Hemitrygon akajei (red stingray): 140736038
Help
Entry
140736038 CDS
T11019
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140736038 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
haka04990
]
140736038 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
haka04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
140736038 (pdlim2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
LIM
PDZ_6
PDZ_2
zf_C2H2_13
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
140736038
NCBI-ProteinID:
XP_072917842
LinkDB
All DBs
Position
1:complement(219204794..219240256)
Genome browser
AA seq
357 aa
AA seq
DB search
MSRSVTLPAPGPWGFRISGGRDFNKSISVSKVVAGGKADQVQLKPGDVITTINGAETSEM
INMEAQRQIKQCQGDLVLGIERPESNALNGSPTDTFVAQRFQAVLHVGEDESQNSRRSSP
SRSPAISPTAELQPASQGVSWRSASPVSSQWRPIERSPSPVDLALKVKDVPPGPGQRRSL
SPAHSSQPDPRLTRSAESSPRETRSPVARSLSPSPVLVNKGTTEHRPLNRIDKDSEVYKM
LQENRTAKEPPRQSARFRQLQEALDTDQEAAAAQFPGRLSPSAPRSVASRYRVCEKCGSS
ILTEAVKIRDGCYRHQECYICTDCGLNLGMRGHFWVHDEMFCEKHARERYQAAEGSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctccgtcaccttaccggcgccaggaccctggggattccgcattagcggcggc
cgcgacttcaacaaatccatctccgtgtccaaggtggtagcggggggtaaagcggaccag
gtgcaactgaagcccggagatgtgatcaccaccatcaatggggctgagacgtcagaaatg
atcaacatggaagcgcagagacagattaaacagtgccagggagacctggtccttggtatc
gagaggccagaatcaaacgcgctcaatggatctcccacggacacatttgttgcacagaga
ttccaggccgtccttcatgtgggagaggatgagagccagaactccaggaggtcaagtccc
agcaggagcccagccatatcgcccacagctgaactacagcctgcatctcagggcgtgagc
tggaggtcggcgtccccggtctcgagtcagtggaggccgattgagagatctccatcccca
gtggatctggcactgaaggtgaaggatgtcccgccaggtcccggacagcggaggagcctc
tcgcctgcccacagctcccagcccgaccccaggctaacccggtcggcagagtccagcccc
cgagagacaaggagtcctgttgccaggtcactctcgcccagcccggtgttggtgaacaag
ggaaccacagaacaccggccactcaatcggatcgacaaagactccgaggtgtataagatg
cttcaggaaaaccgcacagcgaaggagccacctcgacagtctgctcgcttccggcagctt
caggaggcactggacactgaccaggaagcggccgcggctcagtttccgggcagactgtcg
ccctctgccccacgctctgtcgcttccaggtaccgcgtgtgtgagaagtgcggctccagt
attctaacggaagcggtgaagatccgggatgggtgttatcgtcaccaggaatgctacatc
tgcactgactgtggcctgaaccttggcatgaggggccacttctgggtccacgacgagatg
ttttgcgagaagcatgcacgggagcggtaccaagctgccgagggaagctcgtga
DBGET
integrated database retrieval system