Hemitrygon akajei (red stingray): 140736849
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Entry
140736849 CDS
T11019
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140736849 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haka03400
]
140736849 (rad54l)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
140736849 (rad54l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
140736849
NCBI-ProteinID:
XP_072918941
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Position
12:32007440..32064447
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AA seq
741 aa
AA seq
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MRRSLAPSQLAKRKPGDSSDEEDVNTKRRKLGSERNNIENFISPFRKPLAQLTNRPVCLD
SSQHEAFIRSILAKPFRVPIPNYTGSLGLKALGIKRAGARQSLHDPYEEGALVLFEPPPL
SAHDQLKADKDKLPVHVVVDPILSSVLRPHQREGVKFMWDCVTGRRIVDGYGCIMADEMG
LGKTLQCISLMWTLLRQSPEAKPEIGKVIVVTPSSLVKNWYNEVEKWLAGKLQSLAIDGG
TKAEIDKKLAMFMSQQGLRIQTPILIISYETFRLHADVLCRGPIGLVICDEGHRLKNSDN
QTYQALNNLNAKRRVLISGTPIQNDLLEYFSLVHFVNAGILGTVQEFKKRFELPILKGRD
ADASENERLCGEEKLKELISVVNRCLIRRTSDILSKYLPVKIEQIVCCRLTPLQLELYKL
FLKQAKPALEVEQAHNGKISISSLSSITSLKKLCNHPALIYEKCVEGEGGFRGAFDLFPP
GYSTKSVEPQLSGKMLILDYILAMTRSTSSDKVVLVSNYTQTLDLFEKLCRDRRYLYVRL
DGTMTVKKRAKIVERFNNPANPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQA
MARIWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKE
LFTLNENTASDTHDRLKCRRCVNGHQVRPPPEDSDCTSDVSQWNHCENKRGLRDTVLHSA
WDAAVSFVFHHQSHEEQRGVI
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaagtcttgcaccaagtcagcttgctaagcggaagccaggagattcctccgat
gaagaggatgtgaacacaaaacggcggaagctgggatccgagcgcaacaacattgaaaat
tttatatctccattcaggaaacccctagcacagctaaccaatcggcctgtgtgcctggac
agcagtcagcatgaagctttcattcgaagtatcctggccaaacctttccgagtgcctatt
ccaaattacacaggttctcttggattaaaggccctcgggattaaacgtgcaggagccagg
caatcacttcatgatccatatgaagaaggtgctttagtactttttgaacctccgcctctt
agtgcacatgaccagctaaaggctgacaaagataaacttccagtacatgtggtggtagat
ccgatcctgtcttctgtcctaagacctcatcaaagagaaggtgtgaagttcatgtgggac
tgtgtgacgggtcgacgaattgtggatggctatggctgtattatggcggatgagatggga
ctgggcaagactttgcagtgtatttcactaatgtggacactcttgcgacaaagccctgaa
gccaagccagagatcggaaaagttattgttgtgactccatccagtttagtaaaaaactgg
tataatgaggtggagaagtggctggcagggaaattacagtccctggctattgatggagga
actaaagcagagatagacaagaaactggccatgtttatgagccaacaagggttgcggatt
caaacgccaatcctaataatttcttatgagacgttccgattacatgctgatgtgctttgc
agaggtcctattggtttagtcatctgtgatgaggggcataggctaaagaattcagacaat
cagacatatcaggcattgaacaatctgaatgccaagcgtcgtgtgttgatctcaggaaca
ccaatccagaatgacttgctagaatatttcagccttgttcattttgttaatgcaggaata
ctggggactgtacaagaatttaaaaagcggtttgaattgcccatcttgaagggtcgtgat
gcggatgcgagtgaaaatgaaagattgtgcggtgaggagaagctgaaagaattgatcagc
gttgtgaataggtgtttgattcgaagaacctcagatattctctccaaatacttgccagtg
aagattgaacagattgtctgttgcagactcactcccctgcagttagagttgtacaagttg
ttcttaaaacaagccaaaccagcattagaagtggagcaagctcacaatgggaagataagc
atttcctccctgtcttcgattacctcgctaaagaaactttgtaaccacccagcgttgatc
tatgagaaatgtgttgaaggtgaaggaggatttcgaggagcatttgatctctttccacca
ggatacagtacaaaatctgtggagcctcagttgtctggcaaaatgcttattcttgactat
atcttagccatgactcgaagtaccagctctgataaggtggttctggtatcaaactacaca
caaactcttgatttatttgagaagctctgcagagataggagatacctttatgttagactg
gatggtacaatgacagtaaaaaagagagccaagatagtggaacgtttcaataaccctgcg
aaccctgaatttatattcatgttgagtagcaaagctggtggatgtggcttgaatttaatt
ggtgcaaaccggttggtcatgtttgatccagactggaatccagctaatgatgagcaagcg
atggctcgtatatggcgagatggacagaagaagacttgctacatttacaggcttttatcg
acagggacaatcgaggagaagattttccagcgtcaaactcacaagaaggcactgagtagc
tgtgtagtggatgaggagcaagatgttgaacgacacttctctcttggagagcttaaagag
ctctttactctaaacgagaacacagcaagtgatactcatgataggctgaaatgtcgtcga
tgtgtgaacggtcaccaggtgcgcccccctcccgaagactcagattgcacatcagatgtc
tctcagtggaatcactgtgagaataaacgtggactacgcgatacggtccttcattcggcc
tgggatgctgcagtctcctttgtgtttcatcaccagtcccatgaggagcaacgtggagtt
atctga
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