Hemitrygon akajei (red stingray): 140737314
Help
Entry
140737314 CDS
T11019
Name
(RefSeq) LOW QUALITY PROTEIN: probable voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04010
MAPK signaling pathway
haka04020
Calcium signaling pathway
Brite
Ion channels [BR:
haka04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
140737314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
140737314
NCBI-ProteinID:
XP_072919845
LinkDB
All DBs
Position
12:complement(98091969..98711828)
Genome browser
AA seq
2308 aa
AA seq
DB search
MWSSDALRERAVVGSCCRAAPCPTGGSVRLSGGARALAATSADPRSPGKRRARAHQRLAG
RRFDPSRGRTDGSVWGSSERFVCRCQPGAGKEPPPGAGEWGNGRSGRRSGSSSSGGSSSG
GTXGSAGFKQSRAQRARTMALYNPIPVRHNCLTANRSLFLFGEDNIIRKSARRVIEWPPF
EYMILATIIANCVVLALEQHLPNGDKTPMARSLEQTEPYFIGIFCFEAGIKIVALGFVFH
KGSYLRNGWNVMDFIVVLSGLLATAATHFNLRTLRAVRVLRPLKLVSGIPSLQIVLKSIM
KAMVPLLQIGLLLFFAILMFAIIGLEFYYGKLHHTCYTDGAVAEELEFQFPCGTQEPARL
CPNGTFCSYWIGPNDGITQFDNILFALLTVFQCITMEGWTTILYNTDDALGAMWNWLYFI
PLIIIGSFFVLNLVLGVLSGEFAKERERVENRRSFLKLRRQQQIERELNGYRAWIDKAEE
VMLLEENKNAGEKSALDVLRRATIKKGRMDMIHTESSDDHYTEISSVGSPLARASIKSTK
LLEGSSYFRRKERMLRISIRHMVKSHAFYWIVLGLVALNTVCVAIVHYDQPLWLSNFLYY
AEFTFLGLFLSEMFLKMYGCGPRLYFHSSFNCFDCGVIIGSIFDVVWTIIRPETSFGISV
LRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN
FEEGTPPTNFDTFPAAIITVFQILTGEDWNEVMYNGIKSQGGVNSGMWSSVYFIVLTLFG
NYTLLNVFLAIAVDNLANAQELTKEEQEEEEAINQKHALQKAKEVSPMSAPGFPSTEREF
RRHKHMSIWEARTSQLRRRMQMSSREALFAEALQGLEGSRYRRHRSRVFEGESLWRLGDL
QARDADQLGEGGKREAFKSRSLRNNWQPAEPSKEDSSIKVNGDQDHRQGRTLGRSIEARQ
SFRMAEPVRAKRRYRSLYKEAKLGLEESAETTLSHRASKSKEEGLLQRLPEEQESSQSAH
GPEEKDAQQPMKAFSWQGKPHTSSTNRTVGADTSSSSRQVEKDCTRVPESEKVDNAKNSK
QVNEQTSLLNMQLDLQTTQTSPGEKELTTSSRDIEQDKAREQTEIDIDCENTETPMDSLV
TPGNVCSSSSSVKDEEKKSKAIIPYSSMFLFSTTNPVRRACHFIVNLRYFEMCILLVIAA
SSVALAAEDPINKDSARNQVLKYFDYVFTGVFTFEMVIKMIDIGLIFHEGSYFRDVWNIL
DFIVVSGALVAFAFTGSSGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNV
FNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKMTKEECRGQFVLYETENKVVDREWKR
YDFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEADQGPIPGNRMEMSIFYVVYFVVF
PFFFVNIFVALIIITFQEQGDKMLEESSLEKNERACIDFAISAKPLTRYMPQNRQTFQYR
VWHFVVSPSFEYTILTMIALNTVVLMMKHHSPPPGFVSVLKLMNIAFTITFTLECILKII
AFGFLNYFRDSWNVFDFVTVVGSISEIIVTECNLKFVNLSFLKLFRAARLIKLLRQGYTI
RILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNIGLDDHTPINRHNNFHTFFNAL
MLLFRSATGESWQEIMLACLSGKECEGTREPTCGTDFAYFYFVSFIFLCSFLMLNLFVAV
IMDNFEYLTRDSSILGPHHLDEFVRAWAEYDRAACGRIHYTDMYQMLTLMSPPLGLGKKC
PSKVAYKRLVLMNMPVTEDKTVHFTSTLMALIRTALQIKLARGGADKQQLDAELRKEIMT
IWPHLSQKTLDLLVPMHSYTDLTVGKIYAAMMIMDYYKQSKNKKYQKLQEEQSRTPMFQR
MEASSLPPQIISSSKGLPFLQADRGPDLDSRSEFAPLVPLPPVMFQQGRTSSQGEEIHNQ
RPKELKKVKVEYPHYGHYLPIENQGRAVSMPRLETESESTEDPSPMKRSFSTFTANHTNS
TWLNEYSLERAGPEDLYQKWSRRHLRSSVRSSNAGSHERGRSKERKHLLSPERSLCNSEE
RAQHLQHPQHPCQDQRMSRSPSPGYSHSVQEQVKSESPIPSTSGTSTPKHGRRQLPQTPT
KPRPHISYSPVAQRPDTLSPPSSQATPRSREARYQSLRVQPNKTLWTESPGLSKKTDSQH
STPLRYISEPSLTLHDDLGSLDQTLGEETLTFEAAVATSLGRSHTISSAPPLRHSWQLPN
GSYRTRVVRCGATTGPDPFTDTDEDDKC
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagcgacgctttgagggagcgggctgtggtgggcagttgctgccgtgccgca
ccttgtcccacaggcggcagtgtgaggctgtccgggggcgccagggcgctggctgcgacc
tcggcggatccacggtcacccggcaaacggagagcccgcgcacatcagcgcctggctggt
cgcaggttcgatccttcgcggggccgcacagatggctcggtttggggaagcagtgagcgg
tttgtctgccgatgccagcccggagcagggaaagagccgccaccaggtgccggtgagtgg
ggaaacggccgcagcggccgccgcagcgggagcagcagcagcggtggcagcagcagcggc
ggcacanngggctcggctggtttcaagcagagccgggcacagcgggcacgcaccatggct
ctctacaaccccatccctgttcgacacaactgcttgaccgctaacagatccctcttcctg
ttcggagaggataacatcatcaggaagtcagccagaagagtcatcgaatggcctccattt
gaatacatgattctggctacaatcattgccaactgtgttgtgctggctttggaacagcac
ctgccgaatggagacaagacccccatggctcgaagtttggaacaaactgagccatatttt
attgggatcttttgctttgaagctgggattaaaattgtagcactgggatttgtattccac
aagggatcgtatcttcggaatggctggaacgtaatggatttcatcgttgtcctgagtggg
ctcttggccacagcagcaacgcacttcaacctccgaactctgagggcagtccgtgttctg
agacctctgaagctggtgtctgggattcccagtttgcagattgtgttgaagtccatcatg
aaagcaatggtacctctgctgcagattggcctgctcctcttctttgccatcctcatgttt
gccatcattggcctcgagttctactatggtaaactgcaccatacctgctacacagatggc
gccgtagcagaagaactggagtttcagtttccctgtggcactcaggagccagctcgtctc
tgcccaaatggcactttctgttcatactggatcggacccaatgacggcatcactcagttt
gataacatcctgtttgcactgctgactgtcttccagtgcatcaccatggagggatggacc
accattctctacaatacggatgatgccttaggagcaatgtggaattggctgtacttcatt
ccgctcatcatcattggctccttctttgtgttgaaccttgttctcggagtgttgtctggt
gaattcgccaaggagcgggagagggtggaaaataggaggtcgttcctgaagctccggagg
cagcagcagattgagcgggagttaaatggatatcgggcctggatcgacaaagcagaggaa
gtgatgttactggaagaaaataaaaatgccggagagaaatcagccctggacgtccttaga
agagcaacaatcaaaaaaggccgaatggatatgatccacacagagtcaagtgatgatcac
tacactgaaatatcttctgtggggtctccgctggcaagggccagcattaagagcaccaag
ctattagagggttcatcttacttccgccgcaaggagcgcatgctacgcatctccatccgt
cacatggtcaagtcacatgccttctattggattgtcctgggtctggtggcccttaacaca
gtgtgtgttgctatcgtccactatgaccagcccttgtggctctccaatttcctatactat
gctgaattcacctttctgggtctctttctgtccgagatgtttctaaagatgtacggctgt
ggtcctcgactttattttcactcctccttcaactgttttgactgtggggttattatcggc
agtatatttgacgtcgtgtggacgataattcggccagaaacatcatttggcatcagcgtt
ctccgtgcattgagattgctccgaattttcaaaatcacaaagtactgggcctctctgcgg
aacctagtagtctccttaatgagctcgatgaaatccatcatcagcctcctgttcctcctc
ttcctcttcatcgttgtatttgctcttctggggatgcagctgtttggtggtcaattcaac
tttgaggaaggtacacctccaaccaactttgacacttttcccgctgcaatcatcactgtg
tttcagattttaacaggtgaagattggaatgaggtgatgtacaatgggataaaatcacaa
ggaggagtgaactcaggaatgtggtcttctgtatatttcattgtcctcacactcttcggc
aactacaccttgctgaatgtgtttctggcaatcgcagtcgataatctagctaatgcccag
gaactgaccaaggaggagcaggaagaggaggaggccatcaaccagaaacatgctctgcag
aaggcaaaggaagtcagccccatgtctgccccagggttcccctctacagagagggagttc
cggaggcacaagcacatgtctatctgggaggccagaaccagtcagctgagacgacggatg
cagatgagcagccgcgaagcgctgtttgccgaggcactgcaggggctggagggcagcagg
tatcggaggcatcgttccagggtcttcgaaggtgaaagtctctggcggctgggtgacctg
caggccagggacgctgatcagctcggagagggcggcaagcgagaagccttcaaaagtcgg
tcactccgcaataactggcagccagcagagccgagcaaggaagactcctcaataaaagtg
aatggagatcaggaccaccggcagggacgaactctcggccgcagcattgaggctaggcag
agcttcagaatggccgaacctgtcagggccaagaggaggtacaggtccctctataaggaa
gcaaaactggggctggaggagagcgccgagaccactctcagccaccgggccagcaagagc
aaggaggaggggctgttgcagcgacttcctgaggagcaggagagcagccaatccgcccat
ggccccgaggagaaagatgctcaacagccaatgaaggcattctcttggcaagggaagcca
cacacaagctctaccaatcgaactgttggtgcagacacaagctcatccagcaggcaagtg
gagaaagactgtaccagagtgcctgagagtgaaaaagttgacaatgcaaagaacagcaag
caggtgaatgaacaaaccagcttgttaaacatgcagctggatctacaaaccactcaaaca
tccccaggagagaaggagctgaccaccagttccagggacattgagcaggacaaggcacgg
gagcagacagagattgatatagactgtgaaaacacagagacacccatggattccctcgtc
acaccaggaaatgtgtgcagcagcagtagttcagtaaaagatgaagagaagaaatccaag
gcgattataccctacagctccatgtttctcttcagcacaaccaacccggtccgcagagca
tgccacttcattgtcaacctgcgctactttgagatgtgtatccttctggtgattgcagcc
agcagtgtggctcttgcagcagaggatcccatcaacaaggactcagctagaaaccaggtg
ctcaagtactttgactacgtgttcacaggagttttcacctttgaaatggtaataaagatg
atagacattggtttgattttccatgaaggctcttatttccgcgacgtttggaacattctg
gatttcattgtagtgagtggagcactggttgcgtttgctttcacgggttccagtggaaaa
gacataaacaccatcaagtctctacgtgttctccgtgtgttacggccactcaagaccatt
aagcgactccctaaactgaaggcagtattcgactgcgtggtgacatcactgaagaacgtg
tttaacattctgatagtctacaaactcttcatgttcatcttcgcagtgatcgctgtacag
ctcttcaagggcaagtttttctactgcacagatagcagcaagatgaccaaagaggaatgc
agaggccagtttgtgttgtacgagactgagaataaagttgttgaccgagagtggaaacgt
tatgacttccattatgataatgttatctgggccctgctgacactgttcactgtctccact
ggagaaggctggccacaggttctacagcattccgtggatgtgacagaggctgaccaagga
ccaatcccagggaacagaatggaaatgtccatcttctacgttgtatattttgttgtattc
cccttcttttttgtcaatatctttgtggccttgataatcatcaccttccaggagcaggga
gacaagatgctggaggagagcagcctagagaaaaacgagagagcctgtatcgattttgcc
atcagtgccaagcccttgacaaggtacatgccacagaaccgacagacattccagtacaga
gtctggcactttgtggtgtcaccctccttcgagtacaccatactgaccatgatagcgctc
aacactgtggttctcatgatgaagcatcattctcccccacctggctttgtgagtgtgctg
aaactgatgaacattgccttcaccatcaccttcacccttgagtgcatcctcaaaatcatt
gcctttggattcctgaactacttccgagactcgtggaacgtatttgattttgtgactgtg
gtgggcagcatcagtgagatcattgtaacagaatgcaatctgaagtttgtgaacctgagc
ttcctgaagctgttccgtgctgcccgcctcatcaagctgctacgtcaaggttacaccatc
cgcatcctcctctggaccttcgtgcagtccttcaaggctcttccatatgtctgcctcctg
attgcaatgttgttcttcatttatgccataattggaatgcagctttttggaaatattgga
ctggatgaccatacccccatcaatcgacacaacaacttccacaccttcttcaatgccttg
atgttgctgttccgaagtgcgactggggagtcctggcaagagatcatgctggcctgcctg
agtgggaaggagtgcgaagggaccagggagcccacctgcggcacagactttgcttacttt
tactttgtctctttcatattcctctgctcattccttatgctgaacctgtttgtggccgtc
atcatggataactttgagtatctgacacgggactcatctatcctaggccctcatcatttg
gatgagtttgtgcgcgcctgggctgaatacgatcgggctgcctgcggccgaatccattac
actgacatgtatcaaatgctgaccctcatgtctccaccgctgggtctggggaagaaatgt
ccttcgaaagttgcttacaagagactggtactgatgaatatgcctgtgactgaggacaag
actgtccacttcacctccaccctcatggccttgatcaggactgcacttcaaatcaagctt
gcaagaggtggagcagacaaacagcagctggatgcagaactgagaaaggaaatcatgaca
atttggcctcatctatcacagaagaccctggacctcttggttcccatgcactcatacaca
gacttaacagttgggaaaatttacgctgccatgatgatcatggactactacaaacagagc
aagaacaagaagtatcagaaactgcaggaagagcagagtcgaacacccatgttccagcgg
atggaagcttcctctctacctccacagatcatctcgagctctaaaggtttgccttttctg
caggcagacagaggacctgacttggatagcagaagtgaatttgcccctttggtaccttta
cccccagtcatgttccagcaaggcagaacatcaagccaaggagaagaaatccacaaccaa
cggccaaaggaactaaagaaagtaaaagtagaatatcctcattatggtcactatctcccc
attgaaaaccagggccgggcagtgtccatgccccgactagaaaccgagtccgagtccact
gaagatccaagccccatgaagcgttcattctccacatttactgccaaccacacaaacagc
acctggctcaatgagtactctttggagagagctggtccagaggacctttaccaaaaatgg
agccgtcgacatctgaggtcatccgtcaggtcttcaaatgcaggcagccatgagagaggc
cgttccaaggagaggaagcacctcctctcacctgagaggtctctctgcaactcggaggag
cgtgctcagcacctacagcacccacagcacccatgccaggaccagaggatgtctcgatca
ccaagcccaggatattcacacagtgtacaggagcaggttaagagtgagagcccaatccct
tccacgtctgggaccagcacacccaagcatggacggagacagctcccacaaacgcccacc
aagccccggccccatatttcatactcccccgtggcccagcgccccgacaccttgtcaccc
ccatccagccaagccaccccaaggagcagagaggccaggtatcagtccctgagagttcaa
cccaacaagacactgtggaccgagtctcctggtctgagcaagaagactgacagccagcac
tcgacgccgctgcggtacatatcagagccctccctgaccctccacgatgatctgggcagc
ctggaccagacccttggcgaggaaacgctcaccttcgaggctgcagtggccacaagcctc
ggcagatcccacaccatctcttctgctcctcctctcaggcactcctggcaactgcccaac
gggagttaccgcactcgagtggtgcgatgtggagcaaccactggccccgaccccttcacc
gacactgatgaggacgacaaatgctaa
DBGET
integrated database retrieval system
