Hemitrygon akajei (red stingray): 140736232
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Entry
140736232 CDS
T11019
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140736232 (rbm39a)
Spliceosome [BR:
haka03041
]
Common components
Common spliceosomal components
General mRNP proteins
140736232 (rbm39a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
PRP38_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
140736232
NCBI-ProteinID:
XP_072918250
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All DBs
Position
11:164454335..164493075
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AA seq
570 aa
AA seq
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MSIQPGWQSGNMADDLDIEAMLEAPYRKEDENKSSKANGQEERSKKKKKSRSRSHSRERK
RSRSRERRRSKDRERRRSRSRERKSSKSRDHRRSRSKDRRRVERGRYRSPFWEKRLISGP
KFSSGSSSRGKIGMQPGIKISRRRSRSRSPHKKDKSPVREPIDNISPEERDARTVFCMQL
AARIRPRDLEEFFSSVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQKLLG
VPIIVQASQAEKNRAAALANNLQKGTAGPMRLYVGSLHFNITEEMLRGIFEPFGRIENIQ
LMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTERSDSSNASSFLD
SDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGNISLGTMAAVTEQGDVW
SRVVLGEPKLNINEQVIDLQTRIIQQTEALNPPVTVNAPPIATQCFQLSNMFNPQSEDDP
AWDQEIRDDVIEECNKHGGVIHIFVDKNSPQGNVYVKCPTIAAAAAAVGALHGRWFAGKM
ITAAYVPLPTYHNLFPDSMTTTQLLTPARR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacaaccagggtggcagtcaggaaacatggcagatgacttggatattgaagca
atgttggaggcaccatacagaaaggaggatgagaacaaatcgagcaaagccaatggacaa
gaggaacgtagtaaaaagaaaaagaagagccgaagtcgcagtcacagccgtgaaaggaag
agaagtagaagcagagagcgtagacgcagcaaagatcgagaaaggaggcgaagcaggagc
agagagagaaaaagcagcaagagcagagaccatcgtcgcagccgaagcaaggaccgccgg
agggtagaaagaggccgttacaggagtcctttttgggagaagcgacttatttctggtcca
aaattcagcagtggtagcagcagcagagggaagattggcatgcaacctggtatcaaaata
agtcgaaggcgctctcgaagcagaagccctcataagaaggataaaagtccagtaagagag
ccaattgataacatttcacctgaagaacgagatgcccgcacagtcttttgtatgcagcta
gcagcacgaattcgacccagagacttggaggaattcttttcttctgtaggaaaggttcga
gatgtaagaatgatatcagataggaactcaaggcgctcaaaaggaattgcttacgtagag
tttgtcgatgtgagttctgttccactggcaataggtttgacaggacagaaactgcttggt
gtgccaattattgtgcaggcttcacaggctgagaagaaccgagctgcagcccttgctaac
aacctccagaaaggtactgcaggaccaatgaggctctatgtaggatctttgcacttcaat
atcactgaagaaatgttgagaggaatttttgaaccctttggtagaattgaaaatatacaa
ctgatgatggatagtgaaactggccggtcaaaaggctatggattcattacgttttctgat
gctgagtgtgcaaagaaggctctggaacaattgaatggttttgagcttgctggtaggcca
atgaaggtcggccatgttacagaacgatctgattcttctaatgccagctcattcctagac
agtgatgaattggaaaggactggtattgaccttggaacgacaggacgtctacagctgatg
gctagactggcagaaggtacaggactgcaaattcccccagctgcacagcaggctttgcag
atgagtggcaacatttcactgggcacaatggcagcagtaacagagcaaggcgatgtctgg
agccgagtagttctgggagaacccaaactgaacatcaatgaacaagttattgatttgcag
accagaattatccaacagactgaagcgctgaatcctcctgtgacggtgaatgccccacca
atagcaacacagtgtttccagctgtccaacatgtttaacccacagtcggaagatgatcca
gcttgggaccaagaaatcagagatgatgtaattgaagaatgcaacaagcatggaggagta
attcacatatttgtagataaaaattcaccccagggaaatgtctacgtgaaatgtcctact
attgctgctgctgctgcagccgttggcgccttacacggaaggtggtttgctgggaaaatg
atcaccgcagcgtatgtgccacttccaacctatcacaacctcttcccagactcgatgaca
accacccagctgctgactccagcaagacgatag
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