Hemitrygon akajei (red stingray): 140736745
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Entry
140736745 CDS
T11019
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140736745 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140736745 (gtf2b)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
140736745 (gtf2b)
Prokaryotic type
Archaeal type
TFB
140736745 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
ORC6
Motif
Other DBs
NCBI-GeneID:
140736745
NCBI-ProteinID:
XP_072918731
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All DBs
Position
12:complement(17609707..17636090)
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AA seq
316 aa
AA seq
DB search
MASCSRGDPLPRVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDAQNPLLNGGDLSTMIGKGTGSASFDEFGNAKYHNRRTMSSSDRAMMNAFKE
ISNMSDRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRIPKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASADKRTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PAEFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtgtagtcgtggagatccattacccagagtgcagtgtccaaaccatccagat
gccatactggtggaagattaccgtgccggtgatatgatctgtccagaatgtggactggtt
gtaggtgatagggttatagatgttggctcagaatggcgaacatttagtaatgacaaagca
acaaaagacccatctcgagttggtgatgcccagaatccactgctaaatggtggggatttg
tcaacgatgattgggaaggggactggatcagcaagctttgatgagtttggaaatgcaaaa
taccacaatcgtcggacaatgagtagctctgatcgagcaatgatgaatgcatttaaggaa
atcagcaatatgtctgataggataaatctgcccaggaatatagttgatcgaactaataat
ttatttaaacaagtctatgaacagaagagcctaaaaggaaggagtaatgatgccattgcc
tctgcctgtttgtatattgcctgcagacaagaaggtgtgccacggacgttcaaagaaatt
tgcgcagtgtccagaattccgaagaaagaaataggccggtgcttcaagctaattctgaaa
gctctggaaaccagcgtggatctaatcacaacaggagactttatgtctcggttctgttca
aacttgggattgcctaaacaggtacaaatggctgcaacgcatatcgcaaggaaagccgtg
gaactggacctggtccccggcaggagccccatttcagttgctgcagcagcgatttatatg
gcatcacaagcttccgcagacaaaaggacgcagaaagaaattggagacattgctggtgtg
gctgatgtcacaattaggcagtcgtacagactcatctatccacgggcagctgaccttttc
cctgctgaatttaaatttgatactccggtggacaagctgccccaattataa
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