Hemitrygon akajei (red stingray): 140737328
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Entry
140737328 CDS
T11019
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haka02000
]
140737328 (tmc1)
03037 Cilium and associated proteins [BR:
haka03037
]
140737328 (tmc1)
Transporters [BR:
haka02000
]
Other transporters
Pores ion channels [TC:
1
]
140737328 (tmc1)
Cilium and associated proteins [BR:
haka03037
]
Other cilia and associated proteins
Stereociliary proteins
140737328 (tmc1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Ctr
UPF0542
Ac76
Motif
Other DBs
NCBI-GeneID:
140737328
NCBI-ProteinID:
XP_072919864
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All DBs
Position
2:33160160..33197488
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AA seq
760 aa
AA seq
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MAKLKDEVEEKKKLIATLRNKPSPMKQKLQLLKEAQEFVEKFEGALGKGKGKRFYAYKVM
MTKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMVLFGLTFG
LVMIPEALMGKPYGSMPRKTVPKSEQDSAMNFATLWDFGGYAQYSVLFYGYYNHQRSIGW
LKFRLPLSYFLVGIGIIGYSFMVVIRTMASNANEEGSGDDTSFNFSWKMFTSWDYLIGNS
ETADNKFASITTSFKESILEEQENRKEGNIHLTRFLRVLANFLVLLTLAGSGYLIFFVVR
RSQKFAQEGLEDYGWWERNEVNMVMSLLGMFCPMLFDIISPLENYHPRIALQWQLGRIFA
LFLGNLYTFIIALLDEINLKLEEEKVIKYNITIWEQNLYNGTWLENSTARPSIDVDPAIV
PRGPCWETMVGQEFVRLTVSDTLTTVITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYGE
FDISGNVLGLIFNQGMIWMGAFYAPCLPAINVLRLLASMYLQCWAVMCTNVPHERVFKAS
RSNNFYMAMLLIILFLSTLPAVYTIVSIPPSFDCGPFSGKNRMFDVIQETLENDFPAWFA
KVFSAASNPGLVLSFILIMVLAIYYLQTTSKSYKAANLELKKKLQNQSEENKKRSKMNAE
AAASQMEELQNSLNKDSNSETVVEVDKKPSGVNSANQPLTHNASLPNERGMRLAAPPRVA
ITRPPRPRNPGQFQGQPRYPGPHQYYGVRPRIPRGAAAYR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattgaaggatgaagtggaagaaaagaagaaactcattgcaactttacgaaat
aagccctcacctatgaagcagaagttgcaattactgaaagaagcacaggaatttgtggag
aaatttgaaggtgctcttgggaaaggaaaaggcaaaaggttttatgcctataaagtaatg
atgaccaaaaaatggatgaagtttcagcgtgactttgagaacttcaaaactgcttgcatt
ccatgggaaatgaaaataaaagagattgaaagtcactttggttcttctgttgcttcatat
ttcatattcttaagatggatgtacgggatcaatatggttctttttggattaacgtttggt
ttggtcatgatccccgaggctctgatgggaaagccatatggtagtatgcctagaaaaaca
gttccaaagagtgaacaggactcagccatgaattttgccactttgtgggattttgggggc
tatgcacaatattctgtcctcttctatggttattataatcatcagcggtcaattggatgg
ctgaagttcaggcttcctttgagttacttcctggtgggaattggcataataggatacagc
ttcatggtggtgattagaacaatggcaagcaatgcgaatgaggaggggagtggagacgac
acaagttttaactttagttggaagatgttcacaagctgggattacttgattggtaattcc
gaaactgcagataacaaatttgcatccattactaccagctttaaggaatctattcttgaa
gaacaagagaatcggaaagaaggaaacatccatttaaccaggttcttacgggttcttgcc
aatttcttggtgctcctcactctggctggaagtggttacctgattttctttgtcgtcagg
aggtctcagaagtttgcgcaggaaggattggaggactatggatggtgggaaagaaatgaa
gtaaatatggtcatgtcactgctgggtatgttctgtccgatgttatttgacatcatcagt
cctttagagaactatcacccacgaattgcactccaatggcaactgggccgcatttttgct
ttgtttcttggtaatctctacacatttattattgctttattggatgaaattaatctcaag
ctcgaagaagagaaggtaattaaatacaatattactatctgggagcagaatctttacaat
ggaacatggttggagaattcaacagcacgtccatcaatagacgtagatcctgccattgta
cccagaggaccttgttgggagacgatggtgggacaggagtttgtgcggctcacagtttca
gatactttgaccacagtgataactatactgatcggggattttcttcgtgctgtatttgtc
agattttttaactattgctggtgctgggatctcgagtatggatttccttcctatggagaa
tttgatattagtgggaatgttttgggtttgatcttcaatcaaggcatgatatggatgggt
gccttttatgctccatgtcttccagctatcaatgttttacgactcctggcttcaatgtac
ctacaatgttgggctgtcatgtgtaccaatgttccacatgagcgagtgtttaaggcatca
agatccaataacttctatatggctatgttgctgattatcctgtttctgtcaacactgcct
gcagtttacacaattgtttcaataccaccatcttttgattgcggaccatttagtgggaaa
aatagaatgtttgatgttattcaagaaacactggaaaatgattttccagcctggttcgca
aaagttttcagtgctgcgagcaaccctggtttggttctttcttttattttgattatggtt
ttggcaatatattatcttcagacaacttctaagtcatacaaggccgcaaacctggaatta
aagaagaaactacaaaatcaaagtgaagaaaataaaaagagaagcaaaatgaacgctgaa
gctgcagcaagtcaaatggaagaactgcaaaattctttgaataaagacagcaacagcgaa
acagttgttgaggtggacaagaaaccaagtggtgttaattctgctaaccagcctctaact
cacaatgctagtctgcccaatgaaagaggaatgaggcttgcggctcccccacgagtagct
atcacacgaccaccaaggccaaggaatcctggccaattccaaggccaaccgcggtatcct
ggtccacatcaatattatggagttcgcccacggattcccagaggggctgctgcttataga
tga
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