Hemitrygon akajei (red stingray): 140736903
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Entry
140736903 CDS
T11019
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140736903 (rnf220a)
Enzymes [BR:
haka01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140736903 (rnf220a)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140736903 (rnf220a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Pox_A_type_inc
Endonuclease_7
zf-RING_UBOX
zf-Nse
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
140736903
NCBI-ProteinID:
XP_072919017
LinkDB
All DBs
Position
12:complement(37975406..38428729)
Genome browser
AA seq
619 aa
AA seq
DB search
MDLHRTAFKMENSSYLPNPLASPALMVLASTAEASRDASISCQQPRPFGVPVSVDKDVHI
PFTNGSYTFASMYHRQGGVPGAFPNRDFPPQLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASAEDRDSYQSAFTPAKRLKNCHETESPHLRFSDSEGKEYEFTAQLPSSSPSSLKLD
DSGKKVFAVSGLISDRENSASPEESRNERCKKKATLYDTQAPICPICQVLLRPSELQDHM
EQELEKLTQSNLCKHSMLKDSTLQGTVKPLSTTADLHNTLSSSTERRKGGREQSVLLSAP
IKREGESPTASPLSADDTHHSDRYQTFLRVRSNRQARLNARIGKNKRKKASEDGQVCPLC
NETLSGSMEEMSRHVEACLDKRDGSYTNDDESVDIENESASGNRFEEYEWCGQKRIRATT
LLEGGFRGSGFVTCSSKENHDSDADLDVDGDDTLEYGKPQYTEADIIPCTGEEPGEAKER
EALRGAVLNGGTPSNRITPEFSKWASDEMPSTSNGESGKLEMQTQKTCKNSEIEKISEDA
TVTTIEALKARIRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRTLGAKK
LCPQCNTITSPGDLRRVYL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacttgcacagaacagctttcaagatggagaattcttcctacctccctaaccccctt
gcatctccagctttgatggtccttgcctccacagcagaggctagccgagatgcctctatc
tcttgccagcagcctagaccttttggagtacccgtctcagtggacaaagacgtccacatc
cccttcaccaatggttcgtacacctttgcttccatgtaccatcgtcagggtggggtgcca
ggggccttcccgaaccgagatttcccccctcagctgttacatctgcatcctcaatttgca
cctccaaacctggactgtacccccatcagcatgttgaaccatagtggtgttggggcattc
cggccttttgcctccgctgaagatagagacagttatcaatctgcctttacgcctgccaaa
agactaaagaactgccatgaaaccgaatccccccatctgaggttttcagactctgagggc
aaggaatatgagttcacagcccagctcccatccagttcccccagctctctaaagctagat
gactctggaaaaaaggtctttgctgtgtcaggtctcatctctgaccgagaaaattctgca
agccctgaagaaagtcgaaacgaaagatgcaagaagaaggcaactctgtacgatactcaa
gctccaatatgccccatctgtcaggtactgctccgtccaagtgaactacaggaccatatg
gaacaagagctggaaaagctcactcaaagcaacttatgtaagcactccatgttgaaggac
agcacactccaagggactgtgaagcctcttagcacaactgctgacctgcacaacaccctt
tcttcaagtacagaaagaagaaaaggagggagagaacagtcagttttgctatcagcacca
attaaaagggaaggggagtcacctacagcgtcacctctctctgcagacgacactcatcac
tccgacagataccagacatttttgcgagtaaggtccaacaggcaagcaaggctgaatgca
cggatagggaaaaacaagaggaagaaggcctcagaggatggccaggtatgtccactatgc
aatgagacgctttctggatctatggaggagatgagtagacatgtggaagcctgcctggac
aagagagatggttcttacacaaatgatgatgaatctgtggacatagaaaatgagagtgca
agtgggaacagatttgaagaatatgaatggtgtgggcagaagagaatacgcgctacaacc
ttattagaaggtggttttcgaggatctgggtttgtcacctgcagcagtaaagaaaatcat
gacagtgatgcagatcttgatgtggatggagacgacaccttggagtatgggaaaccacaa
tacacagaagcagatattataccatgcactggagaagaaccaggggaggccaaagagagg
gaggcactacgtggtgctgtgctaaatggtggaactccaagcaatagaataacaccggaa
ttttccaaatgggccagtgatgaaatgccctcaacaagtaatggagagagtggaaaacta
gaaatgcagacacagaagacatgtaaaaacagcgagattgaaaagatatcggaagatgca
actgtaacgacaattgaagcactgaaagcccgcatccgtgaattagaacgacaactgtcc
cgtggggatagatataaatgtcttatttgtatggattcctactcgatgccccttacatca
atccagtgctggcacgttcattgtgaggaatgctggctcagaacattgggtgccaaaaag
ctgtgtccacagtgcaacacaatcacatcccctggagatctcaggcgcgtgtatttgtga
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