Hemitrygon akajei (red stingray): 140736171
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Entry
140736171 CDS
T11019
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140736171 (dhx35)
Enzymes [BR:
haka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140736171 (dhx35)
Spliceosome [BR:
haka03041
]
Complex C
Other components
Complex C specific factors
140736171 (dhx35)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
Cas3-like_C_2
UPF0203
AAA_19
Motif
Other DBs
NCBI-GeneID:
140736171
NCBI-ProteinID:
XP_072918136
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All DBs
Position
11:complement(158787991..158894295)
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AA seq
701 aa
AA seq
DB search
MAAPMSAPKFWKPGTEGPGLGISEERISSAEASGTTVIYNRYASLSIEQQRQKLPIFKHR
NHILYLVENYQTLVIVGETGCGKSTQIPQYLLEAGWTAEGRVIGVTQPRRVAAVSVAGRV
AEERGALLGHEVGYCIRFDDCTDSQATRIKFLTDGMLVREMMADPLLKKYSVLLLDEAHE
RTLYTDVALGLLRKIQKKRGNLRLIVSSATLDAEKFRNFFNLNETADPSKDTCAILTVEG
RMFPVDIFYTLSPVPDYLKATVDTITKIHQNEADGDILAFLTGQEEVEMVVSMVIEQARA
LSRSGMKKHLRVLPMYAGLPSSEQMKVFERMSPNCRKIVVATNVAETSITINGIVFVIDC
GFVKLRAYNPRTGIESLVVTPVSQASAAQRAGRAGRNRSGKCYRLCTEETFEKLPESTVP
EMQRSNLAPVILQLKALGIDNVLRFNFLSPPPAQSMVQALELLYALGGLNDQCFLTDPLG
LRMAEFPLSPMFAKMLLESGNFGCSQEILTIAAMMQIQNVFLVPPNQKSAAAREHRKFAV
AEGDHLTMLNVYEAFIKHNKNSQWCQKHFLNYRGLVRATVVREQLKKLLSKFRVPKKSSE
GDPDPILRCIVSGFFANAARFHYSGFYRTIRDDYELHIHPTSVLYGEKEPQWVVYNEVIQ
TSKYFMRDVTAVESSWLIELAPHFYQQKTSISQMAKKSRVT
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccatgtcagctccgaagttttggaaaccaggcacagagggtcctggtctg
ggtatatctgaagaacgaatcagttctgcagaagcgagtggaaccacagtgatttacaac
cgatatgcttccctctccatagagcagcagaggcaaaagctgcctatctttaagcacaga
aatcatatcctgtacttggtggagaactatcagacattggtgatagtaggtgaaacagga
tgtggaaagagcactcagattcctcagtatctgttagaagctggctggactgcggaggga
cgagtgattggtgtgacacagcctcgcagggttgctgcagtttcggtggcaggccgagta
gcagaggaacgaggggcattgttgggtcatgaggttggatattgcatccgttttgacgat
tgcacagattcgcaagccaccagaataaagttccttacagatgggatgctcgtcagggaa
atgatggctgaccctttactgaagaaatatagtgttctcctcctggacgaggcccatgaa
agaactctgtacacagatgttgctcttggcttactaagaaagattcagaagaaaagaggg
aatctgcgactgattgtgtcatctgcaacactggatgctgagaaatttcgaaatttcttc
aatctgaatgagactgcagaccccagtaaggacacgtgtgccatcctcactgtggaaggt
cggatgtttccagttgatattttttataccttaagccctgttccagattatctgaaagcc
acagtggataccatcacaaagatccaccagaatgaggctgatggggatatcttagcattt
ctcacaggccaggaggaagtggagatggtggtttccatggtgatagagcaggcccgagct
ctttctcgcagcgggatgaaaaagcaccttcgcgttcttcctatgtatgcagggctgccc
tccagtgaacagatgaaagtctttgaacggatgtctcccaactgcaggaagatagtggtg
gccacaaatgtagcagaaacctcaatcactataaacggaatagttttcgtcatcgactgc
ggctttgtgaagctgcgggcctacaatcccaggacaggtatcgagtctcttgtggtaact
ccagtctcccaggcatctgcagcccagcgagcaggacgtgctggtcgaaaccgctcgggg
aagtgctacagattgtgcacagaggaaacatttgagaagcttccggaatccacagtgcca
gagatgcagcgcagcaaccttgccccagtcatccttcagctgaaagcactgggcattgac
aatgtgctgaggtttaattttctgtctcctcctccagcccagtcaatggtccaggcccta
gaactgctttatgcactaggaggtttgaatgatcaatgcttccttaccgatcccctcggc
ttacgcatggctgaatttccactgagtccaatgtttgccaaaatgctgctggaatcaggg
aattttggatgttcacaggagatcttgaccatagcagccatgatgcaaatacaaaatgtg
tttctggtgccaccgaaccagaaaagtgctgcggcaagagaacacaggaagtttgctgta
gcagagggagatcatctcacaatgctcaatgtctacgaggccttcattaagcataataaa
aactcccagtggtgccagaagcacttcttaaattatagaggacttgtgagagccacggta
gtccgagagcaactgaaaaagttactgtccaaattccgagtgccgaagaaatcaagcgaa
ggtgatccagatcccatcctccgatgtattgtttcaggattctttgcaaatgcggctagg
tttcattacagtggattctacaggacaattcgagatgattatgagctccacattcatcca
acatctgtactgtatggcgagaaggagccacagtgggttgtgtataatgaggtcatccag
acttccaagtactttatgagggatgtgactgcagtcgaatcttcatggctaatagagtta
gccccgcacttctaccagcagaaaacttccatttcccagatggcaaagaaatctcgagtt
acctga
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