Hemitrygon akajei (red stingray): 140735835
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Entry
140735835 CDS
T11019
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140735835 (rbbp6)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140735835 (rbbp6)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
U-box type E3
140735835 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
140735835
NCBI-ProteinID:
XP_072917446
LinkDB
All DBs
Position
11:92166193..92256771
Genome browser
AA seq
1783 aa
AA seq
DB search
MSCIHYKFSSKLNYDTVTFDGLHISLSDLKKTIMAREKLKAADCDLQITNAQTKEEYTDD
NTLIPKNSSVIIKRIPIGGVKSAGKSFVIDRFEPTSGTSKAIDDSGTSISLAQLTKTANL
AEANASEEDKIKAMMTQSGQEYDPVNYMKKPLGPPPPTYTCFRCGKPGHYIKNCPTNGDK
NFEAVPRIKKSTGIPRSFMVEVDDPNMKGAMLTNTGKYAIPTIDAEAYAQGKKEKPPFLP
EEPSSSSEEEDPIPDELLCLICKDLMNDAVVIPCCGNSYCDDCIRTSLLESDEHTCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRTRKQQLTQQHQRLASHQLQNQQPSLRPLP
PINPQAALPLTRPAISKSVDVPVTNVSGHVSVPVSLPNAASVPVRASSPVKVNRDTSAAS
IPAPDVLTASVHFHRLPSKHEEGDIPEIGKSTVTVTSGITTANPSMPTSSTSALKGYQVP
VLGHPASHGQSIPTTVQPMRSSSVRPPGNRSGWEISSNRGHQSDRVPRSRTQAIANPPPV
YVPPPTLYPPPPHPVPLPPGVPPPQFPPQFPPGQPPPTGFTVPPPGFPPAQATISAPWIP
PATPSAPASVIPTVTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYRKIQ
KERRRSYSRSRSRSYSGSSFSGSSYSYSKSRSHSSRSYSRSVSRSPSRSYSRSPSYRRGS
GKNRGYRSRSRSRGFHRSRSRSPSYRGYRSRSRSPNYKPHSPYKRSIPQSENDREYYDRY
REPLPPFDYRELYDRPRDPRDAFERERYREWERRCRAWYEYYKGYNGGNQPRPRSPTSKD
HFSPERFVLPGPRRDNSPHVRSRRDEYAAEQLSRGRNLGGANNYPEKYSYRESHSGKELR
GSKEKEATVSLRPDSKSAKHKKHRKRKKDETESVSNLMSSREGKKAVETTGDDSKGSSLF
LPPCRDDATPVRDEPMEGDSVAYKTPSDKDRKEKSKSKVEKMKRKAESSMPKKESSGKTT
KAPQEKPLEKEREKSPHNEPSIKKYREECPSKVESVKIQPLPKSEKFFLPRKLQLKMGRE
YKEMKTAKEEKQKKDYPREETKHEKTVSREEKFKTTVKADDKPGKAEAKADKRKRKNDEK
VTDRELGTPPTKSSKVEMQEATKPSTKLKSTSATEKATGNLAELSCENEKVTPTNLPVRK
IKINRESGKKIVSGESPAAQEEVSELLELNGGKSKSDKVKSKARRRVAGSETVASVLVDY
TSTSSAGGSPIRRAEEKLDAKKTVIKTMEEYNSDTRPPAEDEIVIVQVPRSKWEKEDYET
DEDEGKAAAALNAGKPNSSGQGVKTANPAKQTEKDVVFVERVPKTTKELTMEEAQQEAKP
PGKSYVLNEKSARTKDKEHVMSDREILEKKKAAIQLDKPTVTERVIEVASGKNPPTKEHQ
TEKLEPGSRGALNKDLLADVDSKMDGNNRHGSTNKQKEERSRDTRRRVSPSKCEELTYVQ
KGREQHTESRRGNTEPRKIDHNAEKDKKSQTDHRSGSECISGSEEARSIPFNRGKEKHIF
ETRSNKDSEVSGNKVPHQTEESAEKNEQDLSLSRGEKDHSRSRLPGSLSRSSRLLRHSLD
VARETDEAAFEPDYSESDSETEAELNDGNDTKEITDEPKEVTAVSAGSRNSGTKSHTQSS
PSPSCSRSYSPSESQTRSHSSSASSEDTQDSKKKKKKKEKKKHKKHKKHKKHKKHLGVDS
EPDKTQKHKHKKKKSKKSKDKDKDKESDQKVRSSVIVRTAETD
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtatacattacaaattttcttctaaactgaactatgacacggtcactttcgat
gggcttcacatttctttgagtgatctaaagaagacaataatggcccgagagaagctgaag
gcagcagactgcgatttacaaatcaccaatgcacagacgaaggaagaatatacagatgat
aatactctaatacccaagaattcatctgtcattataaaaagaattccgattggaggtgtg
aaatccgctggcaaatcatttgtcatagatcgttttgaaccaacaagtgggacatcgaaa
gcaattgatgactctggaacctctatctcactggcccagcttacaaagacggccaatctg
gctgaagctaatgcctcagaggaagataaaattaaggcaatgatgactcagtctggtcaa
gaatatgatccagtcaattacatgaagaaacctctgggtcctccacctccaacgtatacc
tgttttcgttgtggaaaacctggtcattacattaaaaattgcccaactaatggggacaaa
aattttgaagctgtgccaaggattaagaagagcacaggcattccccgcagtttcatggtg
gaagttgatgacccaaatatgaagggtgcaatgctgaccaacacagggaaatatgctata
cccacaattgatgcagaagcatatgcacaaggcaaaaaagaaaagccaccattcctgcca
gaggagccctcatcttcatcagaagaggaagatccgattcctgatgaactgttgtgcctt
atctgcaaagatcttatgaatgatgctgttgtcataccatgctgtggaaacagttactgt
gatgactgtatcagaacatcactgcttgagtctgatgaacacacttgccctacttgccac
cagacagatgtttctcctgatgctttaattgcaaacaaatttttaagacaggctgtcaac
aacttcaaaaatgaaactggctatacaaaaagaactcgtaaacagcagctgacccagcag
catcaacggttagcttcccatcaattgcaaaatcagcagcccagcttgaggccattgcct
cccatcaaccctcaggctgctttgcccttaaccagaccagccatctcaaagtcagtggat
gtgccagtcaccaatgtttctgggcatgtttctgttccagtctcccttccaaatgcagcc
tctgtcccagtacgtgcttcttcgcctgtgaaagtgaatcgagatacctctgctgcaagc
atccctgctccagatgttttgacggcttctgttcattttcatcggttaccttcaaaacac
gaggaaggggacattcctgaaattggcaaatcaactgtgactgttacttctggaataaca
actgctaatccatccatgcctacaagcagtacttcagcacttaagggttatcaggttcct
gttcttggtcatcctgcttcacatggacagtccatacctacaacagttcagccaatgaga
tcaagtagtgttcgaccaccaggaaacagatcaggttgggaaatatcatccaacagaggg
catcagagtgatcgcgttccacgaagtcggacacaggcaatcgcaaaccctccccctgtc
tacgtgcctcccccaaccctgtaccctcctccacctcacccagttcctcttcctccaggc
gtacctccccctcagtttcctccacagtttcctccaggccaaccccctcctacaggattt
actgtccctcctcctggattccctccagcacaggctacaatatctgccccatggatacct
cctgctacaccatcagctcccgccagtgtcatacctactgtcacgcaagcacctccactg
tccagggaggagttctaccgggagcaacgacggctaaaggaagaagagaagaaaaagtcg
aagcttgatgagttcacaaatgactttgctaaagaattaatggagtacagaaaaatccaa
aaggaaaggcgacgctcctactccaggtctcgatcacgttcatatagtggatcatcgttc
agtggcagctcttactcatattccaagtcaagatctcattcctcacgatcatattctcga
tcagtcagtcgatctccaagtcgttcctattcgaggtcaccttcatatcgacgaggcagt
gggaagaatagaggctatcgatcaagatccagatctcgtggatttcatagatccaggtcc
aggtcaccatcttacagaggatatcgctcccgctcccgatctccaaactacaagccccat
tctccttacaaaagaagtatccctcagagtgaaaatgatcgtgagtattatgatcgttac
agagaaccattaccaccatttgactacagagaactttatgatagacctcgtgatccaaga
gacgcttttgaaagggagcggtacagagaatgggagaggcgatgcagagcatggtatgaa
tattataaaggatacaatggtggtaatcaaccacgacctcgttctcccacaagtaaggac
catttctctcctgagcgttttgtcctacctggccctaggcgtgataattcacctcacgtt
cggagtcgcagagatgaatatgcagcggaacagttatcacgagggcgtaatttgggaggt
gcaaacaattatccagaaaagtactcttacagagaaagtcattctggaaaggaactgaga
ggatcaaaagaaaaggaagcaacagtaagccttcgccctgactcaaaaagtgcaaaacac
aaaaaacacaggaagaggaaaaaagatgaaactgagtcagtcagtaacctgatgtcttct
cgagaaggaaaaaaagctgtcgagactactggtgatgacagcaaagggtcttccttgttt
ctgcctccttgcagagatgatgccacacctgtgagagatgagcccatggaaggagattcg
gttgcttataaaactccgtctgacaaagacaggaaagaaaaatcaaaatcaaaagtggaa
aagatgaagcggaaggcagagagtagcatgccgaaaaaggaatcctctgggaaaaccaca
aaagctccccaagagaagcctcttgaaaaagagcgggagaaatcacctcacaacgagccc
agcattaagaaatacagggaggaatgtccttccaaagttgaaagtgtgaaaatccaaccc
ctgccaaaaagtgaaaagttctttctgccaaggaagctgcagctcaaaatgggaagagaa
tacaaagaaatgaaaactgcaaaggaggaaaaacaaaagaaagattatcccagagaggaa
acaaaacatgagaaaactgtgagcagagaggaaaaatttaaaacaacagtcaaagcagat
gataagccaggtaaggcagaagcaaaagctgacaagcgtaagcggaaaaatgatgaaaag
gtgaccgacagagagcttggaacacctccaactaaatcatcaaaagtggaaatgcaggag
gcaacaaaaccttcaacaaagctgaagtccacatctgctactgagaaagcaacaggaaat
cttgcagaattatcttgtgaaaatgagaaagtcactccaacaaatttgccagtgaggaag
attaaaataaatagggagagtggcaaaaagattgtgagtggggaatccccagctgctcag
gaggaggtttccgagttactggaattaaatggtggaaaatccaaatcagacaaagtgaaa
agcaaggcgaggaggagagtggcgggcagcgagaccgttgcttctgtcctggtagattat
acaagcaccagttctgctggagggagccccattaggagagctgaggagaagctggatgca
aagaaaaccgtgatcaagaccatggaggaatacaacagtgataccaggcccccagctgaa
gatgagattgttattgtccaagtccctcggtccaagtgggaaaaggaggattatgagact
gatgaagatgaaggaaaagcagcagctgcactaaacgctgggaaacctaacagttctggg
caaggtgtaaagactgccaacccagcaaagcaaactgagaaagatgttgtttttgtagag
agagttccaaaaactactaaagagctgaccatggaagaagctcagcaggaggctaagccc
ccaggtaaaagctatgtgctgaatgaaaaatctgcaaggactaaagataaggaacatgtt
atgtctgacagagagattttggagaaaaagaaagcagccattcagctagacaagccaacg
gttactgagagagtgattgaggtagcaagtggaaagaatccacctacaaaagagcaccag
actgaaaaactggagccaggtagccgaggtgccttaaacaaagacctgcttgctgatgtt
gacagtaagatggatggcaacaacaggcatggctcaaccaacaagcagaaagaggaacga
agccgagatacaagaaggcgagtctcccccagtaagtgtgaagaactgacatatgttcaa
aagggacgagaacaacatacagagagcagaagaggcaatactgagcccaggaaaatagat
cacaatgctgagaaagacaagaaatcacagacggaccacagaagtgggtcagagtgcata
agtggcagtgaagaggcaagatcaatcccttttaaccgaggcaaagagaaacacattttt
gaaaccagaagcaataaggacagtgaagtaagtgggaataaggtgcctcatcagactgaa
gaatcagctgaaaagaacgagcaggatctttctttgagccggggtgagaaagatcacagc
cgttccagacttccaggatcccttagtcgttcctcccgattattacgccattccttggat
gtagccagggaaacagacgaggctgcctttgaaccagattacagtgaaagtgacagcgaa
actgaagctgagctaaatgatggaaatgacacaaaagagattacagatgaaccaaaggag
gtcacggctgtgtctgcaggttccaggaacagtggaactaaaagtcacacccaaagcagc
cctagccccagttgtagtcgcagctacagccctagtgaaagtcagacacgcagtcacagc
agcagtgcgagctcagaggatacacaggacagcaagaagaagaagaagaaaaaggagaaa
aagaagcacaagaagcacaagaaacacaaaaagcacaagaagcaccttggggttgactca
gagcctgataaaactcagaaacacaaacacaaaaagaaaaagtccaaaaaaagcaaggac
aaggataaagataaagaaagtgaccagaaggtcagatcttctgtcattgtgcgaactgca
gaaacggattag
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integrated database retrieval system
