Hemitrygon akajei (red stingray): 140735787
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Entry
140735787 CDS
T11019
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03013
Nucleocytoplasmic transport
haka03015
mRNA surveillance pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140735787 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
140735787 (rbm8a)
03015 mRNA surveillance pathway
140735787 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140735787 (rbm8a)
03041 Spliceosome [BR:
haka03041
]
140735787 (rbm8a)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140735787 (rbm8a)
Spliceosome [BR:
haka03041
]
Complex C
Other components
EJC/TREX
140735787 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
140735787
NCBI-ProteinID:
XP_072917368
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All DBs
Position
11:complement(84361663..84375346)
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDDEGDESIHKLKEKAKKRKGRGFGSEEGARSRLREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGSELAGQPISVDWGFVRGPPRSKRRSGRRRSRSPDRKRH
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcatgaggcgggcggcgaggatttcgccatggacgatgag
ggtgacgaaagcatccacaaactgaaggagaaggcaaagaagaggaagggtcgaggcttt
ggatcggaggaaggcgctcgctccagactgcgtgaggactatgactccgtggagcaggat
ggcgatgagccgggtccccagcgctcggtcgaaggctggatcctgtttgtgactggcgtc
cacgaggaggcaacagaggaggacatccacgacaaatttgcagaatacggcgaaataaag
aacctccacttgaacttggaccggcggacgggctacctgaagggttacgctctggtggaa
tacgagacgtacaaggaggcccaggcagcaatggagggattaaatggttcagagctcgcg
ggacagcccatcagtgtagactggggcttcgtcagagggcctccccggagcaagagacgg
agtggacgaaggagaagccggagtccggataggaagcgtcattga
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