Hemitrygon akajei (red stingray): 140736292
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Entry
140736292 CDS
T11019
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140736292 (chd6)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140736292 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
140736292
NCBI-ProteinID:
XP_072918363
LinkDB
All DBs
Position
11:172051956..172402202
Genome browser
AA seq
2761 aa
AA seq
DB search
MACFLMGADTALAYPSEVRYQPSTSKTSKQPLIPSASPVGEHALQLSHSSTKDQPSPYSP
ASSPEAAGHLIETSSKKVVHGTQLEVSVDQPLPLTKAEDVSTGVKKKRKKKEPKEEAGGE
TVTDAPKPKKKRKEPKGDKETKEGKGAKEPKGSKGSRNRGEPKEPKGTKGAKELKESKGA
KELKQLREPKCKSNTTPKSKSSKKASKEQGPTPTEKKKKGKRKNGVPVENSEQEHSAEKA
PLATEELTDAQKRRSGRQVKRRKYNEDLDFKVVDDAGETIAVLGTGRISPNSGSSQKGNQ
TTESQEEDESAVIEKILAQRITQRETPDGTTQEVEEFYVKYRNYSYLHCKWATVEELQKD
KRIHQKIKRFRAKQAQMKNLFVEPDEEPFNPDYVEVDRILDVAHTIDSETSEPVTHYLVK
WCSLPYEESTWELVEDIDPVKIQEYEELQIVPEITHVERPPAETWKKMELSRPYKADNRL
REYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIYLMGIRGPFLIIAPLSTI
ANWEREFRTWTEVNVIVYHGSQISRQMIHQYEMHYKDSEGVPIQGIFKFNAIITTFEMIL
ADCPELRKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNTVEELFSLL
NFLEPVHFPSESTFMEEFGDLKTDEQVKKLQAVLKPMMLRRLKDDVEKNLAPKEETIIEV
ELTNIQKKYYRAILERNFSFLAKGANQANMPNLLNTMMELRKCCNHPYLINGAEEKILDE
FREVHNPEAPNFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIH
RRYTYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDW
NPQNDLQAQARCHRIGQSKAVQVYRLITRNSYEREMFDKASLKLGLDRAVLQAMNRRGNT
NGVQPLSKIEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTRTITIESEGKGSTF
AKASFVASGNRTDISLDDPNFWQKWAKIAELDIESKNGKDSLVIDTPRIRKQTKHYNSFE
DDELMEFSELDSDSEDKPSRSRRLHDKTRRYLRAECFRVEKNLLIFGWGRWKDILSHGRF
KWHLTEKDMETICRTLLVYCLKHYKGDEKIKSFIWDLITPTKDGQNQALHNHSGLSAPVP
RGRKGKKMKTPLSQPELKNADWVASCNPEVLFHDDGYKKHLKQHCNKVLLRVRMLYYLKQ
EVLGEAADKALDGIDASKLEVWIPEVDYNDIPVDWWDGDSDKSLLIGVYKHGYERYNAMR
ADPALCFLERVGMPDETSLAAEQGGVDLSADMSEGVDLCKGEDSELKSDGQFKDQPDEDA
NSCIESAIMEKGEDSILGQDGTDIDRPQWPVASVLTARLRRLITVYQRCNRKELVRMESL
ARNNQRRWYRQDEIWGRIPEMDIINMEVQQRWTRREQTDFYRVVSTFGVVYDPDKKQFDW
NQFRSFARLERKTDGSLERYFRSFVAMCRNVCRLPQRKDEASDPNIFVEPITEERASRTL
YRIELLRKVREQVLRSPQLNERLKLCRPSLYLPVWWECGKHDRDLLVGTAKHGLSRTDYY
ILNDPQLSFREAHRNYVQNGSTYFQSVPAPCSQSSLNFSQSASPASTVLTLGEKDNIEQM
DVEQEKMEEALNDSSSQAGIMGDCSEVKNEENAADSGTKCSSAQADLVVVGNDWVAVNCT
QTKCYTVPKAHAKEVNDTGGICAEADAVESSQQPVLEPCSGAVPTLVRNLQPVCAGVALS
PVNCVNVLQVKSNGVIEMQPVGEEPVDSSAPVCGAAGMQSLLEAAHGTTLKCNLIQNMQI
KEENECIVAQRSTGVTDGESPMSEHIYNMQIDCPSMCHTETTTNCTDKMWSQASQMAESN
SSAAVPTSSGAANGFKLTEVVSGSSQQGVAVGEANSAESVGILTVAKAESDQLDFEAVTT
KSLLSRTQSLGTVYSAVKAAEDEPESSSAPEGTVPLKRELTVRHLLEDCTKDSLCETEEK
SEEDNSQPEAIPLKNFDEESNTSTSLVQDEIQDTLLHDIREPTIAQLLQEKTLYSSAEWP
KDRVIINRIDNICHAVLKGKWPSAQQQNLEPAGVMYSMAAPAETLNVRSCLSVPLQAAHT
LSFADSSVSSHHFAKQESLLALTFPRDQRRRRRKYEFETDRGAKRKSQEEAVPVLTRSPI
IFNGWQETAMDLSKASEEAPGSVPVIISTSTPKLGSLDPSTAFRADMAGILQAGLVHPVT
GQVINGTCRGDDSSRRRRGRRKNVEGVDILFMKEKKPENLDTGLSKQLFSGAAHSADNMA
SMMIKLPQGKQQLANEEEEKNKSLIEWLRQHPTYTMDVSNLAPNCTAILHGLSERPKQRR
HRCKDPSKLDINSLTGEERVPVVHKGSGRKLGGAMAPLMKELARWLDANPEYAVAPEWAE
IVKHSGFLPENKFSRILTEPVVKEAGARKRGRRPRSEMVKPGGVVGDTTSAMGPMFMNGL
IAGMDLVSLQNFRNIHNLQLAGLMGFPAGFAAIPSGEDGKNSLNMLPMMLPGMAGMSHVF
GVGGLLNSPSVVSGTSTSCTSTLTTSVSSKASKGSEQQGSAAESRKHEEGSLSAEKPGPS
TSFPDSGEARVTTSNVLPFNPFLLHSMPAGLIYPSMFLPHGVGMAMPGFAQAGHTEGDST
GSPKKKRKKAKEEAASDGTEPCPQLTNTEESTRNSADTTAVQDSSVQETEKNSVDGTQNA
E
NT seq
8286 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctttttaatgggggcagacactgctctagcttaccccagtgaggttcgatat
cagccttctacttcaaagacttccaaacagcctctgatacccagtgcctcaccagttggt
gaacatgcattacagctctctcacagcagcaccaaggaccaaccaagcccctacagtcca
gccagcagtccagaagctgctggtcatctgatcgagaccagcagcaagaaagttgtacat
ggtacacagttggaagtgagtgtggaccaaccactgcctcttaccaaggctgaggatgtc
agtacaggggttaagaaaaaaagaaagaaaaaagaaccaaaggaggaagcaggtggtgaa
acagtaacagacgcacccaaaccaaagaagaagagaaaggagcccaagggtgataaagaa
acaaaagagggcaaaggagcaaaagagcccaagggctctaaagggtcaaggaaccgtgga
gagcctaaagaacctaaaggtaccaagggggccaaagagctgaaggaatctaagggtgct
aaggaactgaagcagctgagagagccaaaatgtaaatccaacaccacacccaaatccaag
agcagcaagaaagccagcaaagaacaaggcccaacaccaactgaaaagaagaagaaaggg
aaaaggaaaaatggtgttcctgtggagaattctgaacaggagcattcagcagagaaggca
cctttggctacagaggagctgacagatgctcagaagcgacgatcaggccgtcaagtaaaa
cgaaggaagtacaatgaagacttggacttcaaagttgtcgatgatgccggtgaaacaatt
gctgtactgggaacagggcggatttctccgaactctggctcctcacagaaaggaaaccag
acgacggaaagtcaggaggaggatgagtctgctgtcattgagaagattctggctcagcga
ataacacagagagagacccctgatgggaccacacaggaggtggaagaattctatgtcaaa
tacaggaattactcgtacctgcactgtaaatgggccacggtggaggagctgcagaaggat
aaaaggattcaccagaagatcaagcgtttcagagccaagcaggcacagatgaagaatctt
tttgttgagcctgacgaggagccctttaatccagattatgtcgaggttgaccgaatcttg
gatgtagcacatacaatagactctgaaacgtccgagcctgtgactcattacttggtgaag
tggtgctccctaccctatgaagaaagcacttgggagctggtggaagacatcgacccagta
aagatacaagaatatgaggagttgcagattgtgcctgaaatcacacatgtggaacgtcct
cccgctgaaacatggaagaaaatggagttgtcacggccatacaaagcagacaacagactc
agggaataccagctggagggaatgaactggctgctcttcaactggtacaacagaaaaaat
tgcatcctggcggatgaaatgggtctggggaagacaatccaatcaattacatttctgtat
gaaatatacttgatgggaatccggggccctttcctcattattgcacctctctccacaata
gccaactgggagcgggagttccgcacgtggacggaggtaaatgtcatcgtataccacggg
agtcagatcagtcggcagatgattcaccagtatgaaatgcactacaaggactctgagggt
gttcccatccagggaattttcaaattcaatgcaataattaccacctttgaaatgatcttg
gctgactgtcctgagctgcgaaaaatccactggagttgtgtgatcattgacgaggcccac
aggctgaagaacaggaactgtaagctgctggagggtctcaagctcatggctctggaacat
aaagtccttctgactggaactcctttgcagaacacagtggaagagcttttcagcttgtta
aattttctggaacctgttcacttcccttctgagtctaccttcatggaggagtttggagac
ctgaagactgatgagcaggtgaagaagctgcaggctgtgctgaaacccatgatgcttcga
agactgaaggatgatgtggagaaaaatctggctccaaaggaggagaccattattgaagtg
gaactgaccaacatccagaaaaaatattacagggccatcctggagaggaacttctctttc
ttggccaaaggggctaaccaggctaacatgccaaacctgctgaataccatgatggagctg
agaaaatgctgtaaccacccctacttgataaatggtgctgaagagaaaatcctggatgaa
ttccgtgaggtgcacaatcctgaggctcctaatttccagcttcaggccatgattcaggct
gcaggaaagctggtgttgatcgataagcttctgcctaaactgattgctggcgggcacaaa
gtgctcatcttctcccagatggttcgctgcctggatatacttgaagattacctcatccac
agacggtacacctatgagcgaattgacggccgggtgagggggaacttgagacaagctgcg
attgatcgcttctccaagccagactccgaccgctttgtgtttctgctgtgcaccagggca
ggtggtcttggaattaatctgactgcagcagatacctgtatcatcttcgattcggattgg
aaccctcagaatgacttgcaggctcaggctcgctgtcaccggataggacagagtaaagcc
gttcaagtgtatcgcctcataacccgtaactcatacgagcgagaaatgtttgacaaggcc
agccttaagctgggtctggacagagctgtactgcaagcaatgaatcgtagaggaaacact
aatggggtgcagccattgtctaagattgaagttgaagacctacttcgtaaaggagcgtat
ggagccctaatggatgaggaggatgagggctcaaagttctgtgaagaagacattgaccag
atcctgcttcgccgaacacgcactatcaccattgaatcagaagggaagggctccactttt
gcgaaggccagcttcgtagcttcaggaaacaggacggatatctccttagatgatcccaac
ttctggcagaaatgggctaaaattgcagagctggatatagagtcgaaaaatggaaaagac
agcttggtcattgacacaccacgcatcaggaagcagaccaaacactacaactcatttgag
gatgatgaattgatggagttctctgagctggacagtgacagtgaagataaaccttcaagg
tctcgtcgtcttcacgacaagacccgtcgctatctccgggcagaatgctttcgggtggag
aagaacctgttgatatttgggtggggccgatggaaggacattttgtcacatggacggttt
aaatggcacctgacagagaaggacatggagaccatttgtcgcaccctcctggtatattgc
ctgaagcattataagggcgacgagaagatcaaaagcttcatctgggaccttataactccg
acaaaagatggacagaatcaggcactacacaatcactcagggctgtcagcacccgtgccc
agggggagaaaagggaagaagatgaagacgcctctgtcacagccggagctgaagaatgct
gactgggtggctagctgtaacccagaggtgctcttccacgatgatggttacaagaaacat
ctcaaacagcactgcaacaaggtcttgctgagagtccgaatgttgtattatctcaagcag
gaagtgctgggggaggctgctgataaagctttggatggtattgatgcaagtaagctggaa
gtctggattcctgaggttgactacaacgatataccagtcgactggtgggatggagactca
gacaagtccctgctcattggcgtttataaacacggttatgaacgatataatgccatgaga
gctgacccagcactctgtttcctcgagagggtgggcatgcctgatgagacctcgctggct
gctgagcaaggaggtgtcgacctgtcagcagacatgagcgaaggggttgacctttgtaaa
ggtgaagactctgagctaaagtctgatggacagtttaaagaccagccagatgaggacgca
aactcctgcattgaatctgcaattatggagaaaggagaggattcaattttaggtcaggat
ggtacagacattgaccgtccacagtggccagttgcatcggtgctcacagcccgtcttcgc
cgcctcataaccgtctaccaacgctgcaatcgcaaggagctggtgaggatggaatcgctg
gctcgcaataaccaacgtcgctggtatcggcaggatgagatctggggaaggataccagaa
atggacattattaacatggaagtccagcaaaggtggacaaggagggagcagacagatttc
taccgtgtagtctcgacatttggtgtggtatatgatccagacaagaagcagtttgactgg
aaccagttccgcagttttgccaggttggagaggaaaacggacgggagtctggagaggtat
ttccgaagcttcgtggctatgtgccgaaatgtttgcaggctgcctcaaaggaaggacgag
gcttcagacccaaacatctttgttgagcctatcactgaagaacgagcttcaaggactctg
taccggatagagttgctgcgcaaagtacgggaacaagtcctccggagcccacagctgaat
gaacgtctaaaactctgccggcccagtctgtacctgcctgtgtggtgggaatgcggtaaa
catgaccgcgacctcctggttggcactgccaagcacggtctaagcaggacagactactac
atcctgaatgatcctcagctttccttccgggaggcgcacagaaactacgtgcagaatggg
agcacctacttccagagcgtgccagcaccctgcagccagtcgtccctcaacttcagccag
tcagcttcacctgcgtccaccgtgctcactctgggggagaaggacaacatagagcagatg
gatgtggagcaggagaagatggaggaggctctgaatgattcaagctcccaggcaggaata
atgggcgactgctcagaagtgaagaatgaagagaatgctgctgactctggaaccaagtgc
agctctgcccaagctgacttggtggtggtgggcaatgactgggtagctgtcaactgcaca
cagaccaagtgttacactgtgccaaaagcacacgccaaggaggtaaatgacacaggtggt
atctgtgcagaggctgatgcagtagaaagttcacagcagcctgtgcttgaaccttgtagt
ggtgcagttcctacactagtgagaaatttgcagcctgtctgtgctggtgttgccctgtca
ccagtgaactgcgtaaacgtgctgcaggtgaaatccaatggtgtgatagaaatgcagcct
gtaggtgaggagccagtggatagctcagcaccagtatgtggtgctgcgggaatgcagtct
ttgttggaagcagcccatgggaccaccttgaagtgcaacctcatacagaacatgcagata
aaagaggaaaatgaatgtatagtggctcagaggtcaacaggtgttaccgatggtgagagc
cccatgagtgaacacatttacaacatgcagattgactgtccaagcatgtgtcatacagag
actacaaccaattgcaccgataaaatgtggagccaagctagccagatggccgaatcaaac
tcgtcagctgctgtgcccactagttcgggagcagccaatggcttcaagctgactgaagtg
gtttcaggcagcagtcagcaaggagtggctgtgggtgaggctaactcagcagagtcggtg
gggatcctgactgttgcaaaggctgaatcagaccagctggactttgaggcagttaccaca
aaaagcctgctaagcagaacacagtcgcttggaactgtgtactcggcagtgaaggcagcg
gaagatgagccagaatcatcatcagccccggaaggcactgttcccttaaagagggagctg
acagtgaggcatctcctcgaggactgcacgaaggacagtctctgtgaaacagaagagaag
tctgaggaagataattcacaacctgaagccatcccactgaagaactttgatgaggagagc
aatacatctaccagcctggtccaagatgagatccaagacaccctccttcatgatatccga
gaaccgaccattgctcagctcttacaggagaaaactctgtactcttcagctgagtggccc
aaggatcgagttatcataaatcgtattgacaacatctgtcacgccgtgctgaaggggaaa
tggccgtcagcacagcaacagaacctggaacctgctggtgtgatgtattccatggcggcc
ccagcagagactctgaacgtgaggagctgcctcagtgtccccttgcaggctgcacacact
ctcagctttgctgacagctctgtctcctcccatcattttgcaaagcaggagagcttactt
gcattaacgttcccgagggatcagaggaggagaaggcggaaatacgagtttgagacagat
cgaggtgcaaagaggaagagccaggaggaggctgtccctgttctcactcgctctcctata
attttcaatgggtggcaggaaactgccatggacctttcaaaggcatctgaagaggcgcct
ggctctgtgccagtcattattagtacaagcaccccgaagttgggctcactggacccctcg
actgctttcagggcggacatggccggtatcctgcaggcaggcctcgtccatccagtcaca
ggacaggtgataaacggcacctgtagaggagatgactcatcgaggaggaggagagggcga
cgaaagaatgttgaaggtgttgatatcctcttcatgaaggagaaaaagccagagaatctg
gacacgggcctatcgaagcagcttttttccggggcagctcactcggctgacaacatggcc
agtatgatgattaaactccctcagggcaagcaacaactggcaaatgaggaagaagagaaa
aacaagagtctgattgagtggttgaggcagcatcccacatacaccatggatgtgtccaac
ctggctcctaattgcactgcaattttacatggcctttcagagcggccgaagcagaggagg
catcgctgcaaggaccccagtaaactggacatcaattcgctgactggggaggaaagggta
cctgttgttcataagggaagtggaaggaagctgggaggtgctatggccccactgatgaaa
gagctggcaaggtggctggatgcaaacccagagtatgctgtggcgcccgagtgggctgaa
attgtgaagcactcgggctttctaccagagaacaagttcagtcgtatcctgactgagcct
gtggtgaaagaggctggtgccagaaagcgggggcggagaccacggagtgaaatggtcaaa
cccggcggggttgtcggtgacaccacctcagcaatgggaccaatgttcatgaacgggctt
atcgctgggatggatctagtgagccttcagaacttcagaaatattcataaccttcagctg
gccggactgatggggtttccagctggatttgctgcaatcccttctggagaggacggcaag
aacagcctgaacatgttgcccatgatgttgcctgggatggctggaatgtcccatgtgttc
ggggtagggggattactgaacagcccatcggtggtatcaggtaccagcacttcatgtacg
tccacactgaccacaagtgtttcttcgaaagcgagtaaaggcagcgaacagcagggcagt
gctgccgagtcgaggaaacacgaggaaggttctctgtcagcagagaagccaggtccgagt
acatctttccctgactctggggaagccagagttaccaccagcaatgtgttgcccttcaac
ccattcctactgcacagtatgcctgctggattaatttacccttccatgttccttccacat
ggtgtcggcatggcaatgcctggctttgcgcaagcaggacacactgagggagacagcact
ggaagcccaaagaaaaagagaaagaaagccaaggaagaggctgcaagtgatggaactgaa
ccctgcccacagctaacaaacacagaagagagcacgagaaactcggcagacaccactgct
gtacaggacagttctgtgcaggagactgagaaaaactctgtagatggtactcagaatgcc
gagtag
DBGET
integrated database retrieval system
