Hemitrygon akajei (red stingray): 140735778
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Entry
140735778 CDS
T11019
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140735778 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140735778 (prpf3)
Spliceosome [BR:
haka03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140735778 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
MHB
Motif
Other DBs
NCBI-GeneID:
140735778
NCBI-ProteinID:
XP_072917357
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All DBs
Position
11:83156380..83223316
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AA seq
686 aa
AA seq
DB search
MSLSLTKRDLDELKPWVEKTVKRVLGFSEQTVVTAALNCVGKGMDKKKTVEHLKPFLDDS
TVRFVDKLFEAVEEGRNSRHSKSSSEKHRKRELKEVFGEDSEVTRELSAKRKRIPRFEEV
EENEIIPGPPTESPGMLTKIQIKQMMEAATKQIEERKRQLSLITPSFPQRVSAPALSADL
PPMGQTIQPSQAASFMNDAIEKAKKAAELQARIQTQLSLKPGLLQSTNLVGLANLHAMGI
APPKVESKEHLKPTPLILDDQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQLLLKE
KPSDDLESNNFFDPRVSMVPAQRQKRLFRFHERGKFEKIAQRIRTKAQLEKLQTEIAQAA
KKTGIQASTKLALIAPKKELREGDVPEIEWWDSYIIHSGVELTAENLASERTFHGITNLV
EHPTQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGLKELQEKIRLGLVPPPEPKVRI
SNLMRVLGTEAVQDPTKVEAHVRAQMAKRLKAHQDANSARKLTADQRREKKMKKLKEDLT
QGAHIAVYRIRNLSNSAKKFKVETNAAQLYLTGTVVLHKDVNVVVVEGGPKAQKKFKRLM
LHRIKWSEQTASSRDDDEEGSDDDAVKRVNKCALVWEGTAKERSFGEMKFKQCPTESMAR
EHFKKHGVEQYWDLAISESVLEVTED
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctcgctgaccaagcgggatctggacgagctgaagccatgggtggagaagacg
gtgaagagggtgctgggtttctcggagcagacggtggtgaccgctgccctcaactgcgta
ggcaaggggatggacaagaagaaaaccgtggagcacctgaagccgttcctggatgattca
acggtgcggtttgtggacaagctgttcgaggcggtggaggaaggccgtaactcccgtcac
tccaagtccagcagcgagaaacacaggaagcgggaactgaaggaagtcttcggcgaagac
tcggaagtcacccgggaattgtcggccaagaggaaacggatcccgaggttcgaggaggtg
gaggagaacgaaattatcccaggtccccccactgagagccccgggatgctcacaaagatt
cagatcaagcagatgatggaagctgcaacaaaacagatcgaggagcggaagaggcaactg
agtctcatcactccctcctttccgcagcgggtctcggctccagccctctcggccgacctc
cccccgatgggccagactattcagccatcccaggctgcctcgttcatgaatgacgccatc
gagaaggcgaagaaggcggcggagctgcaggcacgcatccagacgcagctctcgctgaag
cccggcctgctgcagagcaccaacctggtgggactggccaacctgcacgccatgggcatc
gctcctccgaaggtggagtcgaaggagcacctgaagccgacaccgctgatcctggacgac
cagggccggacggtggacgccacgggcaaggaggtggagctgacgcaccgcatgcccacg
ttgaaggccaacatccgggcggtaaagcgggagcagttcaagcagctgctgctgaaggag
aagccttccgacgacttggagtccaacaacttctttgatccccgcgtgtccatggtgccc
gcccagcggcagaagaggctcttccgattccacgagaggggcaagttcgagaagatcgcc
cagaggatacggacaaaggctcagctggagaaactacagaccgagatcgcccaggcagcc
aagaagacggggatccaggcgtcgaccaagctggccctgattgcccccaagaaggagctg
agggaaggcgacgtaccggagatcgagtggtgggactcgtacatcatccacagtggggtt
gaactgactgcagagaacttggccagcgaacgcacctttcacggaatcactaacctcgtg
gagcatccgacccagatcagccctccagtcgacacagacaagcctgtgaccctcggggtc
tacctgaccaagaaggagcagaagaaattacggcggcagacccggagagaggggctgaag
gagctacaggagaagatccgattggggctggtacctcctcccgagccgaaggtgcgaatc
tccaacctgatgcgagtactcggtacggaggctgtgcaggatcccaccaaggtcgaggca
catgtcagggcccagatggccaagaggctgaaggctcaccaggatgccaacagcgcccgg
aaactgacagcagaccagcgacgtgagaagaagatgaagaaactgaaagaggacctgacc
cagggggcccacattgccgtctaccggatccgaaacctgagcaactccgccaagaagttc
aaagtcgagacgaatgcagcgcagctctacctgacggggacggtggtcctacacaaagat
gtcaatgtcgtggtggtggagggaggtccgaaagcacagaagaagttcaagcgactgatg
ctgcaccgcataaagtggtcggaacagacagccagttcccgtgacgatgacgaggaagga
tctgacgacgatgcggtgaagagggtgaacaagtgtgcgctggtctgggagggaacggcg
aaggagaggagcttcggggagatgaagtttaaacagtgccccacagagagcatggcacgc
gaacacttcaaaaaacacggtgtggagcagtactgggacctggccatcagcgagtcggtg
ctggaggtcaccgaggactga
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