Hemitrygon akajei (red stingray): 140736150
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Entry
140736150 CDS
T11019
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140736150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140736150
03036 Chromosome and associated proteins [BR:
haka03036
]
140736150
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140736150
Coactivators
SAGA/TFTC/STAGA complex
140736150
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140736150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
140736150
NCBI-ProteinID:
XP_072918079
LinkDB
All DBs
Position
11:153772574..153886862
Genome browser
AA seq
1108 aa
AA seq
DB search
MAAGASDLLDDMFLSDVDEKVVSDLVGSLESQLAATGHNAAEQARIRAQVVNNHVENTPG
MVSNNVELQAAENKMGLAGAELSTAAKIKVEESSEGKTVQINSQNAFGGGVLPCTTAGSG
VQQSAVINNARSQASGVEQEQSTAAAAVTGSSAETSASGNIGQGKSVVISAMATPVSNHV
KTVTSNVQTLNGNNGMVINSHNAGNAATFTYSAAATTLPAVTMVNNGPGSVVKNTINAGS
PAASMPASSSAYTVIQTTFVSTQNVPSTVVSSQTAGPTVTLVRPPPHGGPALSVASTPNG
SSTILNSTVSVTNLPAPAATGAPHQTSLLTLNSQPSSLSSNVSLTAGGQVIKSDLQPKTI
IQPPQQTLSSGILTSTTGSASSSVNNQSNTSTMVIGQTIQSGLQNVASNPGGISSQSAGM
GKGTISTVAQTLTRTAAVSTGPRTTITPQIIAPRLPQPTQHQPNIQNIQIPPGMVLVRSD
SGQLMLIPQQALQQMQSQAQSQGALTSRSATPTSAPPVQISTVQAPGTQIIARQVTPTII
KPVSQTQTAVQVTTALQRPPAVQSQIVISGATSAASIGTATTVQPGTPQRTVQTLTAATG
APTSQILQPTASAETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIDA
EDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTQDSQAFIQQSQQQSSTPTTTALTAVV
LGNTVQQRPVVRTTTSTATVTSTLQHPVLSLAQPGQSVQAGKVFQQQQGTLARPQVTLTQ
TPMVTLRQPHNRIMLTAPSQVQLKQLQTVPVMKPTVVPGSKAGLTYSVQTSVVQKNKLKE
AAAAAAGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDEAFLFSAPL
HRRMLEIGKKHGITDVHPDVVNFVSHATQQRLQTLVEKISEVAQQRNITYKEDDRYEQLS
DVRSQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQ
MRQREANLTALAAIGPRKKRKVDSPVPGIGAGAEGPSTGGTPGGSGVGTTRQFTRQRITR
VNLRDLIFCLENERETSHSLMLYRAFLK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggggcttcagatctgttggacgatatgttcctctcagacgtggacgagaaa
gtggtgagtgacttagtggggtccctggagtcccagttggcggctacgggccacaacgcg
gcggaacaggcccgaataagggcgcaggtggtgaataatcacgtggaaaacacacccggg
atggtgagcaataatgttgagctgcaagcagcagagaacaaaatgggactggcaggagca
gagctttctaccgcagccaaaatcaaagtggaggagagctccgaagggaaaaccgtgcag
attaattcgcagaatgcatttggcggcggggttttgccctgcacgacggcggggagtggg
gtacagcaaagtgctgttatcaataatgcaaggtcccaggcttcaggagtggaacaagag
cagagtacagcggcggcagcagtgacaggatcatcagcagaaacatcagcttcgggcaac
atcggtcaagggaaatccgtggtaataagtgcgatggcaaccccagtgtccaaccatgtg
aaaactgtcacctccaatgtacaaactcttaatgggaataatggaatggtgataaactct
cacaatgcaggaaatgccgccactttcacttattcagcagcagcaactaccttgccagcc
gtcacgatggtcaataatggacctggatctgttgttaaaaacacgattaatgcagggtct
ccagcggcatccatgccggcctccagttctgcttatactgttatccagacgacttttgtc
agtacgcagaatgttccttcaactgtcgtttcctcacagactgcaggacccaccgtgaca
ttagtgagaccaccacctcacggtggcccagctttgtcagttgcatcgacgccgaacggt
agtagtactattttgaactcaacggttagtgtaactaacttgccggctcctgctgccact
ggggctccccatcagacttcacttctgactttaaatagtcagccttctagtttgtcaagc
aacgtgtctttgactgctggtggacaggttattaaatccgatttacagcccaaaactatt
atacagccaccacagcagactctcagttcgggaatattgacatcgacaactggtagtgct
tcctccagtgtaaacaatcagtcaaatacaagtactatggtaataggtcagactatacaa
agtgggcttcagaatgtggcatccaatcctggtggaatttcctctcagtcagcaggaatg
ggcaaaggaaccattagtacagttgcccaaactctaacaaggacagcagcagtgagcact
ggcccaaggacaactataacaccacaaattatagctccccgactccctcagcccacacag
catcagccaaacattcaaaatattcaaattcctccaggaatggtccttgtgcgtagtgac
agcgggcagttgatgctgattccccagcaagctctgcagcagatgcagtcacaagctcag
tctcaaggggcactcacttcacgatctgccacacccactagtgctcctccagttcagatt
tcaactgtacaggcaccaggaacacaaataattgcacggcaagtaacacctacaatcatc
aaaccggtttctcaaacacagactgcagtacaagtgacgacagcacttcagcgacctcca
gctgtacagtctcagattgtaataagtggagcaacatctgcagcctctatagggacagca
acaacagttcaaccaggaacaccacagagaactgtgcagacattgacagcagccacaggt
gctccaacgtcacagatactgcaacccactgcgtcagcggaaacaatggaaaatgtgaag
aaatgcaaaaattttctgtctacgttgatcaagttagcttcaagtggtaaacagtcaact
gaaacagctgccaatgtcaaagaactggtgcaaaatttattggatgggaaaattgatgct
gaagactttacaagccggttatatagagagctcaattcatcacctcaaccataccttgtg
cctttcctgaagcggagcttgccagccttgcgccaactcactcaggactcgcaggctttt
attcagcaaagtcaacaacaatcctcaactccaaccacaacagcattgacggcagtggta
ctaggaaacactgttcagcagcggcctgtagtacggacaactacttctacagctacggta
accagcaccctccaacatccagtgttaagtctagcacaacctggacagtcagtacaagct
ggcaaggtgtttcaacagcagcaaggaacgctagccagaccgcaagtgactctgacacaa
acacccatggtaacacttagacaacctcacaatcgcatcatgttaactgcaccttcacag
gtgcaattgaagcaacttcagacagttcctgttatgaaaccgacagttgtgccaggaagt
aaagctggtttgacttattctgtccagacgtcagttgttcaaaagaacaagcttaaagaa
gcagcagcagcagcagcaggcggttctttcagggatgatgatgacattaatgatgtggca
tctatggctggagttaatctgtctgaagaaagtgcacgaattttggcaacaaattcagaa
ttggtgggcactctgacaagatcatgtaaagatgaagcattcttgttttctgcgccattg
cacagaagaatgttagaaataggtaaaaaacatggaattactgatgtccatcctgatgta
gtaaattttgtgtcgcatgccacccaacagagattacaaacacttgtagaaaagatatct
gaagttgcacagcaaagaaacatcacatataaggaggatgacaggtacgagcaattaagt
gatgtaaggtcacagctgaagttctttgaacaactggatcaaatagaaaaacagagaaaa
gatgagcaagaaagggaaattctaatgcgagcggcaaagtctcgctccagacaagaggac
cctgaacaactaaggctaaaacaaaaggccaaagagatgcaacaacaggaactggctcaa
atgagacagagagaagccaatttaactgcgttagctgccattggtcccagaaagaaacgg
aaggttgattcaccagtaccggggattggagctggggcagagggacccagtacgggcggg
acaccaggtggctcaggagttggaacaaccagacagttcacaagacaacgaataacaaga
gtcaacctcagggacctcatcttctgcttggagaatgagcgtgagacaagccattcacta
atgctataccgtgcattccttaaataa
DBGET
integrated database retrieval system
