aataactcattgatggcaaagcctcaaaaacagttaactgccaggcaagagacaccagac
tacattgaaggggagattgcggctgaaaagttaaaggcacgaaactcggcttcaaggcta
gagggagtagaggagcaaaaatttcccctatcacatcctttgaaacgaaaaggttattgc
acttttccattaatcccggccaaaaggcaacaccagatgttaaaagcgactgatatcagg
acagagaaacagaaacaatcacctggtccttcatcagacactaatctaggcaacacagag
gaaccccttcaaggtaccagctgcaaggggctttcagagcacgccaacagcaaggaaccc
tcccaacctgacccaagctgccactcggggatttctctcaagaccccaccgaagaccaaa
attctccctccccgaaaaggcaggggcctcaaattagaagccattgtgcagaagatcact
tctccaaactccaagtcattcgcctgtagcaactattccgatagcaatgcaccctgcctg
accctggatgagatcctctccctgaaggaagagaaattgaatgaaaacgccagcagtgag
acattgtccgaacagaacaaactgatggccaaagatgctgctccaaagcttgccctgatg
gatctaagtaaaaaatgccttatcccttccaaaagactcaaagaggacaatgaaatcaag
acacaggaaaagagttgtccccgtgcgatgactgatgtgaaggtgacagcagagccagaa
gtcacagagctgggagaccagaacactgcaggggagaaagaggaggaggtcaccactgtt
cctgacaattctcctcagctctcttccaccttctcagttttggctcccattttggatcca
ggcacagcaacagagggggagagtggtcaggacactgtggagacgaaaaggcatactcct
cccaaatgttgcctctctcctgcaaagagacacagtcagctgtcggggagtaaggtcaaa
cagaccaagggtagttgcaaagtgaaaaggccaggcggccgaggcggcaggaggaggagg
aaacacctcaaagagagcaagatcacaaaaactgcccacaggcgcaagaagcagatgaag
agaaggaatctcccattggtggacagcaaggagcccgtaatacgcctgaagtatgtatca
tacaagatgccaagagcaagtaacaaaactctggctttttccccttacatacgtgtagag
aagaataacgtggtttcgtccttctgcaccattatcaacacattgtcagaggaacaatcc
agcatccagaagatgaagaagaggtctacggcttcacaggcccctatgtcgatgagcaag
acgctaccaacatcttcagcaatgttaccgggtccagtggtgttggattccaccaagcag
ggttatctgctctgctgtttatgtggaagagccaaaaatcacaaggaacttggagacttg
tttggaccctattacccagaggactacatcccaccactgacaaagaaccaacacgttcgg
ggaaaatttgagatcaaaattggtgttaaggaaacacccagtaggctgtctgctgagccc
aaagtggtggactcggagaatgagagcatggccagtaacaaggagaaggcagttgaggtg
gaagatcagggtccacttcggaccagctcaagagagaagtgcaagaagttgagctgctac
tgctgtgagaagacgacggaagactcagagctaaagaaggcaaggaggagagtgggtgtg
gaggaagagccacagcctctggagctgcctctcgacccacaggagcgctggctgcacggg
gcctgtgcggtgtggaccagcggcatctacctggcagccgggaagctgtacggtctgcag
gaagcagtggaaatggccagtgagatgagatgctctatgtgtgagcagacgggcgccact
cttggctgctattccaagggatgcaatcagaaatatcattatatctgtgccattgaatcg
ggatgccaattaagtgaggagaatttttcaatgaagtgctcgaagcataagagcatattg
tctaaaatactataa
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integrated database retrieval system
